BLASTX nr result

ID: Cimicifuga21_contig00011848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011848
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276513.1| PREDICTED: trafficking protein particle comp...   290   1e-76
ref|XP_002276578.1| PREDICTED: trafficking protein particle comp...   289   2e-76
ref|XP_004145907.1| PREDICTED: trafficking protein particle comp...   288   3e-76
gb|ACJ84157.1| unknown [Medicago truncatula] gi|388493118|gb|AFK...   288   3e-76
ref|XP_002327510.1| predicted protein [Populus trichocarpa] gi|2...   288   4e-76

>ref|XP_002276513.1| PREDICTED: trafficking protein particle complex subunit 1 isoform 1
           [Vitis vinifera] gi|359490457|ref|XP_003634094.1|
           PREDICTED: trafficking protein particle complex subunit
           1 isoform 2 [Vitis vinifera]
           gi|147834231|emb|CAN66358.1| hypothetical protein
           VITISV_016122 [Vitis vinifera]
           gi|302143758|emb|CBI22619.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score =  290 bits (741), Expect = 1e-76
 Identities = 137/153 (89%), Positives = 143/153 (93%)
 Frame = -1

Query: 460 MQFFGGSDINPSPPVPTGSGNNGHMMYVFNRNGVCLLYREWNRPLRTLNSQQDHKLMFGL 281
           MQFFGGS+I+P PP+PT SGNN HMMYVFNRNGVCLLYREWNRPLRTLN+QQDHKLMFGL
Sbjct: 1   MQFFGGSEISPLPPLPTASGNNAHMMYVFNRNGVCLLYREWNRPLRTLNAQQDHKLMFGL 60

Query: 280 LFSLKSFTAKMDPVSVEKGNLGVPQLTGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 101
           LFSLKS TAKMDP SVEKGNLGVPQL GQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP
Sbjct: 61  LFSLKSLTAKMDPTSVEKGNLGVPQLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 120

Query: 100 KTGDLREPLKHIYNLYVEYVVKNPLYSPGTQIK 2
            TGDLRE LK+IYNLYVEYVVKNPLYSPGT  +
Sbjct: 121 GTGDLRESLKYIYNLYVEYVVKNPLYSPGTPFR 153


>ref|XP_002276578.1| PREDICTED: trafficking protein particle complex subunit 1 isoform 1
           [Vitis vinifera] gi|359490712|ref|XP_003634147.1|
           PREDICTED: trafficking protein particle complex subunit
           1 isoform 2 [Vitis vinifera]
           gi|302143925|emb|CBI23030.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score =  289 bits (739), Expect = 2e-76
 Identities = 137/153 (89%), Positives = 143/153 (93%)
 Frame = -1

Query: 460 MQFFGGSDINPSPPVPTGSGNNGHMMYVFNRNGVCLLYREWNRPLRTLNSQQDHKLMFGL 281
           MQFFGGSDI+P PP PT SGNN HMMYVFN+NGVCLLYREWNR LRTLN+QQDHKLMFGL
Sbjct: 1   MQFFGGSDISPLPPPPTASGNNAHMMYVFNKNGVCLLYREWNRSLRTLNAQQDHKLMFGL 60

Query: 280 LFSLKSFTAKMDPVSVEKGNLGVPQLTGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 101
           LFSLKS TAKMDP SVEKGNLGVPQLTGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP
Sbjct: 61  LFSLKSLTAKMDPTSVEKGNLGVPQLTGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 120

Query: 100 KTGDLREPLKHIYNLYVEYVVKNPLYSPGTQIK 2
           +TGDLRE LK+IYNLYVEYVVKNPLYSPG  I+
Sbjct: 121 RTGDLRESLKYIYNLYVEYVVKNPLYSPGMPIR 153


>ref|XP_004145907.1| PREDICTED: trafficking protein particle complex subunit 1-like
           [Cucumis sativus]
          Length = 169

 Score =  288 bits (738), Expect = 3e-76
 Identities = 133/153 (86%), Positives = 144/153 (94%)
 Frame = -1

Query: 460 MQFFGGSDINPSPPVPTGSGNNGHMMYVFNRNGVCLLYREWNRPLRTLNSQQDHKLMFGL 281
           MQFFGGS+I+PSPPVPT +GNN HMMY+FNRNGVCL YREWNRPLRTLN QQDHKLMFGL
Sbjct: 1   MQFFGGSEISPSPPVPTATGNNVHMMYIFNRNGVCLFYREWNRPLRTLNPQQDHKLMFGL 60

Query: 280 LFSLKSFTAKMDPVSVEKGNLGVPQLTGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 101
           LFSLKSFTAKMDP S +KGNLGVPQL GQGCSFHSFRTNTYKLSF E+PSGIKIILVTHP
Sbjct: 61  LFSLKSFTAKMDPTSADKGNLGVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHP 120

Query: 100 KTGDLREPLKHIYNLYVEYVVKNPLYSPGTQIK 2
           +TGDLR+PLK+IYNLYVEYVVKNP+YSPGT I+
Sbjct: 121 RTGDLRDPLKYIYNLYVEYVVKNPIYSPGTPIR 153


>gb|ACJ84157.1| unknown [Medicago truncatula] gi|388493118|gb|AFK34625.1| unknown
           [Medicago truncatula] gi|388514053|gb|AFK45088.1|
           unknown [Medicago truncatula]
          Length = 169

 Score =  288 bits (737), Expect = 3e-76
 Identities = 133/153 (86%), Positives = 144/153 (94%)
 Frame = -1

Query: 460 MQFFGGSDINPSPPVPTGSGNNGHMMYVFNRNGVCLLYREWNRPLRTLNSQQDHKLMFGL 281
           MQFFGGS+I+PSPP PT SGNNGHM+YVFNRNG+CLLYREWNRPL TLN+QQDHKLMFGL
Sbjct: 1   MQFFGGSEISPSPPAPTASGNNGHMLYVFNRNGICLLYREWNRPLHTLNAQQDHKLMFGL 60

Query: 280 LFSLKSFTAKMDPVSVEKGNLGVPQLTGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 101
           LFSLKS TAKMDP S EKGNLGVPQL GQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP
Sbjct: 61  LFSLKSLTAKMDPTSAEKGNLGVPQLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 120

Query: 100 KTGDLREPLKHIYNLYVEYVVKNPLYSPGTQIK 2
           +TGDLR+ LK+IYNLYVEYVVKNPLY+PG+ I+
Sbjct: 121 RTGDLRDSLKYIYNLYVEYVVKNPLYTPGSPIR 153


>ref|XP_002327510.1| predicted protein [Populus trichocarpa] gi|222836064|gb|EEE74485.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  288 bits (736), Expect = 4e-76
 Identities = 133/153 (86%), Positives = 143/153 (93%)
 Frame = -1

Query: 460 MQFFGGSDINPSPPVPTGSGNNGHMMYVFNRNGVCLLYREWNRPLRTLNSQQDHKLMFGL 281
           MQFFGGSDI+PSPP PT SGNN HMMYVFNRNGVCLLYREWNRPL TLN+QQDHKLMFGL
Sbjct: 1   MQFFGGSDISPSPPAPTASGNNAHMMYVFNRNGVCLLYREWNRPLHTLNAQQDHKLMFGL 60

Query: 280 LFSLKSFTAKMDPVSVEKGNLGVPQLTGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 101
           LFSLKS TAKMDP S++KGNLGVPQL GQGCSFHSFRTNTYKLSFME+PSGIKIIL+THP
Sbjct: 61  LFSLKSLTAKMDPTSMDKGNLGVPQLPGQGCSFHSFRTNTYKLSFMETPSGIKIILITHP 120

Query: 100 KTGDLREPLKHIYNLYVEYVVKNPLYSPGTQIK 2
           KTGDLRE LK+IYNLYVEYVVKNP+Y+PG  I+
Sbjct: 121 KTGDLRESLKYIYNLYVEYVVKNPIYTPGAPIR 153


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