BLASTX nr result

ID: Cimicifuga21_contig00011834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011834
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284547.1| PREDICTED: carnitinyl-CoA dehydratase-like [...   172   6e-41
ref|XP_002284541.1| PREDICTED: carnitinyl-CoA dehydratase-like [...   171   1e-40
emb|CAN82902.1| hypothetical protein VITISV_036844 [Vitis vinifera]   166   4e-39
ref|XP_002868282.1| enoyl-CoA hydratase/isomerase family protein...   151   8e-35
ref|NP_193179.1| indole-3-butyric acid response 10 [Arabidopsis ...   149   4e-34

>ref|XP_002284547.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera]
          Length = 238

 Score =  172 bits (435), Expect = 6e-41
 Identities = 82/127 (64%), Positives = 98/127 (77%)
 Frame = +3

Query: 240 MCTLETRGNIFFLTLTGPTEHRLSPTLISEIRALLAQIRSESKPGSVLITTAEGKFFSNG 419
           MCTLE RGN+FFLTLTG  EHRL P+L   IR+ LAQ++S++ PGS LITTA+GKFFSNG
Sbjct: 1   MCTLEQRGNLFFLTLTGDNEHRLGPSLFDSIRSALAQVKSQATPGSALITTAQGKFFSNG 60

Query: 420 FDLAWAQSTGPSNFRDRLHQMVCDFKPLIADLLSLPLPTIXXXXXXXXXXGFMLAIGHDY 599
            DLAWAQ+ G S+FRDRL  ++  FKP++ADLLSLP+PTI          GFMLAI HDY
Sbjct: 61  LDLAWAQAAGSSSFRDRLSHLLDCFKPIVADLLSLPMPTIAAVSGHAAAAGFMLAISHDY 120

Query: 600 VLMRKDR 620
           VLM+ DR
Sbjct: 121 VLMKNDR 127


>ref|XP_002284541.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera]
          Length = 238

 Score =  171 bits (432), Expect = 1e-40
 Identities = 82/127 (64%), Positives = 96/127 (75%)
 Frame = +3

Query: 240 MCTLETRGNIFFLTLTGPTEHRLSPTLISEIRALLAQIRSESKPGSVLITTAEGKFFSNG 419
           MCTLE RGN+F L LTG  EHRL PTL+  IR+ LAQ++S++ PGS LITTA GKFFSNG
Sbjct: 1   MCTLEQRGNLFLLILTGDNEHRLGPTLVDSIRSALAQVKSQATPGSALITTAHGKFFSNG 60

Query: 420 FDLAWAQSTGPSNFRDRLHQMVCDFKPLIADLLSLPLPTIXXXXXXXXXXGFMLAIGHDY 599
            DL WAQ+ G S FRDRL+ +V +FKP+IADLLSLP+PTI          GFMLAI HDY
Sbjct: 61  LDLPWAQAAGSSGFRDRLNHLVNNFKPIIADLLSLPMPTIAAVSGHAAAAGFMLAISHDY 120

Query: 600 VLMRKDR 620
           VLM+ DR
Sbjct: 121 VLMKNDR 127


>emb|CAN82902.1| hypothetical protein VITISV_036844 [Vitis vinifera]
          Length = 238

 Score =  166 bits (419), Expect = 4e-39
 Identities = 80/127 (62%), Positives = 94/127 (74%)
 Frame = +3

Query: 240 MCTLETRGNIFFLTLTGPTEHRLSPTLISEIRALLAQIRSESKPGSVLITTAEGKFFSNG 419
           MCTLE RGN+F L LTG  EHRL PTL+  IR+ LAQ++S++ PGS LITTA  KFFSNG
Sbjct: 1   MCTLEERGNLFLLILTGDNEHRLGPTLVDSIRSALAQVKSQATPGSALITTAHDKFFSNG 60

Query: 420 FDLAWAQSTGPSNFRDRLHQMVCDFKPLIADLLSLPLPTIXXXXXXXXXXGFMLAIGHDY 599
            DL WAQ+ G S FRDRL+ +V +FKP+IADLLSLP+PTI          GF LAI HDY
Sbjct: 61  LDLPWAQAAGSSGFRDRLNHLVNNFKPIIADLLSLPMPTIAAVSGHAAAAGFRLAISHDY 120

Query: 600 VLMRKDR 620
           VLM+ DR
Sbjct: 121 VLMKNDR 127


>ref|XP_002868282.1| enoyl-CoA hydratase/isomerase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297314118|gb|EFH44541.1| enoyl-CoA
           hydratase/isomerase family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 240

 Score =  151 bits (382), Expect = 8e-35
 Identities = 78/129 (60%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
 Frame = +3

Query: 240 MCTLETRGNIFFLTLTGPTEHRLSPTLISEIRALLAQIRSESKPGSVLITTAEGKFFSNG 419
           MCTLE RG++F LTLTG  EHR  P  I+ I +LL Q +S+S  GS+LITTA GKFFSNG
Sbjct: 1   MCTLEKRGDLFLLTLTGDGEHRFHPDTIATILSLLEQAKSQSTRGSILITTANGKFFSNG 60

Query: 420 FDLAWAQSTG-PSNFRDRLHQMVCDFKPLIADLLSLPLPTIXXXXXXXXXXGFMLAIGHD 596
           FDLAWAQ+ G  +   +RLHQMV  FKP++A LL LP+PTI          G MLAI HD
Sbjct: 61  FDLAWAQTAGSKTGAANRLHQMVESFKPVVAALLDLPMPTIAALNGHAAAAGLMLAISHD 120

Query: 597 YVLMRKDRG 623
           YV MRKDRG
Sbjct: 121 YVFMRKDRG 129


>ref|NP_193179.1| indole-3-butyric acid response 10 [Arabidopsis thaliana]
           gi|14190481|gb|AAK55721.1|AF380640_1 AT4g14430/dl3255c
           [Arabidopsis thaliana] gi|2244799|emb|CAB10222.1|
           carnitine racemase like protein [Arabidopsis thaliana]
           gi|7268149|emb|CAB78485.1| carnitine racemase like
           protein [Arabidopsis thaliana]
           gi|15810107|gb|AAL06979.1| AT4g14430/dl3255c
           [Arabidopsis thaliana] gi|110738734|dbj|BAF01291.1|
           carnitine racemase like protein [Arabidopsis thaliana]
           gi|332658044|gb|AEE83444.1| indole-3-butyric acid
           response 10 [Arabidopsis thaliana]
          Length = 240

 Score =  149 bits (376), Expect = 4e-34
 Identities = 76/129 (58%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
 Frame = +3

Query: 240 MCTLETRGNIFFLTLTGPTEHRLSPTLISEIRALLAQIRSESKPGSVLITTAEGKFFSNG 419
           MCTLE RG++F LTLTG  EHR  P  I+ I +LL Q +S+S  GS+LITTA GKFFSNG
Sbjct: 1   MCTLEKRGDLFLLTLTGDGEHRFHPDTIATILSLLEQAKSQSTRGSILITTANGKFFSNG 60

Query: 420 FDLAWAQSTG-PSNFRDRLHQMVCDFKPLIADLLSLPLPTIXXXXXXXXXXGFMLAIGHD 596
           FDLAWAQ+ G  +   +RLHQMV  FKP++A LL LP+PTI          G +LA+ HD
Sbjct: 61  FDLAWAQTAGSKTGAANRLHQMVESFKPVVAALLDLPMPTIAALNGHAAAAGLILALSHD 120

Query: 597 YVLMRKDRG 623
           YV MRKDRG
Sbjct: 121 YVFMRKDRG 129


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