BLASTX nr result

ID: Cimicifuga21_contig00011901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011901
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318757.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
ref|XP_002511120.1| DNA binding protein, putative [Ricinus commu...    89   3e-16
ref|XP_002322285.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
ref|XP_002334505.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_002338484.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15

>ref|XP_002318757.1| predicted protein [Populus trichocarpa] gi|222859430|gb|EEE96977.1|
            predicted protein [Populus trichocarpa]
          Length = 1713

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 39/67 (58%), Positives = 50/67 (74%)
 Frame = -2

Query: 201  QLKVLEKYYDRKLLAFFSLTLSVRNNPSVDDYCELWKTWENSGSELTPAECCSFWLCVVK 22
            QL VLEK+Y+ +LL FFS +  VR+NPS DDYC+LWK WE+ G  LT AECC+FW CV+ 
Sbjct: 1386 QLNVLEKHYEPELLLFFSSSFKVRSNPSFDDYCKLWKVWESLGRPLTHAECCAFWKCVMT 1445

Query: 21   QWNSTTK 1
              +S T+
Sbjct: 1446 HMSSKTE 1452


>ref|XP_002511120.1| DNA binding protein, putative [Ricinus communis]
            gi|223550235|gb|EEF51722.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2299

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 38/63 (60%), Positives = 49/63 (77%)
 Frame = -2

Query: 198  LKVLEKYYDRKLLAFFSLTLSVRNNPSVDDYCELWKTWENSGSELTPAECCSFWLCVVKQ 19
            L VLEK+Y  +LL FFS    V++NPS+DDYC+LWKTWEN+G +LT A CC+FW  V+KQ
Sbjct: 1974 LNVLEKHYQPRLLNFFSSEFGVKSNPSIDDYCKLWKTWENTGHQLTHAACCAFWGWVIKQ 2033

Query: 18   WNS 10
             +S
Sbjct: 2034 KSS 2036


>ref|XP_002322285.1| predicted protein [Populus trichocarpa] gi|222869281|gb|EEF06412.1|
            predicted protein [Populus trichocarpa]
          Length = 1692

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 39/67 (58%), Positives = 50/67 (74%)
 Frame = -2

Query: 201  QLKVLEKYYDRKLLAFFSLTLSVRNNPSVDDYCELWKTWENSGSELTPAECCSFWLCVVK 22
            QL VLE +Y  KLL FFS + +V++NPS DDYC+LWK WE+ G  LT AECC+FW CV+ 
Sbjct: 1366 QLNVLENHYKPKLLHFFSSSFNVKSNPSFDDYCKLWKVWESLGRPLTHAECCAFWECVMM 1425

Query: 21   QWNSTTK 1
            Q +S T+
Sbjct: 1426 QRSSRTE 1432


>ref|XP_002334505.1| predicted protein [Populus trichocarpa] gi|222872537|gb|EEF09668.1|
           predicted protein [Populus trichocarpa]
          Length = 1026

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 37/67 (55%), Positives = 49/67 (73%)
 Frame = -2

Query: 201 QLKVLEKYYDRKLLAFFSLTLSVRNNPSVDDYCELWKTWENSGSELTPAECCSFWLCVVK 22
           Q   LE+YY+  LL FFS+  +V++NPS DDYC+LWK WE+ G  LT AECC+FW CV+ 
Sbjct: 715 QFNFLEEYYEPDLLCFFSIAFNVKSNPSFDDYCKLWKVWESLGRPLTHAECCAFWECVMM 774

Query: 21  QWNSTTK 1
           Q +S T+
Sbjct: 775 QRSSRTE 781


>ref|XP_002338484.1| predicted protein [Populus trichocarpa] gi|222872409|gb|EEF09540.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 36/63 (57%), Positives = 48/63 (76%)
 Frame = -2

Query: 189 LEKYYDRKLLAFFSLTLSVRNNPSVDDYCELWKTWENSGSELTPAECCSFWLCVVKQWNS 10
           LE+YY+  LL FFS+  +V++NPS DDYC+LWK WE+ G  LT AECC+FW CV+ Q +S
Sbjct: 4   LEEYYEPDLLCFFSIAFNVKSNPSFDDYCKLWKVWESLGRPLTHAECCAFWECVMMQRSS 63

Query: 9   TTK 1
            T+
Sbjct: 64  RTE 66


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