BLASTX nr result

ID: Cimicifuga21_contig00011713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011713
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548621.1| PREDICTED: uncharacterized protein LOC100799...   155   3e-36
gb|ACU19833.1| unknown [Glycine max]                                  153   1e-35
ref|XP_002511928.1| conserved hypothetical protein [Ricinus comm...   153   1e-35
ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258...   152   4e-35
ref|XP_002301379.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30

>ref|XP_003548621.1| PREDICTED: uncharacterized protein LOC100799820 [Glycine max]
          Length = 219

 Score =  155 bits (392), Expect = 3e-36
 Identities = 80/167 (47%), Positives = 114/167 (68%), Gaps = 5/167 (2%)
 Frame = +2

Query: 14  RCVGGCISGSLCLALLITVLMLTVFRVKKPEINISRITIPHFSLNNLPPI-----LKIIA 178
           RC    IS  L +A++I VL+ TVFRVK P I ++ I I    L N         + ++A
Sbjct: 39  RCACPLIS-LLLIAIVIIVLIFTVFRVKDPVITMNSIKITKLQLVNTMSQQPGANMSLVA 97

Query: 179 EMDIKNRNIASYKYDNSTTLLYYHGKKVGEAHNPQGMAKARRTRNMNLSMEIITEKVMGD 358
           ++ +KN N+AS++Y N+TT LYYHG  VGEA  P G AKARRT  MN+++++IT +V+  
Sbjct: 98  DVSVKNPNVASFRYSNTTTSLYYHGVIVGEARGPPGRAKARRTLRMNVTIDVITARVISS 157

Query: 359 PSFFTEFGSGLLMMSSYTRLDGRVRIMKIIKKHVVVTMNCTMTANVT 499
           P F T+ GSGLL MSS++R+ G+V+I+ +IK+HVVV MNCT T N++
Sbjct: 158 PDFVTDLGSGLLTMSSFSRVPGQVKILNLIKRHVVVKMNCTTTFNIS 204


>gb|ACU19833.1| unknown [Glycine max]
          Length = 219

 Score =  153 bits (387), Expect = 1e-35
 Identities = 79/167 (47%), Positives = 113/167 (67%), Gaps = 5/167 (2%)
 Frame = +2

Query: 14  RCVGGCISGSLCLALLITVLMLTVFRVKKPEINISRITIPHFSLNNLPPI-----LKIIA 178
           RC    IS  L +A++I VL+ TVFRVK P I ++ I I    L N         + ++A
Sbjct: 39  RCACPLIS-LLLIAIVIIVLIFTVFRVKDPVITMNSIKITKLQLVNTMSQQPGANMSLVA 97

Query: 179 EMDIKNRNIASYKYDNSTTLLYYHGKKVGEAHNPQGMAKARRTRNMNLSMEIITEKVMGD 358
           ++ +KN N+AS++Y N+TT LYYHG  VGEA  P G AKARRT  MN+++++I  +V+  
Sbjct: 98  DVSVKNPNVASFRYSNTTTSLYYHGVIVGEARGPPGRAKARRTLRMNVTIDVIAARVISS 157

Query: 359 PSFFTEFGSGLLMMSSYTRLDGRVRIMKIIKKHVVVTMNCTMTANVT 499
           P F T+ GSGLL MSS++R+ G+V+I+ +IK+HVVV MNCT T N++
Sbjct: 158 PDFVTDLGSGLLTMSSFSRVPGQVKILNLIKRHVVVKMNCTTTFNIS 204


>ref|XP_002511928.1| conserved hypothetical protein [Ricinus communis]
           gi|223549108|gb|EEF50597.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 218

 Score =  153 bits (387), Expect = 1e-35
 Identities = 77/172 (44%), Positives = 120/172 (69%), Gaps = 8/172 (4%)
 Frame = +2

Query: 8   RIRCVG--GCISGSLCL-ALLITVLMLTVFRVKKPEINISRITIPHFSL-NNLPPI---- 163
           R RC+   GCI+ SL + A++I +L+ TVFRVK P I ++ + I H  L NN  P     
Sbjct: 33  RRRCIKCCGCITASLLVPAIVIVILIFTVFRVKDPTIKLNNVIITHMELINNTIPKPGTN 92

Query: 164 LKIIAEMDIKNRNIASYKYDNSTTLLYYHGKKVGEAHNPQGMAKARRTRNMNLSMEIITE 343
           + ++A++ +KN NI S+KYDN+T+ LYYHG  VGEA  P G +KARRT  +N +++++ +
Sbjct: 93  ISLVADLSVKNPNIVSFKYDNTTSALYYHGVLVGEARGPPGHSKARRTMRLNATIDLVAD 152

Query: 344 KVMGDPSFFTEFGSGLLMMSSYTRLDGRVRIMKIIKKHVVVTMNCTMTANVT 499
           K++ +P+  T+  +GLL + SYT+L G+V+I+ IIKKHV + MNC++T N++
Sbjct: 153 KLISNPNLNTDAATGLLTVDSYTKLPGKVKIL-IIKKHVTIKMNCSLTVNIS 203


>ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258567 [Vitis vinifera]
           gi|147832282|emb|CAN73280.1| hypothetical protein
           VITISV_040609 [Vitis vinifera]
           gi|297745338|emb|CBI40418.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score =  152 bits (383), Expect = 4e-35
 Identities = 76/173 (43%), Positives = 116/173 (67%), Gaps = 9/173 (5%)
 Frame = +2

Query: 8   RIRCVG--GCISGSLCL-ALLITVLMLTVFRVKKPEINISRITIPHFSLNNLPPI----- 163
           R RC+   GCI+ ++ + A ++ +L+ TVFRVK P I ++  T+    L N         
Sbjct: 33  RRRCIKCWGCIAATILIQAAVVIILVFTVFRVKDPVIKLNGFTVDKLELINGTTTPGPGV 92

Query: 164 -LKIIAEMDIKNRNIASYKYDNSTTLLYYHGKKVGEAHNPQGMAKARRTRNMNLSMEIIT 340
            + + A++ +KN N AS++Y N+TT L+Y G  +GEA  P G AKARRT  MN+++EII 
Sbjct: 93  NMSLTADVSVKNPNFASFRYKNTTTTLFYSGTVIGEARGPPGQAKARRTMKMNVTIEIIL 152

Query: 341 EKVMGDPSFFTEFGSGLLMMSSYTRLDGRVRIMKIIKKHVVVTMNCTMTANVT 499
           + +M +PS  T+  SG+L M++Y+R+ GRV+++KIIKKHVVV MNC++T N+T
Sbjct: 153 DSLMSNPSLLTDISSGILPMNTYSRVPGRVKMLKIIKKHVVVKMNCSVTVNIT 205


>ref|XP_002301379.1| predicted protein [Populus trichocarpa] gi|222843105|gb|EEE80652.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score =  136 bits (343), Expect = 2e-30
 Identities = 71/170 (41%), Positives = 114/170 (67%), Gaps = 8/170 (4%)
 Frame = +2

Query: 14  RCVGGCISGSLCLALLIT---VLMLTVFRVKKPEINISRITIPHFSLNN----LPPI-LK 169
           +CV  C+  +    +L+T   VL  TVFRVK P I ++  TI    L+N     P + + 
Sbjct: 34  KCVKCCVFVTAIFVILVTAIIVLRFTVFRVKDPVITMNSFTITKLELSNGTTPKPGVNIT 93

Query: 170 IIAEMDIKNRNIASYKYDNSTTLLYYHGKKVGEAHNPQGMAKARRTRNMNLSMEIITEKV 349
           +IA++ +KN N+AS+KY N+TT LYY  + VGEA N  G A+ARRT  MN++++II +++
Sbjct: 94  LIADVSVKNPNVASFKYSNTTTTLYYDRQIVGEARNGPGHARARRTMRMNVTVDIIPDRI 153

Query: 350 MGDPSFFTEFGSGLLMMSSYTRLDGRVRIMKIIKKHVVVTMNCTMTANVT 499
           M +P+   +  SG+L M++YTR+ GR++I+ I+K+++VV M C++T N+T
Sbjct: 154 MSNPNLNADMSSGILSMTTYTRVPGRMKIV-IVKRNIVVKMTCSITLNIT 202


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