BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011646
         (1141 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532875.1| conserved hypothetical protein [Ricinus comm...   344   2e-92
ref|NP_565534.1| uncharacterized protein [Arabidopsis thaliana] ...   340   5e-91
ref|XP_002880440.1| hypothetical protein ARALYDRAFT_320077 [Arab...   339   9e-91
ref|XP_002451709.1| hypothetical protein SORBIDRAFT_04g006390 [S...   337   3e-90
ref|XP_002283731.1| PREDICTED: mediator of RNA polymerase II tra...   336   6e-90

>ref|XP_002532875.1| conserved hypothetical protein [Ricinus communis]
           gi|223527360|gb|EEF29504.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 217

 Score =  344 bits (883), Expect = 2e-92
 Identities = 172/217 (79%), Positives = 190/217 (87%)
 Frame = -2

Query: 873 MECAIEGIIETQHVEALEILLQGLCGVPKERFRIHELCLKSLPNLGTVSSEVRLLCDLEQ 694
           MEC ++GIIETQHVEALEILLQGLCGV +ER RIHELCLKS PNLG V+SEVRLLCDLEQ
Sbjct: 1   MECVVQGIIETQHVEALEILLQGLCGVHRERLRIHELCLKSGPNLGIVASEVRLLCDLEQ 60

Query: 693 PTPTWTVRHVGGAMRGAGAEQLSVAVRTMIESKASKNVLRFFYTLGYKLDHELLKVGFSF 514
           P PTWTV+HVGGAMRGAGAEQ+SV VRTM+ESKASKNVLR FY LGYKLDHELL+VGF+F
Sbjct: 61  PEPTWTVKHVGGAMRGAGAEQISVLVRTMVESKASKNVLRLFYALGYKLDHELLRVGFAF 120

Query: 513 HFQKGAHLKVSVTSVNKLPKLYAIEEAIPVTPGIQLVEVTAPAAADNYHEVAAAVSSFSE 334
           HFQ+GA + V V+SVNK+ KL+A +EA+PVTPGIQLVEVTAPA  +NY EV AAVSSF E
Sbjct: 121 HFQRGARITVRVSSVNKMLKLHATDEAVPVTPGIQLVEVTAPATPENYSEVVAAVSSFCE 180

Query: 333 YLAPLLHLSKPGVSSGVVPTXXXXXASLMSDRGGKAL 223
           YLAPLLHLSKPGVS+GVVPT     ASLMSD GG  L
Sbjct: 181 YLAPLLHLSKPGVSTGVVPTAAAAAASLMSDGGGTTL 217


>ref|NP_565534.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75206349|sp|Q9SJZ6.1|MED18_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           18 gi|4544453|gb|AAD22361.1| expressed protein
           [Arabidopsis thaliana] gi|117168219|gb|ABK32192.1|
           At2g22370 [Arabidopsis thaliana]
           gi|330252204|gb|AEC07298.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 219

 Score =  340 bits (871), Expect = 5e-91
 Identities = 164/217 (75%), Positives = 191/217 (88%)
 Frame = -2

Query: 873 MECAIEGIIETQHVEALEILLQGLCGVPKERFRIHELCLKSLPNLGTVSSEVRLLCDLEQ 694
           MEC ++GIIETQHVEALEILLQGLCGV +ER R+HELCL+S PNLG VSSEVRLLCDL+Q
Sbjct: 3   MECVVQGIIETQHVEALEILLQGLCGVQRERLRVHELCLRSGPNLGVVSSEVRLLCDLDQ 62

Query: 693 PTPTWTVRHVGGAMRGAGAEQLSVAVRTMIESKASKNVLRFFYTLGYKLDHELLKVGFSF 514
           P PTWTV+HVGGAMRGAGA+Q+SV VR MIESK SKN LR FY LGYKLDHELLKVGF+F
Sbjct: 63  PEPTWTVKHVGGAMRGAGADQISVLVRNMIESKVSKNALRMFYALGYKLDHELLKVGFAF 122

Query: 513 HFQKGAHLKVSVTSVNKLPKLYAIEEAIPVTPGIQLVEVTAPAAADNYHEVAAAVSSFSE 334
           HFQ+ AH+ VSV+SVNK+PK++AI+EA+PVTPG+Q+V+VTAPA ++NY EVAAAVSSF E
Sbjct: 123 HFQRTAHISVSVSSVNKMPKVHAIDEAVPVTPGMQIVDVTAPATSENYSEVAAAVSSFCE 182

Query: 333 YLAPLLHLSKPGVSSGVVPTXXXXXASLMSDRGGKAL 223
           +LAPL+HLSKP +S+GVVPT     ASLMSD GG  L
Sbjct: 183 FLAPLVHLSKPSISTGVVPTAAAAAASLMSDGGGTTL 219


>ref|XP_002880440.1| hypothetical protein ARALYDRAFT_320077 [Arabidopsis lyrata subsp.
           lyrata] gi|297326279|gb|EFH56699.1| hypothetical protein
           ARALYDRAFT_320077 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  339 bits (869), Expect = 9e-91
 Identities = 165/217 (76%), Positives = 190/217 (87%)
 Frame = -2

Query: 873 MECAIEGIIETQHVEALEILLQGLCGVPKERFRIHELCLKSLPNLGTVSSEVRLLCDLEQ 694
           MEC ++GIIETQHVEALEILLQGLCGV +ER R+HELCLKS PNLG VSSEVRLLCDL+Q
Sbjct: 3   MECVVQGIIETQHVEALEILLQGLCGVKRERLRVHELCLKSGPNLGVVSSEVRLLCDLDQ 62

Query: 693 PTPTWTVRHVGGAMRGAGAEQLSVAVRTMIESKASKNVLRFFYTLGYKLDHELLKVGFSF 514
           P PTWTV+HVGG MRGAGA+Q+SV VRTMIESK SKN LR FY LGYKLDHELLKVGF+F
Sbjct: 63  PEPTWTVKHVGGPMRGAGADQISVMVRTMIESKVSKNALRMFYALGYKLDHELLKVGFAF 122

Query: 513 HFQKGAHLKVSVTSVNKLPKLYAIEEAIPVTPGIQLVEVTAPAAADNYHEVAAAVSSFSE 334
           HFQ+ AH+ VSV+SVNK+PK++AI+EA+PVTPG+Q+V+VTAPA  +NY EVAAAVSSF E
Sbjct: 123 HFQRTAHISVSVSSVNKMPKVHAIDEAVPVTPGMQIVDVTAPATPENYSEVAAAVSSFCE 182

Query: 333 YLAPLLHLSKPGVSSGVVPTXXXXXASLMSDRGGKAL 223
           +LAPL+HLSKP +S+GVVPT     ASLMSD GG  L
Sbjct: 183 FLAPLVHLSKPFISTGVVPTAAAAAASLMSDGGGTTL 219


>ref|XP_002451709.1| hypothetical protein SORBIDRAFT_04g006390 [Sorghum bicolor]
           gi|241931540|gb|EES04685.1| hypothetical protein
           SORBIDRAFT_04g006390 [Sorghum bicolor]
          Length = 217

 Score =  337 bits (865), Expect = 3e-90
 Identities = 163/217 (75%), Positives = 190/217 (87%)
 Frame = -2

Query: 873 MECAIEGIIETQHVEALEILLQGLCGVPKERFRIHELCLKSLPNLGTVSSEVRLLCDLEQ 694
           MEC ++GIIETQHVEALE+LLQGL GVPKER R+HELCLKS PNLG V SEVRLLCDL Q
Sbjct: 1   MECVVQGIIETQHVEALEVLLQGLSGVPKERVRVHELCLKSGPNLGVVPSEVRLLCDLAQ 60

Query: 693 PTPTWTVRHVGGAMRGAGAEQLSVAVRTMIESKASKNVLRFFYTLGYKLDHELLKVGFSF 514
           PTP+WT+RHVGGAMRGAGAEQ+SV VRT++ESKASKNVL +FYTLGYKLDHELLK+GF+F
Sbjct: 61  PTPSWTIRHVGGAMRGAGAEQISVLVRTIVESKASKNVLHYFYTLGYKLDHELLKIGFAF 120

Query: 513 HFQKGAHLKVSVTSVNKLPKLYAIEEAIPVTPGIQLVEVTAPAAADNYHEVAAAVSSFSE 334
            F +GA + V+VTS NK+P+L+A +EA+PVTPGIQLVE+TAPAAADNY++V +AVS+F E
Sbjct: 121 RFHRGAQITVTVTSTNKMPRLHATDEAVPVTPGIQLVEITAPAAADNYNDVVSAVSAFCE 180

Query: 333 YLAPLLHLSKPGVSSGVVPTXXXXXASLMSDRGGKAL 223
           YLAPLLHLSKPG S+G+V T     ASLMS  GGK L
Sbjct: 181 YLAPLLHLSKPGHSTGIVATAGAAAASLMSSGGGKTL 217


>ref|XP_002283731.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
           [Vitis vinifera] gi|302142417|emb|CBI19620.3| unnamed
           protein product [Vitis vinifera]
          Length = 216

 Score =  336 bits (862), Expect = 6e-90
 Identities = 165/213 (77%), Positives = 189/213 (88%)
 Frame = -2

Query: 873 MECAIEGIIETQHVEALEILLQGLCGVPKERFRIHELCLKSLPNLGTVSSEVRLLCDLEQ 694
           MEC ++GIIETQHVEALEILLQGLCGV +ER RIHELCLKS PNLG V+SEVR+LCDLEQ
Sbjct: 1   MECVVQGIIETQHVEALEILLQGLCGVHRERLRIHELCLKSGPNLGLVASEVRVLCDLEQ 60

Query: 693 PTPTWTVRHVGGAMRGAGAEQLSVAVRTMIESKASKNVLRFFYTLGYKLDHELLKVGFSF 514
           P PTW VRH+GGAMRG+GAEQ+SV VRTM+ESK SKNVLR FY LGY+LDHELL+VGF+F
Sbjct: 61  PEPTWIVRHIGGAMRGSGAEQISVLVRTMVESKVSKNVLRLFYALGYRLDHELLRVGFAF 120

Query: 513 HFQKGAHLKVSVTSVNKLPKLYAIEEAIPVTPGIQLVEVTAPAAADNYHEVAAAVSSFSE 334
           HFQ+GA + V+V+SVNK+ KL+A +EA+PVTPGIQLVEVTAPA+++NY EVAAAVSSF E
Sbjct: 121 HFQRGASITVTVSSVNKMLKLHATDEAVPVTPGIQLVEVTAPASSENYSEVAAAVSSFCE 180

Query: 333 YLAPLLHLSKPGVSSGVVPTXXXXXASLMSDRG 235
           YLAPLLHLSKPG S+GVVPT     ASLMSD G
Sbjct: 181 YLAPLLHLSKPGTSTGVVPTAAAAAASLMSDAG 213