BLASTX nr result

ID: Cimicifuga21_contig00011726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011726
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_178432.1| uncharacterized protein [Arabidopsis thaliana] ...   121   5e-26
ref|XP_002311324.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|NP_187787.1| uncharacterized protein [Arabidopsis thaliana] ...   120   2e-25
ref|XP_002875200.1| hypothetical protein ARALYDRAFT_484241 [Arab...   119   2e-25
ref|XP_003607769.1| hypothetical protein MTR_4g082550 [Medicago ...   101   6e-20

>ref|NP_178432.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4335772|gb|AAD17449.1| unknown protein [Arabidopsis
           thaliana] gi|330250594|gb|AEC05688.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 385

 Score =  121 bits (304), Expect = 5e-26
 Identities = 69/159 (43%), Positives = 92/159 (57%), Gaps = 8/159 (5%)
 Frame = -3

Query: 455 GFEIDYSSIYFRVLYVIGEVVFGVGLLCLYVNWVLAPVIVVVESSWGLEPLRRSVYLVKG 276
           G E DY+S YF+    +  ++     + LYVNW+LA V+VVVES+WG+ PL+ S  LVKG
Sbjct: 211 GVEFDYASSYFQGFVTLVTIISIAVAVKLYVNWILAWVVVVVESAWGITPLKTSKRLVKG 270

Query: 275 MRXXXXXXXXXXXGTMLFFWWGSSAPL--------PGSGILRGFFFVVRTVMFSAVLMLY 120
           M+            T     W S+            G    +G FF V+  + SA+L L 
Sbjct: 271 MKCASLSIIFFFASTESILVWISTLAAYALLNDNENGGKSWKGSFFFVQNWITSALLTLL 330

Query: 119 LLHSMSVNTVLYMSCKALQGELAGEIAEEFAREYVSLPF 3
           +L+++   TV+YM CKA+ GEL GEIAEEFAREYVSLPF
Sbjct: 331 MLYNLVATTVMYMYCKAVHGELVGEIAEEFAREYVSLPF 369


>ref|XP_002311324.1| predicted protein [Populus trichocarpa] gi|222851144|gb|EEE88691.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  120 bits (301), Expect = 1e-25
 Identities = 80/169 (47%), Positives = 101/169 (59%), Gaps = 13/169 (7%)
 Frame = -3

Query: 470 GIEYHGFEIDYSSIYFRVLYVIGEVVFGVGLLCLYVNWVLAPVIVVVESSWGLEPLRRSV 291
           GI+  GFEI+ SS YF V  VI  VV    LL L + W+LA VIVV ESSWGLEPLRRS 
Sbjct: 158 GIQLPGFEINVSSPYFIVFLVILGVVLVFVLLHLQLKWILAQVIVVAESSWGLEPLRRSD 217

Query: 290 YLVKGMRXXXXXXXXXXXGTMLFFWWGS-----SAPLPGSGILRG--------FFFVVRT 150
           YL+K M+             +LFF + S     ++  P  G+  G        + FVVR 
Sbjct: 218 YLMKRMK-------GVALSMVLFFGFFSGLLVIASSFPWEGLHVGNIDSAWKIWPFVVRI 270

Query: 149 VMFSAVLMLYLLHSMSVNTVLYMSCKALQGELAGEIAEEFAREYVSLPF 3
           V+ SA+ M+  L++++   VLYM CKA+ GEL  EIAEEFA +YVSLPF
Sbjct: 271 VVTSALQMVLQLYNIAAFAVLYMDCKAVHGELVLEIAEEFAGDYVSLPF 319


>ref|NP_187787.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6671937|gb|AAF23197.1|AC016795_10 unknown protein
           [Arabidopsis thaliana] gi|332641580|gb|AEE75101.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 348

 Score =  120 bits (300), Expect = 2e-25
 Identities = 70/159 (44%), Positives = 91/159 (57%), Gaps = 8/159 (5%)
 Frame = -3

Query: 455 GFEIDYSSIYFRVLYVIGEVVFGVGLLCLYVNWVLAPVIVVVESSWGLEPLRRSVYLVKG 276
           G E DY+S YF+    +  ++     + LYVNW+LA V+VVVES+WG+ PL+RS  LVKG
Sbjct: 174 GVEFDYASSYFQGFVTLVTIISIAIAVKLYVNWILAWVVVVVESAWGITPLKRSKRLVKG 233

Query: 275 MRXXXXXXXXXXXGTMLFFWWGSSAPL--------PGSGILRGFFFVVRTVMFSAVLMLY 120
           M+            T     W S+            G       FFVV+ V+ SA L L 
Sbjct: 234 MKCASLSIIFFFASTESILVWISTLAAYAQLNDNENGGKSWTDAFFVVQIVITSAFLTLL 293

Query: 119 LLHSMSVNTVLYMSCKALQGELAGEIAEEFAREYVSLPF 3
            L++++  TV+YM CKA+ GEL  EIAEEFAREYVSLPF
Sbjct: 294 TLYNLAATTVMYMYCKAVHGELVWEIAEEFAREYVSLPF 332


>ref|XP_002875200.1| hypothetical protein ARALYDRAFT_484241 [Arabidopsis lyrata subsp.
           lyrata] gi|297321038|gb|EFH51459.1| hypothetical protein
           ARALYDRAFT_484241 [Arabidopsis lyrata subsp. lyrata]
          Length = 344

 Score =  119 bits (299), Expect = 2e-25
 Identities = 71/154 (46%), Positives = 92/154 (59%), Gaps = 8/154 (5%)
 Frame = -3

Query: 440 YSSIYFRVLYVIGEVVFGVGLLCLYVNWVLAPVIVVVESSWGLEPLRRSVYLVKGMRXXX 261
           YSS YF+   ++  ++     + LYVNW+LA V+VVVES+WGL PL+RS  LVKGM+   
Sbjct: 175 YSSSYFQGFIIVVTIMSIAITIKLYVNWILAWVVVVVESAWGLTPLKRSNSLVKGMKGVS 234

Query: 260 XXXXXXXXGTMLFFWW----GSSAPLP----GSGILRGFFFVVRTVMFSAVLMLYLLHSM 105
                    T     W     +SA L     G  +    FFVV+ V+ SA L L  L+++
Sbjct: 235 LSIIFFFASTESILVWISTLAASAQLNDDENGGKLWTNAFFVVQIVITSAFLTLLTLYNL 294

Query: 104 SVNTVLYMSCKALQGELAGEIAEEFAREYVSLPF 3
           +  TV+YM CKA+ GEL  EIAEEFAREYVSLPF
Sbjct: 295 AATTVMYMYCKAVHGELVWEIAEEFAREYVSLPF 328


>ref|XP_003607769.1| hypothetical protein MTR_4g082550 [Medicago truncatula]
           gi|355508824|gb|AES89966.1| hypothetical protein
           MTR_4g082550 [Medicago truncatula]
          Length = 339

 Score =  101 bits (252), Expect = 6e-20
 Identities = 56/137 (40%), Positives = 83/137 (60%), Gaps = 5/137 (3%)
 Frame = -3

Query: 398 VVFGVGLLCLYV--NWVLAPVIVVVESSWGLEPLRRSVYLVKGMRXXXXXXXXXXXGTML 225
           +V  + LL  Y+  +W L+ VI +VE+++G++PLRRS +L+ GM+               
Sbjct: 189 LVLALSLLIFYIRISWTLSSVIAIVENTYGIQPLRRSAHLMNGMKYTGASCFFFFASLEG 248

Query: 224 FFWWGS---SAPLPGSGILRGFFFVVRTVMFSAVLMLYLLHSMSVNTVLYMSCKALQGEL 54
              W     +  +  SG  R + F+V+ V+ SAV+ + +L++ + NTVLYM CKAL GEL
Sbjct: 249 IMLWSGFLLARVVSDSGSWRDWAFMVQIVLTSAVMTVLMLYNAAANTVLYMYCKALHGEL 308

Query: 53  AGEIAEEFAREYVSLPF 3
           A EI EEFA +YVSLPF
Sbjct: 309 AEEIVEEFAWQYVSLPF 325


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