BLASTX nr result

ID: Cimicifuga21_contig00011736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011736
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511026.1| cyclin-dependent protein kinase, putative [R...   329   6e-88
ref|XP_002327025.1| predicted protein [Populus trichocarpa] gi|2...   318   1e-84
ref|XP_002526473.1| cyclin-dependent protein kinase, putative [R...   317   2e-84
gb|AFK41945.1| unknown [Lotus japonicus]                              306   5e-81
ref|XP_003529016.1| PREDICTED: cyclin-U4-1-like [Glycine max]         305   7e-81

>ref|XP_002511026.1| cyclin-dependent protein kinase, putative [Ricinus communis]
           gi|223550141|gb|EEF51628.1| cyclin-dependent protein
           kinase, putative [Ricinus communis]
          Length = 203

 Score =  329 bits (843), Expect = 6e-88
 Identities = 162/204 (79%), Positives = 182/204 (89%), Gaps = 8/204 (3%)
 Frame = +1

Query: 52  MADLEITPLEMPKVITFLSSLLEKVAETNDHNRQLLLPQKISVFHGLTRPTISIQSYLER 231
           MADLE T + MPKV+TFLSSLL++VAE+ND + QL  PQ+ISVFHGLTRP+IS+QSYLER
Sbjct: 1   MADLEATVVVMPKVVTFLSSLLQRVAESNDLSHQLH-PQRISVFHGLTRPSISVQSYLER 59

Query: 232 IFKYANCSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAY 411
           IFKYANCSPSCFV+AYVYLDRFAQ+QPS PINSFNVHRLLITSV+V+AKFMDD+YYNNAY
Sbjct: 60  IFKYANCSPSCFVIAYVYLDRFAQRQPSFPINSFNVHRLLITSVLVSAKFMDDIYYNNAY 119

Query: 412 YAKVGGISITEMNFLEVDFLFGLSFHLNVTPNTFHTYCSYLQREMLVES--------PLN 567
           YAKVGGIS +EMN LEVDFLFGL F LNVTPNTFHTYCSYLQREMLV+S        PLN
Sbjct: 120 YAKVGGISTSEMNILEVDFLFGLGFQLNVTPNTFHTYCSYLQREMLVQSSQHQLVEPPLN 179

Query: 568 LGRSLKLHCCFNEDESTHQHQLAV 639
           + R+LK+HCCF+EDESTHQ QLAV
Sbjct: 180 MARALKIHCCFSEDESTHQKQLAV 203


>ref|XP_002327025.1| predicted protein [Populus trichocarpa] gi|222835340|gb|EEE73775.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  318 bits (815), Expect = 1e-84
 Identities = 161/200 (80%), Positives = 177/200 (88%), Gaps = 7/200 (3%)
 Frame = +1

Query: 52  MADLEITPLEMPKVITFLSSLLEKVAETNDHNRQLLLPQKISVFHGLTRPTISIQSYLER 231
           MA+LE T + MPK ITFLSSLL++VA++ND NR+   PQKISVFHGLTRPTISIQSYLER
Sbjct: 1   MAELESTKM-MPKSITFLSSLLQRVADSNDLNREFQ-PQKISVFHGLTRPTISIQSYLER 58

Query: 232 IFKYANCSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAY 411
           IFKYANCSPSCFVVAYVYLDRFAQ+QPSLPINS NVHRLLITSV+V+AKFMDDMYYNNAY
Sbjct: 59  IFKYANCSPSCFVVAYVYLDRFAQRQPSLPINSLNVHRLLITSVLVSAKFMDDMYYNNAY 118

Query: 412 YAKVGGISITEMNFLEVDFLFGLSFHLNVTPNTFHTYCSYLQREM-------LVESPLNL 570
           YA+VGGIS  EMN+LEVDFLFGL F+LNVTPNTFHTYCSYLQREM       L ES LNL
Sbjct: 119 YARVGGISTIEMNYLEVDFLFGLGFNLNVTPNTFHTYCSYLQREMMQQPSLNLAESSLNL 178

Query: 571 GRSLKLHCCFNEDESTHQHQ 630
           GRSLK+H CFNEDE++HQ Q
Sbjct: 179 GRSLKVHLCFNEDETSHQQQ 198


>ref|XP_002526473.1| cyclin-dependent protein kinase, putative [Ricinus communis]
           gi|223534148|gb|EEF35864.1| cyclin-dependent protein
           kinase, putative [Ricinus communis]
          Length = 203

 Score =  317 bits (812), Expect = 2e-84
 Identities = 163/205 (79%), Positives = 181/205 (88%), Gaps = 9/205 (4%)
 Frame = +1

Query: 52  MADLEITPLEMPKVITFLSSLLEKVAETNDHNRQLLLPQKISVFHGLTRPTISIQSYLER 231
           MA+LE +P  MPK+ITFLSSLL++VAE+ND N Q+   QKISVFHGLTRPTISIQ+YLER
Sbjct: 1   MAELE-SPNLMPKLITFLSSLLQRVAESNDLNLQIHT-QKISVFHGLTRPTISIQNYLER 58

Query: 232 IFKYANCSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAY 411
           IFKYANCSPSCF+VAYVYLDRFAQ+QPSLP+NSFNVHRLLITSVMVAAKFMDDMYYNNAY
Sbjct: 59  IFKYANCSPSCFIVAYVYLDRFAQRQPSLPLNSFNVHRLLITSVMVAAKFMDDMYYNNAY 118

Query: 412 YAKVGGISITEMNFLEVDFLFGLSFHLNVTPNTFHTYCSYLQREMLVESP--------LN 567
           YAKVGGIS  EMN+LEVDFLFGL FHLNVTPNTFHTY SYLQREM+++ P        LN
Sbjct: 119 YAKVGGISTIEMNYLEVDFLFGLGFHLNVTPNTFHTYSSYLQREMMLQPPLSLVESSSLN 178

Query: 568 LGRSLKLHCCFNEDESTHQ-HQLAV 639
           LGRSLK+H CFNEDE++HQ  QLAV
Sbjct: 179 LGRSLKVHLCFNEDETSHQKQQLAV 203


>gb|AFK41945.1| unknown [Lotus japonicus]
          Length = 207

 Score =  306 bits (783), Expect = 5e-81
 Identities = 154/201 (76%), Positives = 176/201 (87%), Gaps = 8/201 (3%)
 Frame = +1

Query: 52  MADLEITPLEMPKVITFLSSLLEKVAETNDHNRQL-LLPQKISVFHGLTRPTISIQSYLE 228
           MA+LE  P EMPK++ FLSS+L+KVAE+ND N+Q  L+ QKISVFHGLTRPTISIQSYLE
Sbjct: 1   MAELE-NPNEMPKLLAFLSSMLKKVAESNDLNQQQQLIHQKISVFHGLTRPTISIQSYLE 59

Query: 229 RIFKYANCSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNA 408
           RIFKYANCSPSCF+VAYVYLDRF QKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNA
Sbjct: 60  RIFKYANCSPSCFIVAYVYLDRFTQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNA 119

Query: 409 YYAKVGGISITEMNFLEVDFLFGLSFHLNVTPNTFHTYCSYLQREMLV-------ESPLN 567
           YYA+VGGI+  EMNFLE+DFLFGL F+LNVTP TF  YCS+LQREM++       +S L+
Sbjct: 120 YYARVGGITTIEMNFLELDFLFGLGFNLNVTPGTFQGYCSHLQREMMLVQPLIFTDSSLS 179

Query: 568 LGRSLKLHCCFNEDESTHQHQ 630
           LG+S+K H CFNEDES+HQ+Q
Sbjct: 180 LGKSVKAHLCFNEDESSHQNQ 200


>ref|XP_003529016.1| PREDICTED: cyclin-U4-1-like [Glycine max]
          Length = 202

 Score =  305 bits (782), Expect = 7e-81
 Identities = 155/197 (78%), Positives = 167/197 (84%), Gaps = 8/197 (4%)
 Frame = +1

Query: 64  EITPLEMPKVITFLSSLLEKVAETNDHNRQLLLPQKISVFHGLTRPTISIQSYLERIFKY 243
           E +P  MPKVITFLSSLLE+VAE+NDHN+Q    QKISVFHGLTRP ISI SYLERIFKY
Sbjct: 4   EESPSVMPKVITFLSSLLERVAESNDHNQQ---HQKISVFHGLTRPNISIHSYLERIFKY 60

Query: 244 ANCSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAYYAKV 423
           ANCSPSCFVVAYVYLDRF Q+QPSLPIN+FNVHRLLITSVMVAAKFMDDMYYNNAYYAKV
Sbjct: 61  ANCSPSCFVVAYVYLDRFTQRQPSLPINTFNVHRLLITSVMVAAKFMDDMYYNNAYYAKV 120

Query: 424 GGISITEMNFLEVDFLFGLSFHLNVTPNTFHTYCSYLQREMLV--------ESPLNLGRS 579
           GGI+  EMNFLE+DFLFGL FHLNVTP TF  YC  LQREML+        +S LNLG+S
Sbjct: 121 GGITKIEMNFLELDFLFGLGFHLNVTPGTFQAYCVNLQREMLLIQQPLNFADSTLNLGKS 180

Query: 580 LKLHCCFNEDESTHQHQ 630
           LK H CFNEDES+HQ Q
Sbjct: 181 LKAHLCFNEDESSHQKQ 197


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