BLASTX nr result

ID: Cimicifuga21_contig00011697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011697
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519473.1| PREDICTED: ribosomal RNA assembly protein mi...   115   4e-24
ref|NP_001241422.1| uncharacterized protein LOC100816856 [Glycin...   115   4e-24
gb|AFK40254.1| unknown [Medicago truncatula]                          114   8e-24
ref|XP_003617063.1| KRR1 small subunit processome component-like...   114   8e-24
emb|CBI22501.3| unnamed protein product [Vitis vinifera]              114   8e-24

>ref|XP_003519473.1| PREDICTED: ribosomal RNA assembly protein mis3-like [Glycine max]
          Length = 389

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/66 (83%), Positives = 62/66 (93%)
 Frame = -3

Query: 199 QAIKILDDEMQCDIIKIGGLIRNKDRFVKRRQQLLGSNSSTLKAIEILTKCYVLVQGNTV 20
           QAIKILDDEMQCDIIKI G++RNK+RFVKRRQ L+G NSSTLKA+EILT CY+LVQGNTV
Sbjct: 134 QAIKILDDEMQCDIIKISGMVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTV 193

Query: 19  SAMGSF 2
           +AMGSF
Sbjct: 194 AAMGSF 199


>ref|NP_001241422.1| uncharacterized protein LOC100816856 [Glycine max]
           gi|255639399|gb|ACU19995.1| unknown [Glycine max]
          Length = 389

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/66 (83%), Positives = 62/66 (93%)
 Frame = -3

Query: 199 QAIKILDDEMQCDIIKIGGLIRNKDRFVKRRQQLLGSNSSTLKAIEILTKCYVLVQGNTV 20
           QAIKILDDEMQCDIIKI G++RNK+RFVKRRQ L+G NSSTLKA+EILT CY+LVQGNTV
Sbjct: 134 QAIKILDDEMQCDIIKISGMVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTV 193

Query: 19  SAMGSF 2
           +AMGSF
Sbjct: 194 AAMGSF 199


>gb|AFK40254.1| unknown [Medicago truncatula]
          Length = 380

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/66 (81%), Positives = 61/66 (92%)
 Frame = -3

Query: 199 QAIKILDDEMQCDIIKIGGLIRNKDRFVKRRQQLLGSNSSTLKAIEILTKCYVLVQGNTV 20
           QAIK+LDDEMQCDIIKI GL+RNK+RFVKRRQ L+G NSSTLKA+EILT CY+LVQGNTV
Sbjct: 125 QAIKVLDDEMQCDIIKISGLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTV 184

Query: 19  SAMGSF 2
           S MGS+
Sbjct: 185 SVMGSY 190


>ref|XP_003617063.1| KRR1 small subunit processome component-like protein [Medicago
           truncatula] gi|355518398|gb|AET00022.1| KRR1 small
           subunit processome component-like protein [Medicago
           truncatula]
          Length = 424

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/66 (81%), Positives = 61/66 (92%)
 Frame = -3

Query: 199 QAIKILDDEMQCDIIKIGGLIRNKDRFVKRRQQLLGSNSSTLKAIEILTKCYVLVQGNTV 20
           QAIK+LDDEMQCDIIKI GL+RNK+RFVKRRQ L+G NSSTLKA+EILT CY+LVQGNTV
Sbjct: 169 QAIKVLDDEMQCDIIKISGLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTV 228

Query: 19  SAMGSF 2
           S MGS+
Sbjct: 229 SVMGSY 234


>emb|CBI22501.3| unnamed protein product [Vitis vinifera]
          Length = 424

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/66 (83%), Positives = 62/66 (93%)
 Frame = -3

Query: 199 QAIKILDDEMQCDIIKIGGLIRNKDRFVKRRQQLLGSNSSTLKAIEILTKCYVLVQGNTV 20
           QAIKIL+DEMQCDIIKIG L+RNK+RFVKRRQ L+G NSSTLKA+EILT CY+LVQGNTV
Sbjct: 165 QAIKILNDEMQCDIIKIGSLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTV 224

Query: 19  SAMGSF 2
           +AMGSF
Sbjct: 225 AAMGSF 230


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