BLASTX nr result

ID: Cimicifuga21_contig00011953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011953
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139385.1| PREDICTED: ankyrin repeat-containing protein...    60   1e-07
ref|XP_002337868.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002512834.1| ankyrin repeat-containing protein, putative ...    56   3e-06
ref|XP_002514840.1| ankyrin repeat-containing protein, putative ...    56   3e-06
ref|NP_001121434.1| transient receptor potential cation channel,...    55   6e-06

>ref|XP_004139385.1| PREDICTED: ankyrin repeat-containing protein At5g02620-like
           [Cucumis sativus] gi|449519004|ref|XP_004166525.1|
           PREDICTED: ankyrin repeat-containing protein
           At5g02620-like [Cucumis sativus]
          Length = 649

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
 Frame = -1

Query: 314 YNHLDCCQEIYARRPSLMYARSNKKSTPLHHAAWYGNPDILKFIIS--------EGVDSD 159
           +N     +EI  R P ++YA ++KK T LH AA  G+  + + +I         + +++D
Sbjct: 61  FNQKSIAEEIIHRHPPILYAMNSKKDTALHLAARLGSFQVAEHLIECAEKCRFGDDLEAD 120

Query: 158 P--EKKLLSMLEINNTTALNYAVDNGKLEAAKLLIETDPKMLGMVNAYGYSPM 6
              +K+LL M+ +   TAL+ AV NG  E AKLL++  P+++   N    SP+
Sbjct: 121 DYRDKELLRMVNLEKDTALHDAVRNGYGEIAKLLVKERPELVMYANGVRESPL 173


>ref|XP_002337868.1| predicted protein [Populus trichocarpa] gi|222869936|gb|EEF07067.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
 Frame = -1

Query: 302 DCCQEIYARRPSLMYARSNKKSTPLHHAAWYGNPDILKFII--SEGVDSDPE------KK 147
           D   +I  R P L++  + K  TPLH AA YG+ +++K +I  +E + SDPE      K 
Sbjct: 63  DFVYKILERCPPLLFQANKKGETPLHLAARYGHANVVKLLIERAEALPSDPESRVTKAKM 122

Query: 146 LLSMLEINNTTALNYAVDNGKLEAAKLLIETDPKMLGMVNAYGYSPMH 3
           +L M      TAL+ A  N +    ++L + DP+     N  G +P++
Sbjct: 123 MLRMTNGERDTALHEAARNNQSHVVEILTKEDPEFPYSANVDGETPLY 170


>ref|XP_002512834.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223547845|gb|EEF49337.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 307

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
 Frame = -1

Query: 275 RPSLMYARSNKKSTPLHHAAWYGNPDILKFII----------SEGVDSDPEKKLLSMLEI 126
           RPSL++ ++++  TP H AA  G P I+ F+I          S G      K+L+  +  
Sbjct: 60  RPSLIWQQNSEGDTPFHVAARVGCPGIVDFLIEQASSSADIESRGNGQFSNKELIERVNG 119

Query: 125 NNTTALNYAVDNGKLEAAKLLIETDPKMLGMVNAYGYSPMH 3
              TAL++AV NG  E  K LI   P++ G VN    SP +
Sbjct: 120 EMDTALHHAVRNGHFEVVKSLIAAHPELTGFVNIADESPRY 160


>ref|XP_002514840.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223545891|gb|EEF47394.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 581

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/102 (31%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
 Frame = -1

Query: 305 LDCCQEIYARRPSLMYARSNKKSTPLHHAAWYGNPDILKFIIS--EGVDSDPEKKLLSML 132
           L   + +    PSL++  +    +PLH AA  G   + + +I+  + ++ + EK+LL M 
Sbjct: 49  LQVAERVIGLCPSLLHKPNYNGDSPLHIAARLGRVRMCRLLINCADLLEVEVEKELLRMQ 108

Query: 131 EINNTTALNYAVDNGKLEAAKLLIETDPKMLGMVNAYGYSPM 6
            +++ TAL+ AV NG  E  +LLI+ D ++  ++N  G SP+
Sbjct: 109 NLDHDTALHDAVRNGHFETVRLLIQQDSQLTRVINKAGESPL 150


>ref|NP_001121434.1| transient receptor potential cation channel, subfamily A, member 1
           [Xenopus (Silurana) tropicalis]
           gi|183986152|gb|AAI66179.1| LOC100158526 protein
           [Xenopus (Silurana) tropicalis]
           gi|403406471|dbj|BAM42680.1| transient receptor
           potential ankyrin 1 [Xenopus (Silurana) tropicalis]
          Length = 1144

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
 Frame = -1

Query: 278 RRPSLMYARSNKKSTPLHHAAWYGNPDILKFIISEGVDSDPEKKLLSMLEINNTTALNYA 99
           + P  + AR + ++TPLHHAA  GN D++  I++E  +       ++ L+    T L++A
Sbjct: 57  KNPGSLAARDDSEATPLHHAAKLGNIDLMLMIVNESAEEG-----INALDSRGNTPLHWA 111

Query: 98  VDNGKLEAAKLLI--ETDPKMLGMVNAYGYSPMH 3
           V   KL+  K+L+    DP    + N Y  SP+H
Sbjct: 112 VQKNKLDCLKVLLCRGADP---NIQNCYRLSPLH 142


Top