BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011696
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513405.1| Ribosomal RNA assembly protein mis3, putativ...   219   1e-55
ref|NP_001064737.1| Os10g0452800 [Oryza sativa Japonica Group] g...   216   2e-54
emb|CBI22501.3| unnamed protein product [Vitis vinifera]              216   2e-54
ref|XP_002271394.1| PREDICTED: ribosomal RNA assembly protein mi...   216   2e-54
gb|EEC67082.1| hypothetical protein OsI_33853 [Oryza sativa Indi...   216   2e-54

>ref|XP_002513405.1| Ribosomal RNA assembly protein mis3, putative [Ricinus communis]
           gi|223547313|gb|EEF48808.1| Ribosomal RNA assembly
           protein mis3, putative [Ricinus communis]
          Length = 377

 Score =  219 bits (559), Expect = 1e-55
 Identities = 105/126 (83%), Positives = 118/126 (93%), Gaps = 2/126 (1%)
 Frame = +3

Query: 93  MEGVV-TKKRYKGKHDKPKPWD-DESIDHWKIEKFDPSWNEGGLLEASSFSTLFPRYREK 266
           MEG + TKK++KGKHDKPKPWD D +ID WKIEKFDPSWNEGG+LE SSFSTLFP+YREK
Sbjct: 1   MEGEIETKKKHKGKHDKPKPWDEDPNIDRWKIEKFDPSWNEGGMLEVSSFSTLFPQYREK 60

Query: 267 YLQEVWPIVRGSLKQYGISCELNLVEGSMTVSTTLKTRDPYIIVKARDLIKLLSRSVPAP 446
           YLQEVWP+V+ ++K+YG++CELNLVEGSMTVSTT KTRDPYIIVKARDLIKLLSRSVPAP
Sbjct: 61  YLQEVWPMVKSAIKEYGVACELNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAP 120

Query: 447 QAIKIL 464
           QAIKIL
Sbjct: 121 QAIKIL 126


>ref|NP_001064737.1| Os10g0452800 [Oryza sativa Japonica Group]
           gi|31432429|gb|AAP54059.1| Ribosomal RNA assembly
           protein mis3, putative, expressed [Oryza sativa Japonica
           Group] gi|113639346|dbj|BAF26651.1| Os10g0452800 [Oryza
           sativa Japonica Group] gi|215687236|dbj|BAG91801.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|222612935|gb|EEE51067.1| hypothetical protein
           OsJ_31745 [Oryza sativa Japonica Group]
          Length = 395

 Score =  216 bits (550), Expect = 2e-54
 Identities = 106/135 (78%), Positives = 119/135 (88%), Gaps = 3/135 (2%)
 Frame = +3

Query: 69  EEEMENVDMEGVVTKK--RYKGKHDKPKPWDDE-SIDHWKIEKFDPSWNEGGLLEASSFS 239
           EE       E V  KK  R+KGKHDKPKPWDD+ +IDHWKIEKFDPSWNEGG+LE SSFS
Sbjct: 7   EEANAASSAEEVGRKKPPRHKGKHDKPKPWDDDPNIDHWKIEKFDPSWNEGGMLEVSSFS 66

Query: 240 TLFPRYREKYLQEVWPIVRGSLKQYGISCELNLVEGSMTVSTTLKTRDPYIIVKARDLIK 419
           TLFP+YREKYLQE WPIV+G+LK++G++CELNLVEGSMTVSTT KTRDPYIIVKA++LIK
Sbjct: 67  TLFPQYREKYLQEAWPIVKGALKEFGVACELNLVEGSMTVSTTRKTRDPYIIVKAKELIK 126

Query: 420 LLSRSVPAPQAIKIL 464
           LLSRSVPAPQAIKIL
Sbjct: 127 LLSRSVPAPQAIKIL 141


>emb|CBI22501.3| unnamed protein product [Vitis vinifera]
          Length = 424

 Score =  216 bits (550), Expect = 2e-54
 Identities = 103/133 (77%), Positives = 116/133 (87%)
 Frame = +3

Query: 66  MEEEMENVDMEGVVTKKRYKGKHDKPKPWDDESIDHWKIEKFDPSWNEGGLLEASSFSTL 245
           MEE    V++E    K ++KGKHDKPKPWDD SIDHWK++KFDPSWNEGG+LE SSFSTL
Sbjct: 39  MEESNGEVEVERK-EKTKHKGKHDKPKPWDDPSIDHWKVDKFDPSWNEGGMLEVSSFSTL 97

Query: 246 FPRYREKYLQEVWPIVRGSLKQYGISCELNLVEGSMTVSTTLKTRDPYIIVKARDLIKLL 425
           FP+YREKYLQE WP VRG+LK++G+  ELNLVEG MTVSTT KTRDPYII+KARDLIKLL
Sbjct: 98  FPQYREKYLQEAWPTVRGALKEFGVKSELNLVEGCMTVSTTRKTRDPYIIMKARDLIKLL 157

Query: 426 SRSVPAPQAIKIL 464
           SRSVPAPQAIKIL
Sbjct: 158 SRSVPAPQAIKIL 170


>ref|XP_002271394.1| PREDICTED: ribosomal RNA assembly protein mis3-like [Vitis
           vinifera]
          Length = 386

 Score =  216 bits (550), Expect = 2e-54
 Identities = 103/133 (77%), Positives = 116/133 (87%)
 Frame = +3

Query: 66  MEEEMENVDMEGVVTKKRYKGKHDKPKPWDDESIDHWKIEKFDPSWNEGGLLEASSFSTL 245
           MEE    V++E    K ++KGKHDKPKPWDD SIDHWK++KFDPSWNEGG+LE SSFSTL
Sbjct: 1   MEESNGEVEVERK-EKTKHKGKHDKPKPWDDPSIDHWKVDKFDPSWNEGGMLEVSSFSTL 59

Query: 246 FPRYREKYLQEVWPIVRGSLKQYGISCELNLVEGSMTVSTTLKTRDPYIIVKARDLIKLL 425
           FP+YREKYLQE WP VRG+LK++G+  ELNLVEG MTVSTT KTRDPYII+KARDLIKLL
Sbjct: 60  FPQYREKYLQEAWPTVRGALKEFGVKSELNLVEGCMTVSTTRKTRDPYIIMKARDLIKLL 119

Query: 426 SRSVPAPQAIKIL 464
           SRSVPAPQAIKIL
Sbjct: 120 SRSVPAPQAIKIL 132


>gb|EEC67082.1| hypothetical protein OsI_33853 [Oryza sativa Indica Group]
          Length = 395

 Score =  216 bits (550), Expect = 2e-54
 Identities = 106/135 (78%), Positives = 119/135 (88%), Gaps = 3/135 (2%)
 Frame = +3

Query: 69  EEEMENVDMEGVVTKK--RYKGKHDKPKPWDDE-SIDHWKIEKFDPSWNEGGLLEASSFS 239
           EE       E V  KK  R+KGKHDKPKPWDD+ +IDHWKIEKFDPSWNEGG+LE SSFS
Sbjct: 7   EEANAASSAEEVGRKKPPRHKGKHDKPKPWDDDPNIDHWKIEKFDPSWNEGGMLEVSSFS 66

Query: 240 TLFPRYREKYLQEVWPIVRGSLKQYGISCELNLVEGSMTVSTTLKTRDPYIIVKARDLIK 419
           TLFP+YREKYLQE WPIV+G+LK++G++CELNLVEGSMTVSTT KTRDPYIIVKA++LIK
Sbjct: 67  TLFPQYREKYLQEAWPIVKGALKEFGVACELNLVEGSMTVSTTRKTRDPYIIVKAKELIK 126

Query: 420 LLSRSVPAPQAIKIL 464
           LLSRSVPAPQAIKIL
Sbjct: 127 LLSRSVPAPQAIKIL 141