BLASTX nr result
ID: Cimicifuga21_contig00011789
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00011789
(1608 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2... 139 3e-30
ref|XP_002517454.1| conserved hypothetical protein [Ricinus comm... 130 8e-28
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g... 125 2e-26
gb|ABR18789.1| class S F-box protein [Nicotiana alata] 124 5e-26
dbj|BAJ24882.1| S5-locus linked F-box protein [Petunia x hybrida] 120 8e-25
>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
predicted protein [Populus trichocarpa]
Length = 477
Score = 139 bits (349), Expect = 3e-30
Identities = 105/346 (30%), Positives = 157/346 (45%), Gaps = 9/346 (2%)
Frame = +2
Query: 128 STLPKDVTFDILSRLPIKSISECRWVSKTWYSFIRHPLLAKLHYSRAIQSCSICAVFRGW 307
S LP DILSRLP K+I C V K W I P AKLH++RA S + + G
Sbjct: 33 SALPIQNLVDILSRLPFKTIFSCMCVCKKWKDLILAPDFAKLHHTRAPASLILRSHRHGR 92
Query: 308 YKQFYLVDHECFENFNTSATAYPLEFKEFKENFTAHETRNCYEVVGCAHGMICFSPEPGD 487
++ + C + S P + +F T N +E+V +G+IC
Sbjct: 93 RRRPRSL---CLLDLEASDICSPDAAVKLSPDF-GFPTGN-FEIVNTCNGLICIR----- 142
Query: 488 YFHQ-SPYYICNPITGDYIMTPKSPKIHVEPLISGFGVDLVNDKYKLVRILPESSEKGNK 664
+FH + I NP+ GDYI P + K H + S FG D+YK+++ + + S+ +
Sbjct: 143 HFHSPNDISILNPLVGDYITLPLTKKKHKSYVFSWFGHSPKTDEYKVIQFVQQPSKL--E 200
Query: 665 VEVYTLSSGSWREISTN-LPPLTGMATCNVFVNGCLHWVA---YQQPVILCFNVATEEFS 832
E++TL G+W I L P M N FV GCLHW+ + I C E F
Sbjct: 201 AEIHTLGKGTWTSIHGGALSPPIDMRCHNAFVGGCLHWIVNDPSKSEFIYCLEFGRELFQ 260
Query: 833 IMQQP--FNANNAGVFSFHGLTVLRDCLCFIDCSFFNDYSTDKEVWVMKDHGVHSSWTKE 1006
+ P N+ L VL CL F D + + ++WVMK +GV SWTKE
Sbjct: 261 PVAAPPHLGPNDKDRTGDMMLGVLGGCLYFFDYPLGDSF----DIWVMKQYGVQESWTKE 316
Query: 1007 YVLRRGVISSLWQGS--NEVVQLRNSRILLLNIEGILSYYDPDAKN 1138
++L+ +W + L N IL+ + + Y+P+ ++
Sbjct: 317 FILKNPSTDIIWYWDLYRPISLLSNGEILMSHKSKAMVSYNPEDRS 362
>ref|XP_002517454.1| conserved hypothetical protein [Ricinus communis]
gi|223543465|gb|EEF44996.1| conserved hypothetical
protein [Ricinus communis]
Length = 401
Score = 130 bits (328), Expect = 8e-28
Identities = 98/328 (29%), Positives = 153/328 (46%), Gaps = 20/328 (6%)
Frame = +2
Query: 116 ADLFSTLPKDVTFDILSRLPIKSISECRWVSKTWYSFIRHPLLAKLHYSRAIQSCSICAV 295
++ F LP+++ FDILSR PI S+ EC+ VS+ WY+ +R+PLLA +H +RA +
Sbjct: 16 SESFEKLPQEIYFDILSRQPIVSLLECKPVSRHWYTSVRNPLLANMHLNRAAEQNLCLLF 75
Query: 296 FRGWYK---QFYLVDHECFENFNTSATAYPLEFKEFKENFTAHETRNCYEVVGCAHGMIC 466
F W + + V+H T T + EF EVVG +G+IC
Sbjct: 76 FSDWPRSKLELVQVEHPEPRKLKTLKTPFESVLSEF-------------EVVGSCNGLIC 122
Query: 467 FSPEPGDYFHQSPYYICNPITGDYIMTPK---SPKIHVEPLISGFGVDLVNDKYKLVRIL 637
DYF P YI NP T + P+ SP + ++ GFG ++YK+++I+
Sbjct: 123 LY----DYFSDDPLYIYNPFTIECRELPRVEASPHSVICRVVFGFGFHPKMEEYKVIKIV 178
Query: 638 ----PESSEKGNKVEVYTLSSG--SWREISTNLPPLTGMATCNVFVNGCLHWVAY----- 784
+ G E + L++ +WR I L G T VN LHW+ +
Sbjct: 179 YYKQGNNDFSGGAPEAFVLTANTPTWRNIGKIGYDLNG-PTSEALVNEKLHWLTFCLVHE 237
Query: 785 --QQPVILCFNVATEEFSIMQQPFNANNAGVFSFHGLTVLRDCL-CFIDCSFFNDYSTDK 955
+ I+ F++ TE+F + +P ++H L LR CL + C+
Sbjct: 238 EVKYREIVSFDLETEQFQDVPRP-GCGGLDQINYH-LVTLRGCLSAIVSCN-----EGSN 290
Query: 956 EVWVMKDHGVHSSWTKEYVLRRGVISSL 1039
E+W+MK + V +SW KE ++R V L
Sbjct: 291 EIWMMKIYNVKASWRKEMIVRNYVPQGL 318
>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
gi|222861279|gb|EEE98821.1| f-box family protein [Populus
trichocarpa]
Length = 422
Score = 125 bits (315), Expect = 2e-26
Identities = 105/386 (27%), Positives = 170/386 (44%), Gaps = 37/386 (9%)
Frame = +2
Query: 80 RKKK*KMNQPSNADLFSTLPKDVTFDILSRLPIKSISECRWVSKTWYSFIRHPLLAKLHY 259
+++K K+ LP+++ DILSRLPI S+ + + V + W + ++ P L L+
Sbjct: 10 KRRKTKVEYDPQTTGMELLPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYL 69
Query: 260 SRAIQS----CSICAVFRGWYKQFYLVDHECFENFNTSATAYPLEFKEFKENFTAHETRN 427
S + Q C I Y VD E P F F
Sbjct: 70 SCSTQDTDHPCLILHCDFPIRNNLYFVDFAAHEEEKEKVKRIPAPFSSMMPEF------- 122
Query: 428 CYEVVGCAHGMICFSPEPGDYFHQSPYYICNPITGDYIMTPKSPKIHVEPLISGFGVDLV 607
EVVG +G++C S D + YI NP TG Y PKS + + ++SGFG +
Sbjct: 123 --EVVGSCNGLLCLS----DSLYNDSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPK 176
Query: 608 NDKYKLVRILPESSEKG------------NKVEVYTLSSGSWREISTNLPPLTGMATCNV 751
+YK++RI+ + G ++V++ TL WR + L A+
Sbjct: 177 TKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPEWRSLGKVSYRLVRRAS-GA 235
Query: 752 FVNGCLHWVA---YQQPV--ILCFNVATEEFSIMQQPFNANNAGVFSFHGLTVLRDCLCF 916
VNG LHW++ +P ++ F++ E+F + +P + ++H L VLR CL
Sbjct: 236 LVNGRLHWISRPCRNKPARRLVSFDLTDEQFREVSKP-DCGGLNRCNYH-LVVLRGCL-- 291
Query: 917 IDCSFFNDYSTDKEVWVMKDHGVHSSWTKEY----VLRRGVISS------LWQGSNE--- 1057
+ + +Y E+WVMK++ V SW KEY + +G+ + +W+ S+
Sbjct: 292 -SAAVYCNYGR-LEIWVMKEYNVKESWVKEYNIGAYMPKGLKQNQDRQLKIWKNSSNGRV 349
Query: 1058 ---VVQLRNSRILLLNIEGILSYYDP 1126
+ L+N ILL +L YDP
Sbjct: 350 VGALCVLKNGEILLEYKNRVLVSYDP 375
>gb|ABR18789.1| class S F-box protein [Nicotiana alata]
Length = 394
Score = 124 bits (312), Expect = 5e-26
Identities = 105/374 (28%), Positives = 168/374 (44%), Gaps = 24/374 (6%)
Frame = +2
Query: 134 LPKDVTFDILSRLPIKSISECRWVSKTWYSFIRHPLLAKLHYSRAIQSCSICAVFRGWYK 313
LPKDV I+ RL +KS+ + VSKTWY I+ LH S S +F+ YK
Sbjct: 13 LPKDVVIYIILRLQVKSLIRFKCVSKTWYILIQSSTFIYLHLSHTTTSNDELVLFKRSYK 72
Query: 314 Q---FYLVDHECFENFNTSATAYPLEFKEFKENFTAHETRNCYEVVGCAHGMICFSPEPG 484
+ + + + +P+ + T C+ ++G +G+I + +
Sbjct: 73 EEPNRFKSVLSFLSSGHDDDDLHPVSPDLDMQYMTTSSACTCHRIIGPCNGLIFLTDKLN 132
Query: 485 DYFHQSPYYICNPITGDYIMTPKSP-----KIHVEPLISGFGVDLVNDKYKLVRILPESS 649
+ + NP T +Y + SP H GFG DL+ + YK+VRI
Sbjct: 133 N-------VLFNPTTRNYRLLTPSPFGCPLGFHRSINCVGFGFDLIVNDYKIVRISEVRG 185
Query: 650 E--------KGNKVEVYTLSSGSWRE---ISTNLPPLTGMATCNVFVNGCLHWVAYQQP- 793
E + KVEVY L + SWRE ++ LP + ++F +G HW
Sbjct: 186 EPPFYCDSMREWKVEVYELRTDSWRELDQVNLQLPYVHWNPCSDMFYSGASHWFGNANTV 245
Query: 794 VILCFNVATEEFSIMQQPFNANNAGVFSFHGLTVLRDCLCFIDCSF----FNDYSTDKEV 961
VILCF+++TE F M+ P N ++ +GL VL + L I + + ++
Sbjct: 246 VILCFDLSTETFRNMKMP-NTCHSRDEKCYGLVVLNEYLTLICYPYPGKVIDPLKDFMDI 304
Query: 962 WVMKDHGVHSSWTKEYVLRRGVISSLWQGSNEVVQLRNSRILLLNIEGILSYYDPDAKNV 1141
W+MKD+GV+ SW K+Y + I S + ++ +LL + +G L YD +K V
Sbjct: 305 WMMKDYGVNESWIKKYTITPLSIES------PLAVWKDHLLLLQSRKGFLVSYDLKSKEV 358
Query: 1142 SPFEKYYPNPKDVR 1183
F ++ PK +R
Sbjct: 359 KEF-NFHGWPKSLR 371
>dbj|BAJ24882.1| S5-locus linked F-box protein [Petunia x hybrida]
Length = 392
Score = 120 bits (302), Expect = 8e-25
Identities = 103/349 (29%), Positives = 153/349 (43%), Gaps = 40/349 (11%)
Frame = +2
Query: 122 LFSTLPKDVTFDILSRLPIKSISECRWVSKTWYSFIRHPLLAKLHYSRAIQSCSICAVFR 301
L TLP D+T IL LP+K++ + VSKT Y+ I+ LH +R S C + +
Sbjct: 5 LLKTLPNDLTIYILLILPVKALMRLKCVSKTCYTLIQSSAFVDLHLNRKTTSKDECILLK 64
Query: 302 GWYKQFYLVDHECFENFNTSATAYPLEFKEFKENF-----TAHETRNCY----EVVGCAH 454
+ E + TS + + ++ H T NC ++VG H
Sbjct: 65 RSLE-------EGINRYKTSLSFLCGDDHDYLSPIIHDVDVTHLTTNCNFCHDQLVGPCH 117
Query: 455 GMICFSPEPGDYFHQSPYYICNPITGDYIMTPKSPKIHVEPLI-----SGFGVDLVNDKY 619
G+I H + NP T Y + P SP H++ GFG D + + Y
Sbjct: 118 GLIAL-------MHSPTTVLFNPSTRKYKLLPPSPLRHLKGFYRSMEGEGFGFDSIINNY 170
Query: 620 KLVRI--------LPESSEKGNKVEVYTLSSGSWRE---ISTNLPPLTGMATCNVFVNGC 766
K+V+I E G KVEVY LS+ SWRE ++ L L + +F G
Sbjct: 171 KVVKISTIYKVDHFDYLEEIGRKVEVYDLSTDSWRELDHVAQELTTLCCVECTQMFYKGA 230
Query: 767 LHWVAYQQP---VILCFNVATEEFSIMQQPFNANNAGVFSFHG----LTVLRDCLCFIDC 925
HW+A Q ILCF++++E F ++ P N + F G L ++++ L I
Sbjct: 231 CHWIATQDLDAFRILCFDMSSEVFRSLKIPENCH-----LFEGPWCRLALIQESLTLIYY 285
Query: 926 SFFNDYST-----DKEVWVMKDHGVHSSWTKEYVLRRGVISS---LWQG 1048
+ D ST VW+MKD+ VH SW K Y + I S +W+G
Sbjct: 286 R-YPDQSTAQGKDSSVVWIMKDYSVHESWVKNYTITSVPIHSPLAVWKG 333