BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011725
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320575.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_003604069.1| Replication factor C subunit [Medicago trunc...    78   9e-13
ref|XP_002265263.2| PREDICTED: uncharacterized protein LOC100265...    77   1e-12
ref|XP_002533677.1| Replication factor C subunit, putative [Rici...    76   3e-12
ref|NP_001065475.2| Os10g0574500 [Oryza sativa Japonica Group] g...    64   1e-08

>ref|XP_002320575.1| predicted protein [Populus trichocarpa] gi|222861348|gb|EEE98890.1|
           predicted protein [Populus trichocarpa]
          Length = 725

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 7/81 (8%)
 Frame = -3

Query: 222 RNECKEFALKGEALPSIKVNVQISSQHVEINTSELGGYEKHVVVELIKQKHNMALDQAMQ 43
           R ECK F LKGE + SI+V V++SSQHVE+N S+L GYEK V+VELIK+ HN    + + 
Sbjct: 380 REECKSFNLKGEQIGSIQVRVKVSSQHVEVNLSDLKGYEKQVIVELIKETHNNHNKRIIS 439

Query: 42  CDHTN-------CQAIILHEA 1
            +  N       C+AIIL+EA
Sbjct: 440 NNPINPKSRLDDCRAIILYEA 460


>ref|XP_003604069.1| Replication factor C subunit [Medicago truncatula]
           gi|355493117|gb|AES74320.1| Replication factor C subunit
           [Medicago truncatula]
          Length = 800

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 36/72 (50%), Positives = 51/72 (70%)
 Frame = -3

Query: 216 ECKEFALKGEALPSIKVNVQISSQHVEINTSELGGYEKHVVVELIKQKHNMALDQAMQCD 37
           E K+F LKGE + ++K+ VQ S  HVE+N SE  GYEK+V+VEL K+ +   ++ ++ C 
Sbjct: 489 EYKDFNLKGEMVENLKLRVQKSLHHVEVNLSEAKGYEKNVIVELFKETYGKVINSSLPCS 548

Query: 36  HTNCQAIILHEA 1
             NCQAIIL+EA
Sbjct: 549 PENCQAIILYEA 560


>ref|XP_002265263.2| PREDICTED: uncharacterized protein LOC100265748 [Vitis vinifera]
          Length = 659

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/75 (49%), Positives = 56/75 (74%)
 Frame = -3

Query: 225 TRNECKEFALKGEALPSIKVNVQISSQHVEINTSELGGYEKHVVVELIKQKHNMALDQAM 46
           TR ECKEF LKGE++ SI+VNV++S  H+E+N S+L GYEK V+V+LI +  N   ++A+
Sbjct: 357 TREECKEFYLKGESIRSIRVNVKVSCHHIEVNLSDLKGYEKQVIVQLIHETGNNRANKAV 416

Query: 45  QCDHTNCQAIILHEA 1
           + +    Q+I+L+EA
Sbjct: 417 RVNQ-EVQSIVLYEA 430


>ref|XP_002533677.1| Replication factor C subunit, putative [Ricinus communis]
           gi|223526428|gb|EEF28707.1| Replication factor C
           subunit, putative [Ricinus communis]
          Length = 661

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/75 (48%), Positives = 54/75 (72%)
 Frame = -3

Query: 225 TRNECKEFALKGEALPSIKVNVQISSQHVEINTSELGGYEKHVVVELIKQKHNMALDQAM 46
           TR E K F L+GE++ SI+V +++SSQH+E+N S++ GYEKH+VVELIK+  +      +
Sbjct: 361 TREESKAFRLRGESIGSIEVRIKVSSQHIEVNLSDMKGYEKHIVVELIKETDDKKSRNYL 420

Query: 45  QCDHTNCQAIILHEA 1
              H +C+AIIL+ A
Sbjct: 421 P-KHDSCRAIILYNA 434


>ref|NP_001065475.2| Os10g0574500 [Oryza sativa Japonica Group]
           gi|255679664|dbj|BAF27312.2| Os10g0574500 [Oryza sativa
           Japonica Group]
          Length = 516

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/77 (38%), Positives = 44/77 (57%)
 Frame = -3

Query: 231 LLTRNECKEFALKGEALPSIKVNVQISSQHVEINTSELGGYEKHVVVELIKQKHNMALDQ 52
           L    + K F LKGE    I + V+ISS HVE+N +++ GYEKHV+  L+ +        
Sbjct: 240 LKIEEQTKRFELKGEIAKHIDIRVKISSHHVEVNLADIHGYEKHVITTLLNES---IPSP 296

Query: 51  AMQCDHTNCQAIILHEA 1
              C H NC+ I++H+A
Sbjct: 297 NSICSHANCRVIVVHDA 313