BLASTX nr result

ID: Cimicifuga21_contig00011779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011779
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38318.3| unnamed protein product [Vitis vinifera]              246   4e-63
emb|CBI38323.3| unnamed protein product [Vitis vinifera]              237   3e-60
ref|XP_002270580.1| PREDICTED: F-box protein PP2-B10-like [Vitis...   237   3e-60
ref|XP_002512603.1| conserved hypothetical protein [Ricinus comm...   228   2e-57
gb|ABK94787.1| unknown [Populus trichocarpa]                          228   2e-57

>emb|CBI38318.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  246 bits (629), Expect = 4e-63
 Identities = 133/269 (49%), Positives = 176/269 (65%), Gaps = 14/269 (5%)
 Frame = +3

Query: 24  SPLSEGRVTHILSFTSPRDXXXXXXXXXXXXXXXDCDLVWEKFLPSDYNDILARSVSSL- 200
           S L EG +  +L+ TSPRD               + D +WE+FLP+DY +I+ARS  S  
Sbjct: 21  SSLPEGCIADVLALTSPRDVCRMSAVASVFLSAAESDALWERFLPADYREIIARSSESSS 80

Query: 201 --HYSSKKGLYSQLCGDPILLDGGNKSFRLEKKSGKKCFMIGARELTIVWGDTPRYWQWI 374
             H+SSKK LY  LC  P+L+D G KSF LEK+SGKKC+M+ +RELTI+WGDTP YW+W 
Sbjct: 81  WRHFSSKKELYFTLCDYPLLIDEGKKSFWLEKRSGKKCYMLASRELTIIWGDTPGYWEWT 140

Query: 375 SRSDSRFAEVAYLKQVWWLEIRGKMETRMLSPKTTYAAYLVIKFDNPANGLTEPPTDASV 554
           S  +SRF EVAYL+ V W EIRGK+ T MLSP+T YAAYLV      ++G  + P ++S+
Sbjct: 141 SLPESRFPEVAYLQAVCWFEIRGKINTCMLSPRTNYAAYLVFHAGR-SHGFEDVPVESSI 199

Query: 555 EFVGGGGSASGVCTVYL-----DPEFTRS-----PHPIQRGDGWMEIEMGEFYNDQGEDG 704
           E V   G+ +    +YL     + E T S     P+P +R D W EIE+GEF+ + GED 
Sbjct: 200 EIV---GNETTTRVIYLARYRKNEEPTSSIRSDLPYPKKREDSWFEIELGEFFIEGGEDT 256

Query: 705 EVEMTLKEA-AGNFKYGLIVQGIELRPKG 788
           E+E+TL E  AG++K GLIV+GIE+RPKG
Sbjct: 257 ELEITLMEVKAGHWKDGLIVEGIEIRPKG 285


>emb|CBI38323.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  237 bits (605), Expect = 3e-60
 Identities = 129/262 (49%), Positives = 170/262 (64%), Gaps = 5/262 (1%)
 Frame = +3

Query: 15  VDISPLSEGRVTHILSFTSPRDXXXXXXXXXXXXXXXDCDLVWEKFLPSDYNDILARSVS 194
           VD S L E  +  IL+ TS RD               + D +WE FLP+DY +I+ RS  
Sbjct: 52  VDFSALPEDCIAGILARTSIRDACRMSTVSPEFLSAAESDALWETFLPADYREIIGRSSE 111

Query: 195 SL---HYSSKKGLYSQLCGDPILLDGGNKSFRLEKKSGKKCFMIGARELTIVWGDTPRYW 365
           S     +SSKK L+ +LC  P+L+DGG KSF L+K+SGKKC+MI ARELTI+W +TPRYW
Sbjct: 112 SSARQDFSSKKELFFRLCNSPLLIDGGKKSFWLDKESGKKCYMIAARELTIIWSETPRYW 171

Query: 366 QWISRSDSRFAEVAYLKQVWWLEIRGKMETRMLSPKTTYAAYLVIKFDNPANGLTEPPTD 545
            WIS   SRF EVA LK VWW  I+GKM T MLSP T YAAYL+ + ++  +G  + P +
Sbjct: 172 TWISPPQSRFTEVANLKIVWWFVIKGKMNTCMLSPCTNYAAYLIFQRNDIFDGFEDNPIE 231

Query: 546 ASVEFVGGGGSASGVCTVYLDPEFTRSPHPIQRGDGWMEIEMGEFYNDQGEDGEVEMTLK 725
           +S+  V GG +A  V  +YLDPE   SP+P  R DGW E+E+GEF+N+  E  E+EM++ 
Sbjct: 232 SSIG-VTGGETAKKV--IYLDPEHDISPNP-TRIDGWYEVELGEFFNEGRESVELEMSIM 287

Query: 726 EAAGNF--KYGLIVQGIELRPK 785
           E    F  K GL+++GIE+RPK
Sbjct: 288 E-VNTFIGKSGLLIEGIEIRPK 308


>ref|XP_002270580.1| PREDICTED: F-box protein PP2-B10-like [Vitis vinifera]
          Length = 277

 Score =  237 bits (605), Expect = 3e-60
 Identities = 129/262 (49%), Positives = 170/262 (64%), Gaps = 5/262 (1%)
 Frame = +3

Query: 15  VDISPLSEGRVTHILSFTSPRDXXXXXXXXXXXXXXXDCDLVWEKFLPSDYNDILARSVS 194
           VD S L E  +  IL+ TS RD               + D +WE FLP+DY +I+ RS  
Sbjct: 18  VDFSALPEDCIAGILARTSIRDACRMSTVSPEFLSAAESDALWETFLPADYREIIGRSSE 77

Query: 195 SL---HYSSKKGLYSQLCGDPILLDGGNKSFRLEKKSGKKCFMIGARELTIVWGDTPRYW 365
           S     +SSKK L+ +LC  P+L+DGG KSF L+K+SGKKC+MI ARELTI+W +TPRYW
Sbjct: 78  SSARQDFSSKKELFFRLCNSPLLIDGGKKSFWLDKESGKKCYMIAARELTIIWSETPRYW 137

Query: 366 QWISRSDSRFAEVAYLKQVWWLEIRGKMETRMLSPKTTYAAYLVIKFDNPANGLTEPPTD 545
            WIS   SRF EVA LK VWW  I+GKM T MLSP T YAAYL+ + ++  +G  + P +
Sbjct: 138 TWISPPQSRFTEVANLKIVWWFVIKGKMNTCMLSPCTNYAAYLIFQRNDIFDGFEDNPIE 197

Query: 546 ASVEFVGGGGSASGVCTVYLDPEFTRSPHPIQRGDGWMEIEMGEFYNDQGEDGEVEMTLK 725
           +S+  V GG +A  V  +YLDPE   SP+P  R DGW E+E+GEF+N+  E  E+EM++ 
Sbjct: 198 SSIG-VTGGETAKKV--IYLDPEHDISPNP-TRIDGWYEVELGEFFNEGRESVELEMSIM 253

Query: 726 EAAGNF--KYGLIVQGIELRPK 785
           E    F  K GL+++GIE+RPK
Sbjct: 254 E-VNTFIGKSGLLIEGIEIRPK 274


>ref|XP_002512603.1| conserved hypothetical protein [Ricinus communis]
           gi|223548564|gb|EEF50055.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 315

 Score =  228 bits (581), Expect = 2e-57
 Identities = 130/293 (44%), Positives = 163/293 (55%), Gaps = 37/293 (12%)
 Frame = +3

Query: 18  DISPLSEGRVTHILSFTSPRDXXXXXXXXXXXXXXXDCDLVWEKFLPSDYNDILARSVSS 197
           D+  L EG V ++LSFT P D               + D VWE FLP+DY+ I++ S SS
Sbjct: 13  DLYELPEGCVANVLSFTGPADVGRLSMVSFTFKSASESDAVWESFLPNDYHSIISSSSSS 72

Query: 198 L---HYSSKKGLYSQLCGDPILLDGGNKSFRLEKKSGKKCFMIGARELTIVWGDTPRYWQ 368
                 SSKK LY +LC  PIL+D G KSF L+K SGKKC+M+ AR+L IVWGDTPRYW+
Sbjct: 73  FLLSSSSSKKDLYLRLCDSPILIDDGKKSFSLDKLSGKKCYMLSARDLMIVWGDTPRYWR 132

Query: 369 WISRSDSRFAEVAYLKQVWWLEIRGKMETRMLSPKTTYAAYLVIKFDNPANGLTEPPTDA 548
           W S   SRF EVA L  V WLEI GK+  RMLSP+T YAAY V K    A G    P + 
Sbjct: 133 WTSELKSRFEEVAELIGVCWLEICGKISARMLSPETLYAAYFVYKTTAGAYGFDHQPVEV 192

Query: 549 SVEFVGGGGSASGVCTVYLDPEFTRSP--------------------------------- 629
           +V   G  G      +VYLD E  R                                   
Sbjct: 193 TVGLAGTEGCKR---SVYLDAERERQQRYQIVIRRIGLFSHSRALGLQAPVPTRENNDGM 249

Query: 630 HPIQRGDGWMEIEMGEFYNDQGEDGEVEMTLKEA-AGNFKYGLIVQGIELRPK 785
           HP +R DGW+EIE+G F+N + +DG++EM + E   G++K GLIVQGI++RPK
Sbjct: 250 HPQEREDGWLEIELGTFFNKEDDDGDLEMKVLEVNGGDWKGGLIVQGIDIRPK 302


>gb|ABK94787.1| unknown [Populus trichocarpa]
          Length = 267

 Score =  228 bits (580), Expect = 2e-57
 Identities = 123/258 (47%), Positives = 155/258 (60%), Gaps = 6/258 (2%)
 Frame = +3

Query: 30  LSEGRVTHILSFTSPRDXXXXXXXXXXXXXXXDCDLVWEKFLPSDYNDIL----ARSVSS 197
           L E  + HI+SFTSPRD               D D VW+ FLPSD+ +I+    A S S 
Sbjct: 7   LPEECLAHIISFTSPRDACGSALVSRNFRSAADSDAVWKGFLPSDHVEIISSSPASSSSQ 66

Query: 198 LHYSSKKGLYSQLCGDPILLDGGNKSFRLEKKSGKKCFMIGARELTIVWGDTPRYWQWIS 377
           L   SKK LY  LC +PIL++ G  SF LEK  GKKC+MIGAR L+I WGDTP YW W  
Sbjct: 67  LTALSKKELYFHLCNNPILVNNGIMSFALEKHGGKKCYMIGARGLSITWGDTPDYWTWKP 126

Query: 378 RSD-SRFAEVAYLKQVWWLEIRGKMETRMLSPKTTYAAYLVIKFDNPANGLTEPPTDASV 554
             D SRF+EVA L+ VWWL++RG+++ ++ SPKTTYAAYLV K  +   G  E   + SV
Sbjct: 127 LPDQSRFSEVAELRYVWWLDVRGRIDAKIFSPKTTYAAYLVFKLTDSTRGFDERLVELSV 186

Query: 555 EFVGGGGSASGVCTVYLDPEFTRSPHPIQRGDGWMEIEMGEFYNDQGEDGEVEMTLKEAA 734
            F    G       + + P++   P P +R DGWMEIEMGEF+ D  +DG V   L+E  
Sbjct: 187 NFEESVGEEKLHVFLDVPPDYDMPPLPRERSDGWMEIEMGEFFYDNEDDGSVVAYLREVD 246

Query: 735 G-NFKYGLIVQGIELRPK 785
               K GLI++GIE RPK
Sbjct: 247 NYTTKNGLIIEGIEFRPK 264


Top