BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011805
         (1611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518926.1| RNA-binding protein, putative [Ricinus commu...   441   e-121
ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245...   440   e-121
ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vi...   438   e-120
emb|CBI34603.3| unnamed protein product [Vitis vinifera]              438   e-120
ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis ...   431   e-118

>ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
            gi|223541913|gb|EEF43459.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 379

 Score =  441 bits (1134), Expect = e-121
 Identities = 230/300 (76%), Positives = 252/300 (84%), Gaps = 17/300 (5%)
 Frame = -2

Query: 1160 YERSNGGGDVDEGFKRDMKDLEELLSKLNPMAEEFVPPSLANG----------GGSAGNF 1011
            ++RS+GGGD+    +RD+++L+EL SKLNPMAEEFVPPSLAN            G    F
Sbjct: 84   HQRSSGGGDL----QRDIRELQELFSKLNPMAEEFVPPSLANNKISNNYIHGLNGLNVGF 139

Query: 1010 YFNN------FMMDNKFGNGIVNGTTGRRKK-FNQGKRRMNTRTSMAQREEVIRRTVYVS 852
            Y NN      FM+ N   NG +NG+  RRKK +NQGKRR+N+RTSMAQREE+IRRTVYVS
Sbjct: 140  YTNNNNYDPAFMLTNASRNGQLNGSAARRKKNYNQGKRRLNSRTSMAQREEIIRRTVYVS 199

Query: 851  DIDQQVTEEQLAALFINCGGVVDCRICGDPNSVLRFAFIEFTDEEGARTALSLAGTMLGY 672
            DIDQQVTEEQLAALF+ CG VVDCRICGDPNSVLRFAFIEFT EEGAR AL+LAGT+LGY
Sbjct: 200  DIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTHEEGARAALNLAGTVLGY 259

Query: 671  YPVRVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVTQADVKLFFESICGEVY 492
            YPVRVLPSKTAIAPVNPTFLPRS+DEREMC RTIYCTNIDKKVTQADVKLFFES+CGEVY
Sbjct: 260  YPVRVLPSKTAIAPVNPTFLPRSDDEREMCIRTIYCTNIDKKVTQADVKLFFESVCGEVY 319

Query: 491  RLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVXXXXXXXPIH 312
            RLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPV       P+H
Sbjct: 320  RLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRIPMH 379


>ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245327 [Vitis vinifera]
            gi|302143972|emb|CBI23077.3| unnamed protein product
            [Vitis vinifera]
          Length = 361

 Score =  440 bits (1131), Expect = e-121
 Identities = 231/289 (79%), Positives = 247/289 (85%), Gaps = 4/289 (1%)
 Frame = -2

Query: 1166 FGYERSNGGGDVDEGFKRDMKDLEELLSKLNPMAEEFVPPSLANGGG-SAGNF--YFNNF 996
            FG +R +GG         D++DLE+LLSKLNPMAEEFVPPSLANG G SAG    Y NNF
Sbjct: 84   FGRDREDGG---------DIRDLEDLLSKLNPMAEEFVPPSLANGHGWSAGAAFGYTNNF 134

Query: 995  MMDNKFGNGIVNGTTGRRKKFNQG-KRRMNTRTSMAQREEVIRRTVYVSDIDQQVTEEQL 819
            ++   FGN   NG  GRRK+ N   KRR+N+RTSMAQREEVI+RTVYVSDIDQQVTEE L
Sbjct: 135  VLQANFGNA--NGNAGRRKRNNYNQKRRINSRTSMAQREEVIKRTVYVSDIDQQVTEEDL 192

Query: 818  AALFINCGGVVDCRICGDPNSVLRFAFIEFTDEEGARTALSLAGTMLGYYPVRVLPSKTA 639
            AALFINCG VVDCRICGDPNSVLRFAF+EFTDEEGAR ALSLAGTMLGYYPVRVLPSKTA
Sbjct: 193  AALFINCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTA 252

Query: 638  IAPVNPTFLPRSEDEREMCARTIYCTNIDKKVTQADVKLFFESICGEVYRLRLLGDYHHS 459
            IAPVNPTFLPRSEDEREMCARTIYCTNIDKKVTQA+VKLFFESICGEV+RLRLLGDYHHS
Sbjct: 253  IAPVNPTFLPRSEDEREMCARTIYCTNIDKKVTQAEVKLFFESICGEVHRLRLLGDYHHS 312

Query: 458  TRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVXXXXXXXPIH 312
            TRIAFVEFVMAESAIAALNCSG +LGSLPIRVSPSKTPV        +H
Sbjct: 313  TRIAFVEFVMAESAIAALNCSGAILGSLPIRVSPSKTPVRPRAPRPALH 361


>ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vitis vinifera]
          Length = 398

 Score =  438 bits (1127), Expect = e-120
 Identities = 232/286 (81%), Positives = 246/286 (86%), Gaps = 5/286 (1%)
 Frame = -2

Query: 1154 RSNGGG---DVDEGFKRDMKDLEELLSKLNPMAEEFVPPSLANGGGSAGNFYFNNFMMDN 984
            RSNGG    + D G   DM++L+EL SKLNPMAEEFVPPSLAN G + G FY N     N
Sbjct: 119  RSNGGHLQRNGDSGV--DMRELQELFSKLNPMAEEFVPPSLANNGLNGG-FYSNGSETHN 175

Query: 983  KFGNGIVNGTTGRRKK--FNQGKRRMNTRTSMAQREEVIRRTVYVSDIDQQVTEEQLAAL 810
               NG VNG   RRKK  F QGKRRMN+RTSMAQREE+IRRTVYVSDIDQQVTEE+LAAL
Sbjct: 176  NTRNGQVNG---RRKKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVTEEKLAAL 232

Query: 809  FINCGGVVDCRICGDPNSVLRFAFIEFTDEEGARTALSLAGTMLGYYPVRVLPSKTAIAP 630
            FI CG VVDCR+CGDPNSVLRFAF+EFTDEEGAR ALSLAGTMLGYYPVRVLPSKTAIAP
Sbjct: 233  FITCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAP 292

Query: 629  VNPTFLPRSEDEREMCARTIYCTNIDKKVTQADVKLFFESICGEVYRLRLLGDYHHSTRI 450
            VNPTFLPR+EDEREMCARTIYCTNIDKKV+QADVKLFFES+CGEVYRLRLLGDYHHSTRI
Sbjct: 293  VNPTFLPRNEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRI 352

Query: 449  AFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVXXXXXXXPIH 312
            AFVEF+MAESAIAALNCSGVVLGSLPIRVSPSKTPV       PIH
Sbjct: 353  AFVEFIMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPIH 398


>emb|CBI34603.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score =  438 bits (1127), Expect = e-120
 Identities = 229/284 (80%), Positives = 244/284 (85%), Gaps = 3/284 (1%)
 Frame = -2

Query: 1154 RSNGGG---DVDEGFKRDMKDLEELLSKLNPMAEEFVPPSLANGGGSAGNFYFNNFMMDN 984
            RSNGG    + D G   DM++L+EL SKLNPMAEEFVPPSLAN G + G FY N     N
Sbjct: 119  RSNGGHLQRNGDSGV--DMRELQELFSKLNPMAEEFVPPSLANNGLNGG-FYSNGSETHN 175

Query: 983  KFGNGIVNGTTGRRKKFNQGKRRMNTRTSMAQREEVIRRTVYVSDIDQQVTEEQLAALFI 804
               NG VNG   R+  F QGKRRMN+RTSMAQREE+IRRTVYVSDIDQQVTEE+LAALFI
Sbjct: 176  NTRNGQVNGR--RKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVTEEKLAALFI 233

Query: 803  NCGGVVDCRICGDPNSVLRFAFIEFTDEEGARTALSLAGTMLGYYPVRVLPSKTAIAPVN 624
             CG VVDCR+CGDPNSVLRFAF+EFTDEEGAR ALSLAGTMLGYYPVRVLPSKTAIAPVN
Sbjct: 234  TCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVN 293

Query: 623  PTFLPRSEDEREMCARTIYCTNIDKKVTQADVKLFFESICGEVYRLRLLGDYHHSTRIAF 444
            PTFLPR+EDEREMCARTIYCTNIDKKV+QADVKLFFES+CGEVYRLRLLGDYHHSTRIAF
Sbjct: 294  PTFLPRNEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAF 353

Query: 443  VEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVXXXXXXXPIH 312
            VEF+MAESAIAALNCSGVVLGSLPIRVSPSKTPV       PIH
Sbjct: 354  VEFIMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPIH 397


>ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
            gi|6714278|gb|AAF25974.1|AC017118_11 F6N18.17
            [Arabidopsis thaliana] gi|332193408|gb|AEE31529.1|
            CTC-interacting domain 11 protein [Arabidopsis thaliana]
          Length = 358

 Score =  431 bits (1107), Expect = e-118
 Identities = 223/287 (77%), Positives = 241/287 (83%), Gaps = 10/287 (3%)
 Frame = -2

Query: 1142 GGDVDEGFKRDMKDLEELLSKLNPMAEEFVPPSLANGGG---------SAGNFYFNN-FM 993
            G D  E FKRDM++L+EL SKLNPMAEEFVPPSL   GG         SAG+F+ NN F 
Sbjct: 72   GVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGFA 131

Query: 992  MDNKFGNGIVNGTTGRRKKFNQGKRRMNTRTSMAQREEVIRRTVYVSDIDQQVTEEQLAA 813
                 G G  NG   R+K F QGKRRMN RTSMAQRE+VIRRTVYVSD+DQQVTEEQLA 
Sbjct: 132  GTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAG 191

Query: 812  LFINCGGVVDCRICGDPNSVLRFAFIEFTDEEGARTALSLAGTMLGYYPVRVLPSKTAIA 633
            LF++CG VVDCRICGDPNSVLRFAFIEFTDEEGA TAL+L+GTMLG+YPV+VLPSKTAIA
Sbjct: 192  LFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIA 251

Query: 632  PVNPTFLPRSEDEREMCARTIYCTNIDKKVTQADVKLFFESICGEVYRLRLLGDYHHSTR 453
            PVNPTFLPR+EDEREMCARTIYCTNIDKKVTQ+DVK+FFES CGEVYRLRLLGDY HSTR
Sbjct: 252  PVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTR 311

Query: 452  IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVXXXXXXXPIH 312
            IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPV       P+H
Sbjct: 312  IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRHPMH 358