BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011806
         (1419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [...   404   e-110
ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [...   397   e-108
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...   395   e-107
emb|CBI31382.3| unnamed protein product [Vitis vinifera]              395   e-107
gb|ABQ23585.1| putative KH-domain containing protein [Medicago t...   389   e-105

>ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
          Length = 337

 Score =  404 bits (1039), Expect = e-110
 Identities = 219/335 (65%), Positives = 250/335 (74%), Gaps = 6/335 (1%)
 Frame = +3

Query: 144  MESTDSPYNSSGEEEAPPSDSIPIESLTLEENEKPTYIRLLVSNGAAGSVIGKGGSTINE 323
            MEST+S Y SS E     + S P +S +L+  EKPTYIR LVSN AAGSVIGKGGSTI +
Sbjct: 1    MESTESSYVSSPEGPRKHAASPPPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITD 60

Query: 324  FQSQSGARIQLSRNNEFFPGTSDRIVKVSGTFDEIMNAVELILGKLGDEVHDEDGNDYDP 503
            FQSQSGARIQLSRN+EFFPGT+DRI+ VSG  +EI  AVELIL KL  E+H ED ND +P
Sbjct: 61   FQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEP 120

Query: 504  RAKVRIIVPNSSCXXXXXXXXATIKSFIEDSHAGIKISPQDNNYSGLNDRLVTIAGSFDE 683
            + KVR++VPN SC        ATI+SFIEDS AGIKISPQDNNY G NDRLVT+ GSFDE
Sbjct: 121  KTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDE 180

Query: 684  QMRATFLVLSKLADDSHYMQYMNAPFSYAGFNFS---NSPYGYTNPSAGILPRNGTY--- 845
            QMRA  L++SKL++D HY Q MN+PFSY G  FS     PY Y  PS      N      
Sbjct: 181  QMRAIELIVSKLSEDPHYAQSMNSPFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRP 240

Query: 846  XXXXXXKFQNNKVYQEDRSNSFTFGVADEHIGLVVGRGGRNIMEISQASGARIKISDRGD 1025
                  K QN+K   E+RSNS T GVADEHIGLVVGRGGRNIMEISQASGARIKISDRGD
Sbjct: 241  NGAAGGKLQNSK---EERSNSLTMGVADEHIGLVVGRGGRNIMEISQASGARIKISDRGD 297

Query: 1026 FIAGTSDRKVTITGSQDAISTAEGMIMQKIAHATE 1130
            +++GT+DRKVTITGSQ AI TAE MI+QK+A+ATE
Sbjct: 298  YVSGTTDRKVTITGSQRAIRTAESMILQKVAYATE 332


>ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
          Length = 337

 Score =  397 bits (1021), Expect = e-108
 Identities = 216/335 (64%), Positives = 246/335 (73%), Gaps = 6/335 (1%)
 Frame = +3

Query: 144  MESTDSPYNSSGEEEAPPSDSIPIESLTLEENEKPTYIRLLVSNGAAGSVIGKGGSTINE 323
            MEST+S Y SS E     + S P +  +L+  EKPTYIR LVSN AAGSVIGKGGSTI +
Sbjct: 1    MESTESSYVSSPEGPRKHAASPPPKPPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITD 60

Query: 324  FQSQSGARIQLSRNNEFFPGTSDRIVKVSGTFDEIMNAVELILGKLGDEVHDEDGNDYDP 503
            FQSQSGARIQLSRN+EFFPGT+DRI+ VSG  +EI  AVELIL KL  E+H ED ND +P
Sbjct: 61   FQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEP 120

Query: 504  RAKVRIIVPNSSCXXXXXXXXATIKSFIEDSHAGIKISPQDNNYSGLNDRLVTIAGSFDE 683
            + KVR++VPN SC         TI+SFIEDS AGIKISPQDNNY G NDRLV + G+FDE
Sbjct: 121  KTKVRLVVPNGSCGGIIGKGGVTIRSFIEDSQAGIKISPQDNNYYGQNDRLVMLTGTFDE 180

Query: 684  QMRATFLVLSKLADDSHYMQYMNAPFSYAGFNFS---NSPYGYTNPSAGILPRNGTY--- 845
            QMRA  L++SKLA+D HY Q MN+PFSY G  FS     PY Y  PS      N      
Sbjct: 181  QMRAIELIVSKLAEDPHYAQSMNSPFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRP 240

Query: 846  XXXXXXKFQNNKVYQEDRSNSFTFGVADEHIGLVVGRGGRNIMEISQASGARIKISDRGD 1025
                  K QN+K   E+RSNS T GVADEHIGLVVGRGGRNIMEISQ SGARIKISDRGD
Sbjct: 241  NGTAGGKLQNSK---EERSNSLTMGVADEHIGLVVGRGGRNIMEISQVSGARIKISDRGD 297

Query: 1026 FIAGTSDRKVTITGSQDAISTAEGMIMQKIAHATE 1130
            +I+GT+DRKVTITGSQ AI TAE MI+QK+A+ATE
Sbjct: 298  YISGTTDRKVTITGSQRAIRTAESMILQKVAYATE 332


>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score =  395 bits (1016), Expect = e-107
 Identities = 219/329 (66%), Positives = 249/329 (75%)
 Frame = +3

Query: 144  MESTDSPYNSSGEEEAPPSDSIPIESLTLEENEKPTYIRLLVSNGAAGSVIGKGGSTINE 323
            MES +S Y SS   E PP  S P  S T +  EK TYIR LVSN AAGSVIGKGGSTIN+
Sbjct: 1    MESPESAYVSS--PEVPPKRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTIND 58

Query: 324  FQSQSGARIQLSRNNEFFPGTSDRIVKVSGTFDEIMNAVELILGKLGDEVHDEDGNDYDP 503
            FQSQSGARIQLSRN+EFFPGTSDRI+ +SG  +EI+ A+ELIL KL  E+H EDG++ DP
Sbjct: 59   FQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADP 118

Query: 504  RAKVRIIVPNSSCXXXXXXXXATIKSFIEDSHAGIKISPQDNNYSGLNDRLVTIAGSFDE 683
            R+KVR+IVPNSSC        +TIKSFIEDS A IKISPQDNNY GL DRLVT+ GS +E
Sbjct: 119  RSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEE 178

Query: 684  QMRATFLVLSKLADDSHYMQYMNAPFSYAGFNFSNSPYGYTNPSAGILPRNGTYXXXXXX 863
            QMRA  L+LSKL +D HY Q+MNAPFSYA   +++  YG  N + G              
Sbjct: 179  QMRAIDLILSKLTEDPHYTQFMNAPFSYAA-AYNSMNYG-PNGAGG-------------- 222

Query: 864  KFQNNKVYQEDRSNSFTFGVADEHIGLVVGRGGRNIMEISQASGARIKISDRGDFIAGTS 1043
            KFQNNK   EDRSNS T GVADEHIGLVVGRGGRNIM+ISQASGARIKISDRGDF++GT+
Sbjct: 223  KFQNNK---EDRSNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTT 279

Query: 1044 DRKVTITGSQDAISTAEGMIMQKIAHATE 1130
            DRKVTITGSQ AI  AE MIMQK+A A+E
Sbjct: 280  DRKVTITGSQRAIRAAESMIMQKVASASE 308


>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  395 bits (1016), Expect = e-107
 Identities = 219/329 (66%), Positives = 249/329 (75%)
 Frame = +3

Query: 144  MESTDSPYNSSGEEEAPPSDSIPIESLTLEENEKPTYIRLLVSNGAAGSVIGKGGSTINE 323
            MES +S Y SS   E PP  S P  S T +  EK TYIR LVSN AAGSVIGKGGSTIN+
Sbjct: 49   MESPESAYVSS--PEVPPKRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTIND 106

Query: 324  FQSQSGARIQLSRNNEFFPGTSDRIVKVSGTFDEIMNAVELILGKLGDEVHDEDGNDYDP 503
            FQSQSGARIQLSRN+EFFPGTSDRI+ +SG  +EI+ A+ELIL KL  E+H EDG++ DP
Sbjct: 107  FQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADP 166

Query: 504  RAKVRIIVPNSSCXXXXXXXXATIKSFIEDSHAGIKISPQDNNYSGLNDRLVTIAGSFDE 683
            R+KVR+IVPNSSC        +TIKSFIEDS A IKISPQDNNY GL DRLVT+ GS +E
Sbjct: 167  RSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEE 226

Query: 684  QMRATFLVLSKLADDSHYMQYMNAPFSYAGFNFSNSPYGYTNPSAGILPRNGTYXXXXXX 863
            QMRA  L+LSKL +D HY Q+MNAPFSYA   +++  YG  N + G              
Sbjct: 227  QMRAIDLILSKLTEDPHYTQFMNAPFSYAA-AYNSMNYG-PNGAGG-------------- 270

Query: 864  KFQNNKVYQEDRSNSFTFGVADEHIGLVVGRGGRNIMEISQASGARIKISDRGDFIAGTS 1043
            KFQNNK   EDRSNS T GVADEHIGLVVGRGGRNIM+ISQASGARIKISDRGDF++GT+
Sbjct: 271  KFQNNK---EDRSNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTT 327

Query: 1044 DRKVTITGSQDAISTAEGMIMQKIAHATE 1130
            DRKVTITGSQ AI  AE MIMQK+A A+E
Sbjct: 328  DRKVTITGSQRAIRAAESMIMQKVASASE 356


>gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
          Length = 334

 Score =  389 bits (999), Expect = e-105
 Identities = 207/334 (61%), Positives = 246/334 (73%), Gaps = 5/334 (1%)
 Frame = +3

Query: 144  MESTDSPYNSSGEEEAPPSDSIPIESLTLEENEKPTYIRLLVSNGAAGSVIGKGGSTINE 323
            MES +S Y SS E     + S P +S + +  EKPTY+R LVSN AAGSVIGKGGSTI +
Sbjct: 1    MESPESSYVSSPEGPRKHASSPPPDSPSQDSVEKPTYVRFLVSNSAAGSVIGKGGSTITD 60

Query: 324  FQSQSGARIQLSRNNEFFPGTSDRIVKVSGTFDEIMNAVELILGKLGDEVHDEDGNDYDP 503
            FQSQSGARIQLSRNNEFFPGT+DRI+ VSG  +E++ AVELIL KL  E+H ED ND +P
Sbjct: 61   FQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEVLRAVELILSKLLSELHSEDDNDVEP 120

Query: 504  RAKVRIIVPNSSCXXXXXXXXATIKSFIEDSHAGIKISPQDNNYSGLNDRLVTIAGSFDE 683
            + KVR+IVPN SC        ATI+SFIE+S AGIKISPQDN+Y G NDR+VT+ G+ DE
Sbjct: 121  KTKVRLIVPNGSCGGIIGKGGATIRSFIEESQAGIKISPQDNSYYGQNDRIVTVTGTLDE 180

Query: 684  QMRATFLVLSKLADDSHYMQYMNAPFSYAG---FNFSNSPYGYTNPSAGILPRNGT--YX 848
            QMR   L++SKLA+D HY   M++PF+Y+G     +   PY Y  PS      NG     
Sbjct: 181  QMRGIDLIVSKLAEDPHYSHSMSSPFTYSGAYVSGYQGVPYTYVLPSVAPPAYNGVNYRP 240

Query: 849  XXXXXKFQNNKVYQEDRSNSFTFGVADEHIGLVVGRGGRNIMEISQASGARIKISDRGDF 1028
                 KFQN+K   EDRSNS T GVADEHIGLVVGRGGRNI +ISQ SGA+IKISDRGD+
Sbjct: 241  NGTGAKFQNSK---EDRSNSMTIGVADEHIGLVVGRGGRNISDISQTSGAKIKISDRGDY 297

Query: 1029 IAGTSDRKVTITGSQDAISTAEGMIMQKIAHATE 1130
            I+GT+DRKVTITGSQ AI TAE MI+QK+A+ATE
Sbjct: 298  ISGTTDRKVTITGSQRAIRTAESMILQKVAYATE 331