BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011872
         (1697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25128.3| unnamed protein product [Vitis vinifera]              355   2e-95
ref|XP_002276156.1| PREDICTED: F-box protein SKIP22 [Vitis vinif...   352   2e-94
ref|XP_002327736.1| predicted protein [Populus trichocarpa] gi|2...   351   3e-94
ref|XP_002522106.1| conserved hypothetical protein [Ricinus comm...   323   1e-85
gb|ADN33816.1| F-box family protein [Cucumis melo subsp. melo]        297   7e-78

>emb|CBI25128.3| unnamed protein product [Vitis vinifera]
          Length = 508

 Score =  355 bits (912), Expect = 2e-95
 Identities = 230/496 (46%), Positives = 305/496 (61%), Gaps = 35/496 (7%)
 Frame = +3

Query: 30   MKLRIRSLESKETLKIETPNPSSLQN----LKDAIAQKISASSEALHLSLNRKDAI-IAS 194
            MKLR+RSLESKETLKI+ P+P SLQ+    L  AI+   S+SS  ++LSLNRKD + ++S
Sbjct: 1    MKLRVRSLESKETLKIQVPDPCSLQHFIHLLSLAISSSSSSSSSIIYLSLNRKDELQVSS 60

Query: 195  LMDSLSSLGIASGDLIYYTQNPNGFSAAA-PIQAQVENHPIQANIPEQTLETEEISDNP- 368
             +D+L SLG+ SGDLI+Y+ NP  FS    P +  V N   +  + E          NP 
Sbjct: 61   SLDTLQSLGVTSGDLIFYSFNPTAFSQTPIPSETLVSNSERKETLLESQTLAPLAQANPH 120

Query: 369  ----ITSNVSTQALDQENE-----TLDSEEGV----DGNSNFLVRNLSSVPSFLQKVYKE 509
                  S VS    ++  E     ++D E GV    + +   +V+   S P FL+KV +E
Sbjct: 121  EPKEYGSLVSDSKKNETQEFSGATSMDVEGGVAAADEDDEPIVVKKSFSEPCFLRKVLRE 180

Query: 510  EMGYGNTEGNHKLLIIAVHAVFLESGFVCFDAVTKKKIEGFHLPEGWASKS-SVSVQYTV 686
            E+G    E  HKLL+IAVHAV LESGFV FD+V+  +++ FHL E +   + S+S+ YT+
Sbjct: 181  EVGDDGNE--HKLLVIAVHAVMLESGFVGFDSVSGMRVDRFHLSEEYPFAAISMSLWYTL 238

Query: 687  PDLLDSG--DEVVLETVDLKFQTLGKFVCVHGSLS-RQNPVGLFRLDGDRFVPSINFVCM 857
            P+LLD G  D   +++V LKFQ LG+F+ ++GSLS  ++ V    LD  RF P+++ +  
Sbjct: 239  PELLDHGCDDSPAIQSVALKFQHLGQFINIYGSLSGNRSTVHWVSLDEYRFAPTLDLMWT 298

Query: 858  LNCDLNNGKKEVDGSSKSYHEKEVFELWKIAKDGLALPLLIDICDKTGLEPPPCFMRLPT 1037
             +   ++ +++  GSS SY E EVFE WKI KDGLALPLL D+C+K GL PPPC MRLPT
Sbjct: 299  HS---DSAEEKDRGSSNSYPENEVFEFWKIVKDGLALPLLTDLCEKGGLLPPPCLMRLPT 355

Query: 1038 ELKMKILELLPGIDIGKVGCVSSELRYLSSNNELWKQKYMEEFSVSDSGEVPNDHWKDKY 1217
            ELK+KILELLPG+D+GKVGCV SEL YLSSNN+LWKQK+ EEF     G+     WKDK+
Sbjct: 356  ELKLKILELLPGVDLGKVGCVCSELMYLSSNNDLWKQKFTEEFGNVRVGQ-GFSLWKDKF 414

Query: 1218 AISXXXXXXXXXPSFMP--YPAL--PQHPPMRRQPWPFFGFPGVIGGDQDRFPA-----P 1370
            A            S M   +P+L  P + P+RR P P F  P  IGGD D FPA     P
Sbjct: 415  ATWWENRKKRKRVSGMCTWFPSLEAPSYFPIRRDPNP-FAIPPTIGGDYDHFPALGIPSP 473

Query: 1371 FG--NNQILRFPARRN 1412
            FG    +  RF A RN
Sbjct: 474  FGQPGRRYHRFLAPRN 489


>ref|XP_002276156.1| PREDICTED: F-box protein SKIP22 [Vitis vinifera]
            gi|147804806|emb|CAN73524.1| hypothetical protein
            VITISV_010705 [Vitis vinifera]
          Length = 563

 Score =  352 bits (902), Expect = 2e-94
 Identities = 242/568 (42%), Positives = 319/568 (56%), Gaps = 97/568 (17%)
 Frame = +3

Query: 30   MKLRIRSLESKETLKIETPNPSSLQN----LKDAIAQKISASSEALHLSLNRKDAI-IAS 194
            MKLR+RSLESKETLKI+ P+P SLQ+    L  AI+   S+SS  ++LSLNRKD + ++S
Sbjct: 1    MKLRVRSLESKETLKIQVPDPCSLQHFIHLLSLAISSSSSSSSSIIYLSLNRKDELQVSS 60

Query: 195  LMDSLSSLGIASGDLIYYTQNPNGFSA---AAPIQAQVENH----PIQANIPEQT----- 338
             +D+L SLG+ SGDLI+Y+ NP  FS    A PI   + N     P Q  +P Q      
Sbjct: 61   SLDTLQSLGVTSGDLIFYSFNPTAFSRQTHAPPIPETLVNEGTPIPSQTLVPSQALGPNS 120

Query: 339  --------------------------LETEEISDNPITSN-------VSTQAL------- 398
                                      +E   I    + SN       + +Q L       
Sbjct: 121  GETLIQSQTLDPNSGEAQTLPMTKRVMEETPIPSETLVSNSERKETLLESQTLAPLAQAN 180

Query: 399  -------------DQENET--------LDSEEGV----DGNSNFLVRNLSSVPSFLQKVY 503
                          ++NET        +D E GV    + +   +V+   S P FL+KV 
Sbjct: 181  PHEPKEYGSLVSDSKKNETQEFSGATSMDVEGGVAAADEDDEPIVVKKSFSEPCFLRKVL 240

Query: 504  KEEMGYGNTEGNHKLLIIAVHAVFLESGFVCFDAVTKKKIEGFHLPEGWASKS-SVSVQY 680
            +EE+G    E  HKLL+IAVHAV LESGFV FD+V+  +++ FHL E +   + S+S+ Y
Sbjct: 241  REEVGDDGNE--HKLLVIAVHAVMLESGFVGFDSVSGMRVDRFHLSEEYPFAAISMSLWY 298

Query: 681  TVPDLLDSG--DEVVLETVDLKFQTLGKFVCVHGSLS-RQNPVGLFRLDGDRFVPSINFV 851
            T+P+LLD G  D   +++V LKFQ LG+F+ ++GSLS  ++ V    LD  RF P+++ +
Sbjct: 299  TLPELLDHGCDDSPAIQSVALKFQHLGQFINIYGSLSGNRSTVHWVSLDEYRFAPTLDLM 358

Query: 852  CMLNCDLNNGKKEVDGSSKSYHEKEVFELWKIAKDGLALPLLIDICDKTGLEPPPCFMRL 1031
               +   ++ +++  GSS SY E EVFE WKI KDGLALPLL D+C+K GL PPPC MRL
Sbjct: 359  WTHS---DSAEEKDRGSSNSYPENEVFEFWKIVKDGLALPLLTDLCEKGGLLPPPCLMRL 415

Query: 1032 PTELKMKILELLPGIDIGKVGCVSSELRYLSSNNELWKQKYMEEFSVSDSGEVPNDHWKD 1211
            PTELK+KILELLPG+D+GKVGCV SEL YLSSNN+LWKQK+ EEF     G+     WKD
Sbjct: 416  PTELKLKILELLPGVDLGKVGCVCSELMYLSSNNDLWKQKFTEEFGNVRVGQ-GFSLWKD 474

Query: 1212 KYAISXXXXXXXXXPSFMP--YPAL--PQHPPMRRQPWPFFGFPGVIGGDQDRFPA---- 1367
            K+A            S M   +P+L  P + P+RR P P F  P  IGGD D FPA    
Sbjct: 475  KFATWWENRKKRKRVSGMCTWFPSLEAPSYFPIRRDPNP-FAIPPTIGGDYDHFPALGIP 533

Query: 1368 -PFG--NNQILRFPARRNFTLHCNLDGF 1442
             PFG    +  RF A RN    CNL GF
Sbjct: 534  SPFGQPGRRYHRFLAPRNTIPRCNLGGF 561


>ref|XP_002327736.1| predicted protein [Populus trichocarpa] gi|222836821|gb|EEE75214.1|
            predicted protein [Populus trichocarpa]
          Length = 545

 Score =  351 bits (901), Expect = 3e-94
 Identities = 232/554 (41%), Positives = 323/554 (58%), Gaps = 81/554 (14%)
 Frame = +3

Query: 30   MKLRIRSLESKETLKIETPNPSSLQNLKDAIAQKISASSEALHLSLNRKDAIIASLM-DS 206
            MKLR+RS++SKET+KI+ P+  +LQ LK+ +++ IS+S  +L+LSLNRKD +  SL  DS
Sbjct: 1    MKLRLRSVQSKETVKIQVPDSCTLQQLKETLSRAISSSGSSLYLSLNRKDELNTSLPEDS 60

Query: 207  LSSLGIASGDLIYYTQNPNGFSAA---------APIQAQVENHP--IQANIPEQTLETEE 353
            L SLGI SGDLIY++ NP  FS++         + IQ QV+ H   +Q  +P+Q++  +E
Sbjct: 61   LQSLGITSGDLIYFSVNPKDFSSSGQPLCLGSSSSIQEQVQGHRGNVQEPMPDQSMSFQE 120

Query: 354  IS----------DNPITSNVSTQALD---------------------------------- 401
                        D  +  +V  QA D                                  
Sbjct: 121  SKCSDLNMLENQDLFVQGHVGVQANDTNSRETISEISPQMHLLGQKHGIAESDMNGAVTE 180

Query: 402  ---------QENETLDSEE-------GVDGNSNFLVRNLSSVPSFLQKVYKEEMGYGNTE 533
                     +  ETL+++E        VD  S  +     S P FL+++ ++E+G  +  
Sbjct: 181  GHGALGSKTRSRETLETQELTSVEAMDVDPGSVDVGNKRFSEPYFLRRLLRKELG--DDG 238

Query: 534  GNHKLLIIAVHAVFLESGFVCFDAVTKKKIEGFHLPEGWASKS-SVSVQYTVPDLLDSGD 710
             N+KLL+IAVHAVF+ESGFV F++++  +++GFHLPE  +S++ +VS+ YT+P+LLDS  
Sbjct: 239  SNYKLLVIAVHAVFIESGFVGFNSISGMRVDGFHLPEEQSSRNLAVSLCYTLPELLDS-- 296

Query: 711  EVVLETVDLKFQTLGKFVCVHGSLSRQNPVGLF--RLDGDRFVPSINFVCMLNCDLNNGK 884
            +V+ ET+ LK Q+LG FV V+GSLS+    GL+  RLD ++FVP+I+FV     D N+G 
Sbjct: 297  KVIAETIVLKLQSLGHFVNVYGSLSKGGS-GLYHARLDINKFVPAIDFVW--ENDKNDGM 353

Query: 885  KEVDGSSKSYHEKEVFELWKIAKDGLALPLLIDICDKTGLEPPPCFMRLPTELKMKILEL 1064
               D SS  Y E E+FE WKI KDGLALPLLIDIC+K GL  P C MRLPTELK+KI EL
Sbjct: 354  NGSDRSSILYPENEIFEFWKIVKDGLALPLLIDICEKAGLVLPSCLMRLPTELKLKIFEL 413

Query: 1065 LPGIDIGKVGCVSSELRYLSSNNELWKQKYMEEFSVSDSGEVPNDHWKDKYA-ISXXXXX 1241
            LP IDI K+ CV SE+RYLSSNN+LWKQK++EEF    +      +WK ++A        
Sbjct: 414  LPAIDIAKMECVCSEMRYLSSNNDLWKQKFVEEFGDGTAAH-GTLNWKARFASYWENKKR 472

Query: 1242 XXXXPSFMPY-PALPQHPPMRRQPWPFFGFPGVIGGDQDRFPA----PFGNNQILRFPAR 1406
                 ++  Y   LP H P+RR P P +  P +IGGD DR P     P+    I     R
Sbjct: 473  KRDFNAWQEYRQFLPFHVPIRRDPNPLW-CPSIIGGDYDRLPGLGIPPYRRPGIGWPQPR 531

Query: 1407 RNFTLHCNLDGFDA 1448
             NF+ +CNL GF +
Sbjct: 532  HNFSPNCNLGGFSS 545


>ref|XP_002522106.1| conserved hypothetical protein [Ricinus communis]
            gi|223538705|gb|EEF40306.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 523

 Score =  323 bits (827), Expect = 1e-85
 Identities = 226/534 (42%), Positives = 307/534 (57%), Gaps = 57/534 (10%)
 Frame = +3

Query: 30   MKLRIRSLESKETLKIETPNPSSLQNLKDAIAQKISASSEA---LHLSLNRKDAIIAS-L 197
            MKLR+RS+ESKET+K+E PN  +LQ LK+ +   +S+SS +   LH SLNRKD +++S L
Sbjct: 1    MKLRLRSVESKETVKLEVPNDCNLQQLKETLILALSSSSSSSSSLHFSLNRKDELLSSSL 60

Query: 198  MDSLSSLGIASGDLIYYTQNPNG-FSAAAPIQAQV--------ENHPIQANIPEQTLETE 350
             DSL SLGI SGDLIY+TQ P+G FS +   Q +         + +  Q NI E + +  
Sbjct: 61   QDSLQSLGITSGDLIYFTQKPDGLFSPSQQTQQRTFQESESFAQENAAQLNIKEPSSKEI 120

Query: 351  EISDN--PITSNVSTQALD-------------------QENETLDSEEGVDGNSNFLVRN 467
            EIS+    I  N S Q                      Q  ETL++++G     +  V  
Sbjct: 121  EISEELEVIGLNCSNQETSFQDSSIKETRQGLPAVSNTQFGETLENDQGYARGDDMDVGT 180

Query: 468  LS----------SVPSFLQKVYKEEMGYGNTEGNHKLLIIAVHAVFLESGFVCFDAVTKK 617
             S          S P FL++V  EE  +     ++KLL IA+HAVFLESGFV FD+V+  
Sbjct: 181  ESADVDVKSKRISEPCFLKRVLGEE-DFAVDFSDNKLLFIAIHAVFLESGFVGFDSVSGL 239

Query: 618  KIEGFHL-PEGWASKSSVSVQYTVPDLLDSGDEVVLETVDLKFQTLGKFVCVHGSLSRQN 794
            +++ FHL  E      + SV YT+P+LLD+ +  V+++V LKFQTLG+FV V+GS+++  
Sbjct: 240  RVDLFHLLQEQPLMNFTTSVSYTLPELLDNDN--VIDSVVLKFQTLGQFVNVYGSVAKSR 297

Query: 795  PVGLFR--LDGDRFVPSINFVCMLNCDLNNGKKEVDGSSKSYHEKEVFELWKIAKDGLAL 968
             + ++R  LD  R+VP+I  +      +   K +    + SY E  VFELWKI KD LAL
Sbjct: 298  SL-VYRSCLDKCRYVPAIGSIW-----ITWDKSDTAYENNSYTENVVFELWKIVKDHLAL 351

Query: 969  PLLIDICDKTGLEPPPCFMRLPTELKMKILELLPGIDIGKVGCVSSELRYLSSNNELWKQ 1148
            PLLID+C+KTGL  PPC MRLP ++K KILE LPGI I ++ CV  E++YLSS+N+LWKQ
Sbjct: 352  PLLIDLCEKTGLVLPPCLMRLPADIKHKILESLPGIAIARMACVCKEMQYLSSSNDLWKQ 411

Query: 1149 KYMEEFSVSDSGEVPND--HWKDKYAISXXXXXXXXXPSFM-PYPA-LPQHPPMRRQPWP 1316
            KY EEF    SG +  +  +WK K+A S          SF+ P P    +  P R    P
Sbjct: 412  KYGEEFG---SGTLQQEMVNWKVKFASSWENRKKRRKRSFVRPTPVNFIRSEPYRFMVPP 468

Query: 1317 FFGFPGVIGGDQDRFPA-----PFGN-NQILRFPARRNFTLHCNLDGFDA*ATH 1460
              G   +IGGD DR P      PFG   + LR   RRN + +CNL GF+A A H
Sbjct: 469  QIGSRIIIGGDYDRLPGLGVPPPFGQPGRNLRNIVRRNISPNCNLGGFNAQAKH 522


>gb|ADN33816.1| F-box family protein [Cucumis melo subsp. melo]
          Length = 502

 Score =  297 bits (760), Expect = 7e-78
 Identities = 210/515 (40%), Positives = 292/515 (56%), Gaps = 45/515 (8%)
 Frame = +3

Query: 30   MKLRIRSLESKETLKIETPNPSSLQNLKDAIAQKISAS--SEALHLSLNRKDAIIASLM- 200
            MKLR+RSLESK+TL+IE P+PS+L +LK  + Q +S+S  +++LHLSLNRKD + AS   
Sbjct: 1    MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60

Query: 201  DSLSSLGIASGDLIYYTQNPNGFSA----AAPIQA-------------------QVENHP 311
            DSL SLGI SGDL+++T  P+ FS+    A PIQ+                   QV+   
Sbjct: 61   DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120

Query: 312  ---IQANIPEQTLETEE---ISDNPITSNVSTQALDQENETLDSEEGVDGNSNFLVRNLS 473
               I  ++ +  LE  E   +  +   + ++T ++ +E++  + E  V+     +V    
Sbjct: 121  LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEME--VEEEPTVVVEKKC 178

Query: 474  SVPSFLQKVYKEEMGYGNTEGNHKLLIIAVHAVFLESGFVCFDAVTKKKIEGFHLPEGWA 653
            S P FL++V KEE+GY      HKLL+ AVHAV LESGFV  +     +   F +PE W 
Sbjct: 179  SRPIFLRRVLKEELGYDRNA--HKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPEDWP 236

Query: 654  SKS-SVSVQYTVPDLLDSG--DEVVLETVDLKFQTLGKFVCVHGSL--SRQNPVGLFRLD 818
            S S ++S+ YT+P+LL     +  + E V LKFQ+LG FV V+GSL  SR + V    LD
Sbjct: 237  SPSFTMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVSLD 296

Query: 819  GDRFVPSINFVCMLNCDLNNGKKEVDGSSKSYHEKEVFELWKIAKDGLALPLLIDICDKT 998
              +F P+++ + + +   N    E +G+     EK+VFE WKI KD LALPLLIDIC+KT
Sbjct: 297  ERKFAPNLDLIWVDSVS-NYIMDEKEGNP----EKQVFEFWKIVKDALALPLLIDICEKT 351

Query: 999  GLEPPPCFMRLPTELKMKILELLPGIDIGKVGCVSSELRYLSSNNELWKQKYMEEFSVSD 1178
            GL PP  FM LP ++K+KILE LPG+DI +V CV +ELRYL+S+NELWK K+ +EF + D
Sbjct: 352  GLPPPASFMLLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLED 411

Query: 1179 SGEVPNDHWKDKYA--ISXXXXXXXXXPSFMPYPALPQHPPMRRQPWPFFGFPGVIGGDQ 1352
             G   N  WK K+               +     +  +H   RR P+P F  P +IGGD 
Sbjct: 412  -GVSGNRVWKTKFVEYYEREKQRNRRTSNMRDAISFGRH---RRPPYP-FPVPHIIGGDY 466

Query: 1353 D-----RFPAPFGNNQIL-RFPARRNFTLHCNLDG 1439
            D     R P      Q L R P R     H +L G
Sbjct: 467  DIVSGIRLPVYGVPGQSLPRIPRRHAVIPHYDLRG 501