BLASTX nr result

ID: Cimicifuga21_contig00011895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011895
         (1544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306858.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-37
ref|XP_003570953.1| PREDICTED: LOW QUALITY PROTEIN: probable ara...   162   2e-37
ref|XP_002302040.1| predicted protein [Populus trichocarpa] gi|1...   162   3e-37
ref|NP_001170584.1| hypothetical protein [Zea mays] gi|238006162...   161   4e-37
ref|NP_001045955.1| Os02g0158300 [Oryza sativa Japonica Group] g...   161   5e-37

>ref|XP_002306858.1| predicted protein [Populus trichocarpa] gi|222856307|gb|EEE93854.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  163 bits (413), Expect = 1e-37
 Identities = 77/126 (61%), Positives = 99/126 (78%), Gaps = 1/126 (0%)
 Frame = -1

Query: 563 QVKDIMKTPEELTLCREEDLILDQLVRLTGKGCWCMIIVDDKNQLLGTFADGDLRRILKS 384
           +VKD+MK   EL +C+E DLI+DQLV LT KGC C++++D+ + L+GTF DGDLRR LK+
Sbjct: 215 KVKDVMKKQNELPICKEGDLIMDQLVELTSKGCGCLLVIDEDSHLIGTFTDGDLRRTLKA 274

Query: 383 SAKGFFNLTLGQACIRNPRTVRPDAMAVEAREVMNF-PTPVQFLPVADDNNFVLGIVELH 207
           S +G F LT+G+ C RNPRT+ PDAMAVEA + M   P+PVQFLPV  D+N ++GIV LH
Sbjct: 275 SGEGIFKLTVGEMCNRNPRTIGPDAMAVEAMKKMESPPSPVQFLPVIKDDNILIGIVTLH 334

Query: 206 GLVSAG 189
           GLVSAG
Sbjct: 335 GLVSAG 340


>ref|XP_003570953.1| PREDICTED: LOW QUALITY PROTEIN: probable arabinose 5-phosphate
           isomerase-like [Brachypodium distachyon]
          Length = 404

 Score =  162 bits (411), Expect = 2e-37
 Identities = 78/126 (61%), Positives = 95/126 (75%), Gaps = 1/126 (0%)
 Frame = -1

Query: 563 QVKDIMKTPEELTLCREEDLILDQLVRLTGKGCWCMIIVDDKNQLLGTFADGDLRRILKS 384
           +VKD+MK   EL LC+E D+I+DQL  LT KGC C+++VDD+  L+GTF DGDLRR LK+
Sbjct: 278 KVKDVMKKQNELPLCKESDMIMDQLTELTSKGCGCLLVVDDEYHLIGTFTDGDLRRTLKA 337

Query: 383 SAKGFFNLTLGQACIRNPRTVRPDAMAVEAREVMNF-PTPVQFLPVADDNNFVLGIVELH 207
           S    FNLT+G+ C RNPRT+  DAMAVEA E M   P+PVQFLPV D+ N V GI+ LH
Sbjct: 338 SGPAIFNLTVGEMCNRNPRTITADAMAVEAMEKMESPPSPVQFLPVVDEKNIVSGIITLH 397

Query: 206 GLVSAG 189
           GLVSAG
Sbjct: 398 GLVSAG 403


>ref|XP_002302040.1| predicted protein [Populus trichocarpa] gi|118483855|gb|ABK93818.1|
           unknown [Populus trichocarpa]
           gi|222843766|gb|EEE81313.1| predicted protein [Populus
           trichocarpa]
          Length = 341

 Score =  162 bits (409), Expect = 3e-37
 Identities = 76/126 (60%), Positives = 99/126 (78%), Gaps = 1/126 (0%)
 Frame = -1

Query: 563 QVKDIMKTPEELTLCREEDLILDQLVRLTGKGCWCMIIVDDKNQLLGTFADGDLRRILKS 384
           +VKD+MK   EL +C+E DLI+DQLV LT KGC C++++D+++ L+GTF DGDLRR LK+
Sbjct: 215 KVKDVMKKQNELPICKEGDLIMDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKA 274

Query: 383 SAKGFFNLTLGQACIRNPRTVRPDAMAVEAREVMNF-PTPVQFLPVADDNNFVLGIVELH 207
           S +  F LT+G+ C RNPRT+ PDAMAVEA + M   P+PVQFLPV  D+N ++GIV LH
Sbjct: 275 SGEAIFKLTVGEMCNRNPRTIGPDAMAVEAMKKMESPPSPVQFLPVIKDDNILIGIVTLH 334

Query: 206 GLVSAG 189
           GLVSAG
Sbjct: 335 GLVSAG 340


>ref|NP_001170584.1| hypothetical protein [Zea mays] gi|238006162|gb|ACR34116.1| unknown
           [Zea mays] gi|413926545|gb|AFW66477.1| hypothetical
           protein ZEAMMB73_827303 [Zea mays]
          Length = 378

 Score =  161 bits (408), Expect = 4e-37
 Identities = 77/126 (61%), Positives = 97/126 (76%), Gaps = 1/126 (0%)
 Frame = -1

Query: 563 QVKDIMKTPEELTLCREEDLILDQLVRLTGKGCWCMIIVDDKNQLLGTFADGDLRRILKS 384
           +VKD+MK   EL LC+E D+I+DQL  LT KGC C+++VD+++ L+GTF DGDLRR LK+
Sbjct: 252 KVKDVMKKQNELPLCKEGDMIMDQLTELTSKGCGCLLVVDEEHHLIGTFTDGDLRRTLKA 311

Query: 383 SAKGFFNLTLGQACIRNPRTVRPDAMAVEAREVMNF-PTPVQFLPVADDNNFVLGIVELH 207
           S    F+LT+G+ C RNPRT+  DAMAVEA E M   P+PVQFLPV +DNN V GI+ LH
Sbjct: 312 SGPAIFSLTVGEMCNRNPRTITADAMAVEAMEKMESPPSPVQFLPVVNDNNVVCGIITLH 371

Query: 206 GLVSAG 189
           GLVSAG
Sbjct: 372 GLVSAG 377


>ref|NP_001045955.1| Os02g0158300 [Oryza sativa Japonica Group]
           gi|50251251|dbj|BAD28031.1| putative polysialic acid
           capsule expression protein [Oryza sativa Japonica Group]
           gi|50252181|dbj|BAD28176.1| putative polysialic acid
           capsule expression protein [Oryza sativa Japonica Group]
           gi|113535486|dbj|BAF07869.1| Os02g0158300 [Oryza sativa
           Japonica Group] gi|125538157|gb|EAY84552.1| hypothetical
           protein OsI_05923 [Oryza sativa Indica Group]
          Length = 344

 Score =  161 bits (407), Expect = 5e-37
 Identities = 77/126 (61%), Positives = 96/126 (76%), Gaps = 1/126 (0%)
 Frame = -1

Query: 563 QVKDIMKTPEELTLCREEDLILDQLVRLTGKGCWCMIIVDDKNQLLGTFADGDLRRILKS 384
           +VKD+MK   EL LC+E D+I+DQL  LT KGC C+++VDD+  L+GTF DGDLRR LK+
Sbjct: 218 KVKDVMKKQNELPLCKEGDMIMDQLTELTSKGCGCLLVVDDEYHLIGTFTDGDLRRTLKA 277

Query: 383 SAKGFFNLTLGQACIRNPRTVRPDAMAVEAREVMNF-PTPVQFLPVADDNNFVLGIVELH 207
           S +  FNLT+G+ C R+PRT+  DAMAV+A E M   P+PVQFLPV D NN V GI+ LH
Sbjct: 278 SGQAIFNLTVGEMCNRHPRTITADAMAVQAMEKMESPPSPVQFLPVVDSNNVVCGIITLH 337

Query: 206 GLVSAG 189
           GLVSAG
Sbjct: 338 GLVSAG 343


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