BLASTX nr result

ID: Cimicifuga21_contig00011681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011681
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002881945.1| hypothetical protein ARALYDRAFT_903808 [Arab...   198   4e-49
ref|NP_566005.1| transcription termination factor domain-contain...   198   4e-49
ref|XP_002327325.1| predicted protein [Populus trichocarpa] gi|2...   197   1e-48
emb|CBI27915.3| unnamed protein product [Vitis vinifera]              193   1e-47
ref|XP_002279655.1| PREDICTED: uncharacterized protein LOC100255...   193   1e-47

>ref|XP_002881945.1| hypothetical protein ARALYDRAFT_903808 [Arabidopsis lyrata subsp.
           lyrata] gi|297327784|gb|EFH58204.1| hypothetical protein
           ARALYDRAFT_903808 [Arabidopsis lyrata subsp. lyrata]
          Length = 508

 Score =  198 bits (503), Expect = 4e-49
 Identities = 97/109 (88%), Positives = 103/109 (94%)
 Frame = +1

Query: 1   DINEYPLMLGCSVRKNIIPVLGYLEKMGIQRSKLGEFVKNYPQVLHASVVVELVPVGRFL 180
           DINEYPLMLGCSVRKN+IPVL YLEK+GI RSKLGEFVKNYPQVLHASVVVEL PV +FL
Sbjct: 129 DINEYPLMLGCSVRKNLIPVLAYLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFL 188

Query: 181 RGLDVERQDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVCPRDIGPI 327
           RGLDVE+QD+GYVL KYPELLGFKLEGTMSTSVAYLVSIGV PRDIGP+
Sbjct: 189 RGLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPM 237


>ref|NP_566005.1| transcription termination factor domain-containing protein
           [Arabidopsis thaliana] gi|3212859|gb|AAC23410.1|
           expressed protein [Arabidopsis thaliana]
           gi|14532592|gb|AAK64024.1| unknown protein [Arabidopsis
           thaliana] gi|19310761|gb|AAL85111.1| unknown protein
           [Arabidopsis thaliana] gi|330255268|gb|AEC10362.1|
           transcription termination factor domain-containing
           protein [Arabidopsis thaliana]
          Length = 507

 Score =  198 bits (503), Expect = 4e-49
 Identities = 97/109 (88%), Positives = 103/109 (94%)
 Frame = +1

Query: 1   DINEYPLMLGCSVRKNIIPVLGYLEKMGIQRSKLGEFVKNYPQVLHASVVVELVPVGRFL 180
           DINEYPLMLGCSVRKN+IPVL YLEK+GI RSKLGEFVKNYPQVLHASVVVEL PV +FL
Sbjct: 128 DINEYPLMLGCSVRKNLIPVLAYLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFL 187

Query: 181 RGLDVERQDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVCPRDIGPI 327
           RGLDVE+QD+GYVL KYPELLGFKLEGTMSTSVAYLVSIGV PRDIGP+
Sbjct: 188 RGLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPM 236


>ref|XP_002327325.1| predicted protein [Populus trichocarpa] gi|222835695|gb|EEE74130.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score =  197 bits (500), Expect = 1e-48
 Identities = 98/109 (89%), Positives = 104/109 (95%)
 Frame = +1

Query: 1   DINEYPLMLGCSVRKNIIPVLGYLEKMGIQRSKLGEFVKNYPQVLHASVVVELVPVGRFL 180
           DINEYPLMLGCSVRKNIIPVLGYLEK+GI RSKLGEFVK+YPQVLHASVVVEL PV +FL
Sbjct: 133 DINEYPLMLGCSVRKNIIPVLGYLEKIGISRSKLGEFVKSYPQVLHASVVVELQPVIKFL 192

Query: 181 RGLDVERQDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVCPRDIGPI 327
           RGLDV++ DIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGV PRDIGP+
Sbjct: 193 RGLDVDKLDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPM 241


>emb|CBI27915.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score =  193 bits (491), Expect = 1e-47
 Identities = 95/108 (87%), Positives = 102/108 (94%)
 Frame = +1

Query: 4   INEYPLMLGCSVRKNIIPVLGYLEKMGIQRSKLGEFVKNYPQVLHASVVVELVPVGRFLR 183
           +NEYPLMLGCSVRKN+IPVLGYLEK+GI RSKLGEFV NYPQVLHASVVVEL PV +FLR
Sbjct: 104 LNEYPLMLGCSVRKNMIPVLGYLEKIGIPRSKLGEFVVNYPQVLHASVVVELAPVVKFLR 163

Query: 184 GLDVERQDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVCPRDIGPI 327
           GLDV++QDIGYVL KYPELLGFKLEGTMSTSVAYLVSIGV PRDIGP+
Sbjct: 164 GLDVDKQDIGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPM 211


>ref|XP_002279655.1| PREDICTED: uncharacterized protein LOC100255927 [Vitis vinifera]
          Length = 481

 Score =  193 bits (491), Expect = 1e-47
 Identities = 95/108 (87%), Positives = 102/108 (94%)
 Frame = +1

Query: 4   INEYPLMLGCSVRKNIIPVLGYLEKMGIQRSKLGEFVKNYPQVLHASVVVELVPVGRFLR 183
           +NEYPLMLGCSVRKN+IPVLGYLEK+GI RSKLGEFV NYPQVLHASVVVEL PV +FLR
Sbjct: 104 LNEYPLMLGCSVRKNMIPVLGYLEKIGIPRSKLGEFVVNYPQVLHASVVVELAPVVKFLR 163

Query: 184 GLDVERQDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVCPRDIGPI 327
           GLDV++QDIGYVL KYPELLGFKLEGTMSTSVAYLVSIGV PRDIGP+
Sbjct: 164 GLDVDKQDIGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPM 211


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