BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011648
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517382.1| small nuclear ribonucleoprotein f, putative ...    66   6e-09
ref|XP_002325051.1| predicted protein [Populus trichocarpa] gi|2...    66   6e-09
gb|ABK22541.1| unknown [Picea sitchensis]                              66   7e-09
ref|NP_001151866.1| small nuclear ribonucleoprotein F [Zea mays]...    65   1e-08
gb|JAA40105.1| small nuclear ribonucleoprotein polypeptide F [Pa...    65   1e-08

>ref|XP_002517382.1| small nuclear ribonucleoprotein f, putative [Ricinus communis]
           gi|223543393|gb|EEF44924.1| small nuclear
           ribonucleoprotein f, putative [Ricinus communis]
          Length = 62

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = -1

Query: 438 TEEYIDGQFTGNLGEILIRCNNVLYLRGVP 349
           TEEYIDGQFTGNLGEILIRCNNVLYLRGVP
Sbjct: 22  TEEYIDGQFTGNLGEILIRCNNVLYLRGVP 51


>ref|XP_002325051.1| predicted protein [Populus trichocarpa] gi|222866485|gb|EEF03616.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = -1

Query: 438 TEEYIDGQFTGNLGEILIRCNNVLYLRGVP 349
           TEEYIDGQFTGNLGEILIRCNNVLYLRGVP
Sbjct: 48  TEEYIDGQFTGNLGEILIRCNNVLYLRGVP 77



 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -2

Query: 659 ASVPVNPKPFLNNLTGKHVMVKLKWGMEYKG 567
           A+VPVNPKPFLNNLTGK V+VKLKWGMEYKG
Sbjct: 2   ATVPVNPKPFLNNLTGKTVIVKLKWGMEYKG 32


>gb|ABK22541.1| unknown [Picea sitchensis]
          Length = 84

 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = -1

Query: 438 TEEYIDGQFTGNLGEILIRCNNVLYLRGVP 349
           TEEYIDGQFTGNLGE+LIRCNNVLYLRGVP
Sbjct: 48  TEEYIDGQFTGNLGEVLIRCNNVLYLRGVP 77



 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -2

Query: 659 ASVPVNPKPFLNNLTGKHVMVKLKWGMEYKG 567
           A+VPVNPKPFLNNLTGK V+VKLKWGMEYKG
Sbjct: 2   ATVPVNPKPFLNNLTGKPVIVKLKWGMEYKG 32


>ref|NP_001151866.1| small nuclear ribonucleoprotein F [Zea mays]
           gi|195650409|gb|ACG44672.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|413935831|gb|AFW70382.1| small nuclear
           ribonucleoprotein F [Zea mays]
          Length = 107

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = -2

Query: 689 VQSLHSTLMAASVPVNPKPFLNNLTGKHVMVKLKWGMEYKG 567
           + SL S+    +VPVNPKPFLNNLTGK V+VKLKWGMEYKG
Sbjct: 13  IYSLISSRFVQTVPVNPKPFLNNLTGKPVIVKLKWGMEYKG 53



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 28/30 (93%), Positives = 30/30 (100%)
 Frame = -1

Query: 438 TEEYIDGQFTGNLGEILIRCNNVLYLRGVP 349
           TEEYIDGQF+GNLGEILIRCNNV+YLRGVP
Sbjct: 69  TEEYIDGQFSGNLGEILIRCNNVMYLRGVP 98


>gb|JAA40105.1| small nuclear ribonucleoprotein polypeptide F [Pan troglodytes]
          Length = 123

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -2

Query: 677 HSTLMAASVPVNPKPFLNNLTGKHVMVKLKWGMEYKG 567
           HS ++  S+P+NPKPFLN LTGK VMVKLKWGMEYKG
Sbjct: 32  HSAVVTMSLPLNPKPFLNGLTGKPVMVKLKWGMEYKG 68