BLASTX nr result

ID: Cimicifuga21_contig00011755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011755
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515331.1| conserved hypothetical protein [Ricinus comm...   119   1e-24
ref|XP_002302741.1| predicted protein [Populus trichocarpa] gi|2...   116   6e-24
ref|XP_002274279.1| PREDICTED: uncharacterized protein LOC100260...   104   3e-20
ref|XP_002320323.1| predicted protein [Populus trichocarpa] gi|2...   103   7e-20
ref|XP_002880306.1| binding protein [Arabidopsis lyrata subsp. l...    99   2e-18

>ref|XP_002515331.1| conserved hypothetical protein [Ricinus communis]
           gi|223545811|gb|EEF47315.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 156

 Score =  119 bits (298), Expect = 1e-24
 Identities = 70/143 (48%), Positives = 92/143 (64%), Gaps = 13/143 (9%)
 Frame = +3

Query: 39  MEGVPAKS-----RYWRRRKGYERLDGSGLRSKSGFAVATLGSSSTT--TQRKRFTWKVK 197
           MEGV A        YWRRR GY+RL+ SG R +        GS++TT  ++R++ +W++K
Sbjct: 1   MEGVSASMYTKIRSYWRRR-GYQRLNESGRRRRMNTVELGGGSATTTRGSRRRKMSWRIK 59

Query: 198 IKRRIRFF---TLKKFFTRLRDGYVKMMLSLANSRVFG--YGGSESIGYGFGKAPLKEYD 362
           IK +++ F   + KKFF  LRD YV MML  ANSRV G  YGG   I   FGK PLKEYD
Sbjct: 60  IKPKLKIFKRASPKKFFVWLRDAYVNMMLGFANSRVIGPGYGGGGGIATNFGKGPLKEYD 119

Query: 363 ERMIIELYKSMMV-QAPVVPRDA 428
           E+MII++YKS++  Q  +VP DA
Sbjct: 120 EKMIIQIYKSLVAGQGQLVPHDA 142


>ref|XP_002302741.1| predicted protein [Populus trichocarpa] gi|222844467|gb|EEE82014.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score =  116 bits (291), Expect = 6e-24
 Identities = 67/139 (48%), Positives = 90/139 (64%), Gaps = 9/139 (6%)
 Frame = +3

Query: 39  MEGVPAK-----SRYWRRRKGYERLDGSGLRSKSGFAVATLGSSSTTTQRKRFTWKVKIK 203
           MEGV A+       YW RR GYER++GSG R++  + V     S+T+ +R+RF W++K+K
Sbjct: 1   MEGVSARIFTKMKEYWSRR-GYERINGSG-RTRRSWPVEVGSVSTTSRRRRRFAWRIKVK 58

Query: 204 RRIRFFTL---KKFFTRLRDGYVKMMLSLANSRVFGYGGSESIGYGFGKAPLKEYDERMI 374
            +++   +   K+FF  LRD YVKMML  ANSR  G  G    G G G  P+KEYDE+MI
Sbjct: 59  PKLKALKMSSPKRFFVWLRDAYVKMMLGFANSRARGTAG---YGDGIGARPIKEYDEKMI 115

Query: 375 IELYKSM-MVQAPVVPRDA 428
           IE+YKS+ M Q  +VPRDA
Sbjct: 116 IEIYKSLVMAQGQLVPRDA 134


>ref|XP_002274279.1| PREDICTED: uncharacterized protein LOC100260563 [Vitis vinifera]
           gi|147780786|emb|CAN70481.1| hypothetical protein
           VITISV_002249 [Vitis vinifera]
          Length = 143

 Score =  104 bits (259), Expect = 3e-20
 Identities = 65/127 (51%), Positives = 86/127 (67%), Gaps = 7/127 (5%)
 Frame = +3

Query: 66  YWRRRKGYERLDGSGLRSKSGFAVATLGSSSTTTQRKRFTWKVKIKRRIRFFTL---KKF 236
           +W R+ GY RL+GSG R K+   +A LGS+    +R+RF W++K K  +RFF +   KKF
Sbjct: 15  FWARKGGYVRLNGSG-RRKNRVELARLGSN----RRRRF-WRIKPK--LRFFRIPSPKKF 66

Query: 237 FTRLRDGYVKMMLSLANSRVF--GYGG--SESIGYGFGKAPLKEYDERMIIELYKSMMVQ 404
           F  LRD YVKMML  ANSRV   GY G   + IG GFG+ P KEYDE+MIIE+Y+S+++ 
Sbjct: 67  FIWLRDAYVKMMLGFANSRVMSSGYSGVLGDGIG-GFGQRPPKEYDEKMIIEIYRSLVMA 125

Query: 405 APVVPRD 425
             + PRD
Sbjct: 126 QGLAPRD 132


>ref|XP_002320323.1| predicted protein [Populus trichocarpa] gi|222861096|gb|EEE98638.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score =  103 bits (256), Expect = 7e-20
 Identities = 65/141 (46%), Positives = 89/141 (63%), Gaps = 11/141 (7%)
 Frame = +3

Query: 39  MEGVPAK-----SRYWRRRKGYERLDGSG-LRSKSGFAVATLGSSSTTTQRKRFTWKVKI 200
           MEG+ A        YW RR GYER++GSG +R K       LGS S+T++ + F+ ++KI
Sbjct: 1   MEGISASMYTKMKGYWSRR-GYERINGSGRIRRKRP---VELGSGSSTSRGRGFSLRIKI 56

Query: 201 KRRIRFFTL---KKFFTRLRDGYVKMMLSLANSRVFGYGGSESIGYGFG-KAPLKEYDER 368
           K +++   +   +KFF  LRD YVKMML LANSR  G  G    G  FG + P+KEYDE+
Sbjct: 57  KPKLKILKMSSPRKFFVWLRDAYVKMMLGLANSRAIGTSG---YGDAFGARRPIKEYDEK 113

Query: 369 MIIELYKSM-MVQAPVVPRDA 428
           MI+++YKS+ M Q  +VP DA
Sbjct: 114 MIVQIYKSLVMTQGQLVPHDA 134


>ref|XP_002880306.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326145|gb|EFH56565.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 141

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 63/127 (49%), Positives = 78/127 (61%), Gaps = 6/127 (4%)
 Frame = +3

Query: 63  RYWRRRKGYERLDGSGLRSKSGFAVATLGSSSTTTQRKRFTWKVKIKRRIRFF---TLKK 233
           RYWRR +GY+RLDGS  ++ SG           T  RKR  W++KI  ++RF    + KK
Sbjct: 4   RYWRRLRGYQRLDGSAKKANSGRRNVKRVKMDPT--RKRQFWRIKIVPKLRFLKKSSPKK 61

Query: 234 FFTRLRDGYVKMMLSLANSRVFG--YGGSESIGYGFGKAPLKEYDERMIIELYKS-MMVQ 404
             T LRD YV MML LANSRV G  YG  E  GYG G A  KEYDE+ ++E+YKS +M Q
Sbjct: 62  LLTWLRDAYVNMMLRLANSRVVGSSYGYGE-YGYGSGLAS-KEYDEKKLVEIYKSILMAQ 119

Query: 405 APVVPRD 425
             +V RD
Sbjct: 120 GNLVHRD 126


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