BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011709
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis ...   209   3e-52
emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]   209   3e-52
ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [C...   193   3e-47
ref|XP_002517803.1| conserved hypothetical protein [Ricinus comm...   190   2e-46
ref|XP_002333390.1| predicted protein [Populus trichocarpa] gi|2...   184   2e-44

>ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis vinifera]
           gi|296081827|emb|CBI20832.3| unnamed protein product
           [Vitis vinifera]
          Length = 277

 Score =  209 bits (533), Expect = 3e-52
 Identities = 109/194 (56%), Positives = 135/194 (69%), Gaps = 2/194 (1%)
 Frame = -3

Query: 640 FILLPIFEEARMKKEGDQGKFRQLDEMMFINGYPGYQNLLSIAEDSMQVVCEMKEIGSSK 461
           FI+LPIFEEARMKK  D GKFRQLDE+MF+N YPGYQ+L+ IAE+ MQVVCE+KEIGSSK
Sbjct: 84  FIMLPIFEEARMKKRDDPGKFRQLDEIMFVNSYPGYQHLIPIAENCMQVVCEIKEIGSSK 143

Query: 460 FFRLNDSKVLAWLCHKVHQLKLTLPTIDKNYAAQNENDMLTEVVLLLGEYLKEEPWXXXX 281
           FFRL+DSKVLAWLC+KVHQLK  LPT+DKNYAA+++ D LT+ + +LGEYL++EPW    
Sbjct: 144 FFRLDDSKVLAWLCYKVHQLKQILPTLDKNYAARDKKDTLTDAISILGEYLEDEPWLKLL 203

Query: 280 XXXXXXXLQEATKRTPVQEFLPSTLDST--PXXXXXXXXXXXXXXXXXXXXXXXXKIETD 107
                  L +AT +  V EF P+  D++                           K+E D
Sbjct: 204 CDHLKLNLLDATMKASVIEFHPTAPDNSLGSSNQLQGKSGNERKTTRPGKQPKKAKVEKD 263

Query: 106 SRNIKDMFTRASRR 65
           SRNIKDMF+RASR+
Sbjct: 264 SRNIKDMFSRASRK 277


>emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]
          Length = 277

 Score =  209 bits (533), Expect = 3e-52
 Identities = 109/194 (56%), Positives = 135/194 (69%), Gaps = 2/194 (1%)
 Frame = -3

Query: 640 FILLPIFEEARMKKEGDQGKFRQLDEMMFINGYPGYQNLLSIAEDSMQVVCEMKEIGSSK 461
           FI+LPIFEEARMKK  D GKFRQLDE+MF+N YPGYQ+L+ IAE+ MQVVCE+KEIGSSK
Sbjct: 84  FIMLPIFEEARMKKRDDPGKFRQLDEIMFVNSYPGYQHLIPIAENCMQVVCEIKEIGSSK 143

Query: 460 FFRLNDSKVLAWLCHKVHQLKLTLPTIDKNYAAQNENDMLTEVVLLLGEYLKEEPWXXXX 281
           FFRL+DSKVLAWLC+KVHQLK  LPT+DKNYAA+++ D LT+ + +LGEYL++EPW    
Sbjct: 144 FFRLDDSKVLAWLCYKVHQLKQILPTLDKNYAARDKKDTLTDAISILGEYLEDEPWLKLL 203

Query: 280 XXXXXXXLQEATKRTPVQEFLPSTLDST--PXXXXXXXXXXXXXXXXXXXXXXXXKIETD 107
                  L +AT +  V EF P+  D++                           K+E D
Sbjct: 204 CDHLKLNLLDATMKAXVIEFHPTAPDNSLGSSNQLQGKSGNERKTTRPGKQPKKAKVEKD 263

Query: 106 SRNIKDMFTRASRR 65
           SRNIKDMF+RASR+
Sbjct: 264 SRNIKDMFSRASRK 277


>ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [Cucumis sativus]
           gi|449499524|ref|XP_004160839.1| PREDICTED: ribonuclease
           H2 subunit B-like [Cucumis sativus]
          Length = 281

 Score =  193 bits (490), Expect = 3e-47
 Identities = 103/196 (52%), Positives = 129/196 (65%), Gaps = 4/196 (2%)
 Frame = -3

Query: 640 FILLPIFEEARMKKEGDQGKFRQLDEMMFINGYPGYQNLLSIAEDSMQVVCEMKEIGSSK 461
           FI LPIFEEARMKK  D GKFRQLD++MFINGYPGY +LL +AE  MQVVCE+KE+GSS+
Sbjct: 84  FIFLPIFEEARMKKGDDLGKFRQLDDIMFINGYPGYLHLLPLAEKFMQVVCEVKEVGSSR 143

Query: 460 FFRLNDSKVLAWLCHKVHQLKLTLPTIDKNYAAQNENDMLTEVVLLLGEYLKEEPWXXXX 281
           FFRL+DSKVLAWL HKV QLK TL T+DKNYAA+ E + L + V +LGEYLK++PW    
Sbjct: 144 FFRLDDSKVLAWLYHKVCQLKRTLCTLDKNYAAREEKETLCDAVSILGEYLKDQPWLKLL 203

Query: 280 XXXXXXXLQEATKRTPVQEFLPSTL----DSTPXXXXXXXXXXXXXXXXXXXXXXXXKIE 113
                    EAT++    E  P+++    DS                          K+E
Sbjct: 204 CDHLKLNFAEATRKASDSERAPTSIENNFDSISQDKSGSRSGSGAKNTRNGKQAKKPKVE 263

Query: 112 TDSRNIKDMFTRASRR 65
           T+SRNIKDMF++A++R
Sbjct: 264 TESRNIKDMFSKAAKR 279


>ref|XP_002517803.1| conserved hypothetical protein [Ricinus communis]
           gi|223543075|gb|EEF44610.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 299

 Score =  190 bits (483), Expect = 2e-46
 Identities = 101/192 (52%), Positives = 127/192 (66%)
 Frame = -3

Query: 640 FILLPIFEEARMKKEGDQGKFRQLDEMMFINGYPGYQNLLSIAEDSMQVVCEMKEIGSSK 461
           FILLPIFEEARM+K  D GKFRQLDE++FINGYPGY+ L+ IAE+ MQVVCE+KEIGSSK
Sbjct: 107 FILLPIFEEARMRKGDDPGKFRQLDEILFINGYPGYRYLMPIAENCMQVVCEIKEIGSSK 166

Query: 460 FFRLNDSKVLAWLCHKVHQLKLTLPTIDKNYAAQNENDMLTEVVLLLGEYLKEEPWXXXX 281
           FFRLNDSKV AWL  KV QLK  + ++DKNYAAQ+E + L + +++LGEYLK+EPW    
Sbjct: 167 FFRLNDSKVFAWLLCKVSQLKQAVSSLDKNYAAQDEKNTLADAIMILGEYLKDEPWLKLL 226

Query: 280 XXXXXXXLQEATKRTPVQEFLPSTLDSTPXXXXXXXXXXXXXXXXXXXXXXXXKIETDSR 101
                  L EAT++ P  E   +  +                           K+ET+S 
Sbjct: 227 CNHLKLNLLEATRKVPDAETSLTENNPASSNLMQEKGKNDGKTKRTGKQAKKAKVETESL 286

Query: 100 NIKDMFTRASRR 65
           NI++MF+RASRR
Sbjct: 287 NIREMFSRASRR 298


>ref|XP_002333390.1| predicted protein [Populus trichocarpa] gi|222836425|gb|EEE74832.1|
           predicted protein [Populus trichocarpa]
          Length = 551

 Score =  184 bits (466), Expect = 2e-44
 Identities = 102/194 (52%), Positives = 123/194 (63%), Gaps = 2/194 (1%)
 Frame = -3

Query: 640 FILLPIFEEARMKKEGDQGKFRQLDEMMFINGYPGYQNLLSIAEDSMQVVCEMKEIGSSK 461
           FILLPIFEEARMKK  D GKFRQLDE++FIN YPGY +L+SIAE+ M VVCE+KEIGSSK
Sbjct: 357 FILLPIFEEARMKKRDDLGKFRQLDEIIFINDYPGYHHLMSIAENCMGVVCEIKEIGSSK 416

Query: 460 FFRLNDSKVLAWLCHKVHQLKLTLPTIDKNYAAQNENDMLTEVVLLLGEYLKEEPWXXXX 281
           FFRL+DSKVLAWL  KV QLK  L ++DKNYAAQ+E   L   V +LGEY+K+EPW    
Sbjct: 417 FFRLDDSKVLAWLYCKVFQLKKALCSLDKNYAAQDEKYTLAGAVSILGEYVKDEPWLMLL 476

Query: 280 XXXXXXXLQEATKRTPVQEFLPSTLDSTP--XXXXXXXXXXXXXXXXXXXXXXXXKIETD 107
                  L E T + P  E  P+  +  P                          K+ET+
Sbjct: 477 LDHLKLNLLEVTSKVPEAENFPTNAEHNPVSSSLLQEKDRSEDKTKRSGKQAKKAKVETE 536

Query: 106 SRNIKDMFTRASRR 65
           SRNI++MF RA R+
Sbjct: 537 SRNIREMFRRACRK 550