BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011639
         (1081 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519056.1| rnf5, putative [Ricinus communis] gi|2235417...   207   4e-51
ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   203   7e-50
ref|XP_003543049.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   202   2e-49
ref|XP_002262822.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   202   2e-49
ref|XP_002329821.1| predicted protein [Populus trichocarpa] gi|1...   201   2e-49

>ref|XP_002519056.1| rnf5, putative [Ricinus communis] gi|223541719|gb|EEF43267.1| rnf5,
           putative [Ricinus communis]
          Length = 241

 Score =  207 bits (527), Expect = 4e-51
 Identities = 111/224 (49%), Positives = 133/224 (59%), Gaps = 13/224 (5%)
 Frame = +1

Query: 208 SAAITSLDNPGGCFDCNICLDNAHDPVVTLCGHLYCWPCIYKWLHLQGASSFAQEEKQQC 387
           ++A T  ++  GCFDCNIC D AH+PVVTLCGHLYCWPCIYKWLH+Q A S A +E  QC
Sbjct: 15  ASAATGSESFSGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSA-SIASDEHPQC 73

Query: 388 PVCKAGISLTTLVPLYGRGH--SSQNDPNKGTLQGLDIPSRPRACGVPDDLIRXXXXXXX 561
           PVCKA IS TT+VPLYGRG   +      K + +G  IP RP ACG              
Sbjct: 74  PVCKADISHTTMVPLYGRGQAPAEAEIEGKASCRGTAIPPRPSACGA-------QALISS 126

Query: 562 PRHRIHDNPYTSQSPGHQHYPNSFA-----------XXXXXXXXXXXXXMIGMFGEMVYT 708
           P+H     PY +    H + P+ ++                         +GMFGEMVY 
Sbjct: 127 PQHTAQQLPYHNPYQNHNYTPDPYSSFEEASQSPLLNLGGSAVTGFHHPFVGMFGEMVYA 186

Query: 709 RVFGNSQGASLYWYPNTYHHMRTTSPRVRRQEMQAEKSLNRISI 840
           RVFGNS   SLY Y N+YH M + SPR+RRQEMQA+KSLNRISI
Sbjct: 187 RVFGNSD--SLYAYRNSYHLMGSNSPRLRRQEMQADKSLNRISI 228


>ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Vitis vinifera]
          Length = 253

 Score =  203 bits (516), Expect = 7e-50
 Identities = 116/244 (47%), Positives = 144/244 (59%), Gaps = 9/244 (3%)
 Frame = +1

Query: 136 MATEQYFRQFEYQ-EGNGDISPSHA----SAAITSLDNPGGCFDCNICLDNAHDPVVTLC 300
           MA EQ F +   Q E +GD+S        SA+  + +N  G FDCNICLD+AHDPVVTLC
Sbjct: 1   MALEQDFPELAAQHESDGDVSLQKKWKAISASEAASENSNGSFDCNICLDSAHDPVVTLC 60

Query: 301 GHLYCWPCIYKWLHLQGASSFAQEEKQQCPVCKAGISLTTLVPLYGRGHSSQNDPNKGTL 480
           GHLYCWPCIYKWLH+Q  S    E++Q CPVCKA IS T+LVPLYGRG S      K   
Sbjct: 61  GHLYCWPCIYKWLHVQSTSP-VTEQQQNCPVCKANISHTSLVPLYGRGPSPSESETKKLH 119

Query: 481 QGLDIPSRPRACGVPD--DLIRXXXXXXXPRHRIHDNPYTSQSPGHQHYPNSF-AXXXXX 651
            G  IP RP A GV               P   +H NP+ S S   Q++P+ +       
Sbjct: 120 VGPAIPRRPPAHGVHTLITTTTSASLNSHPSRHLHPNPFQSHS---QYFPHPYGGYAATP 176

Query: 652 XXXXXXXXMIGMFGEMVYTRVFGNSQGASL-YWYPNTYHHMRTTSPRVRRQEMQAEKSLN 828
                    IGMFGEMV++R+FG+S  +   Y YPNTY  M + +PR+RRQEMQ ++ LN
Sbjct: 177 TLTSVLNPTIGMFGEMVFSRMFGSSDTSLFAYPYPNTYPLMASANPRMRRQEMQLDRCLN 236

Query: 829 RISI 840
           R+SI
Sbjct: 237 RVSI 240


>ref|XP_003543049.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
          Length = 232

 Score =  202 bits (513), Expect = 2e-49
 Identities = 107/210 (50%), Positives = 128/210 (60%), Gaps = 1/210 (0%)
 Frame = +1

Query: 214 AITSLDNPGGCFDCNICLDNAHDPVVTLCGHLYCWPCIYKWLHLQGASSFAQEEKQQCPV 393
           A+T  +NP GCFDCNICLD AH+PVVTLCGHLYCWPCIYKWLH+Q + S   +E  QCPV
Sbjct: 17  AVTEAENPNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQ-SDSLPPDEHPQCPV 75

Query: 394 CKAGISLTTLVPLYGRGHSSQNDPNKGTLQGLDIPSRPRACGVPDDLIRXXXXXXXPRHR 573
           CKA IS +T+VPLYGRGH++     K     + IP RP A      L          +H 
Sbjct: 76  CKADISNSTMVPLYGRGHAATTAEGKTASCDVFIPPRPSASCAQALLATSQRG----QHL 131

Query: 574 IHDNPYTSQ-SPGHQHYPNSFAXXXXXXXXXXXXXMIGMFGEMVYTRVFGNSQGASLYWY 750
            + NPY       H +     A             + GMFGEMVY RVFGN +  +LY Y
Sbjct: 132 PYRNPYQGHYFTSHPYQEEDDATSQMLNLGSHHHPVTGMFGEMVYARVFGNPE--NLYAY 189

Query: 751 PNTYHHMRTTSPRVRRQEMQAEKSLNRISI 840
           PN+Y  M + +PR+RRQEMQA KSLNRISI
Sbjct: 190 PNSYQLMGSATPRLRRQEMQAHKSLNRISI 219


>ref|XP_002262822.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1 isoform 1 [Vitis
           vinifera] gi|359497380|ref|XP_003635497.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1H1 isoform 2 [Vitis
           vinifera] gi|359497382|ref|XP_003635498.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1H1 isoform 3 [Vitis
           vinifera] gi|147810574|emb|CAN63097.1| hypothetical
           protein VITISV_013326 [Vitis vinifera]
          Length = 240

 Score =  202 bits (513), Expect = 2e-49
 Identities = 116/243 (47%), Positives = 139/243 (57%), Gaps = 8/243 (3%)
 Frame = +1

Query: 136 MATEQYFRQFEYQEGNGDISPSHASAAITSLDNPGGCFDCNICLDNAHDPVVTLCGHLYC 315
           MA EQYF                 SAA T  +N    F+CNIC D+A DPVVTLCGHLYC
Sbjct: 1   MAIEQYFAH----------DWRSVSAAATEAENLNDSFECNICFDSARDPVVTLCGHLYC 50

Query: 316 WPCIYKWLHLQGASSFAQEEKQQCPVCKAGISLTTLVPLYGRGHSSQNDPNKGTLQ--GL 489
           WPC+YKW H+Q A S A +E  QCPVCKA IS TTLVPLYGRG +      +G     G+
Sbjct: 51  WPCVYKWFHVQSA-SLASDEHPQCPVCKAEISHTTLVPLYGRGQTPSETELEGKTHCFGM 109

Query: 490 DIPSRPRACGVPDDLIRXXXXXXXPRHRIHDNPYTSQS------PGHQHYPNSFAXXXXX 651
            IP RP ACG    +          ++R   NPY +Q         ++H   S       
Sbjct: 110 AIPPRPPACGTQALINATSHNGQQLQYR---NPYQNQQYDPHPYNDYEHDSPSSLFNMGG 166

Query: 652 XXXXXXXXMIGMFGEMVYTRVFGNSQGASLYWYPNTYHHMRTTSPRVRRQEMQAEKSLNR 831
                    +GMFGEMVY RVFGNS+  SLY YPN+YH   +++PR+RRQEMQA+KSLNR
Sbjct: 167 STATSFFHPVGMFGEMVYARVFGNSE--SLYAYPNSYHLTGSSTPRLRRQEMQADKSLNR 224

Query: 832 ISI 840
           ISI
Sbjct: 225 ISI 227


>ref|XP_002329821.1| predicted protein [Populus trichocarpa] gi|118484396|gb|ABK94075.1|
           unknown [Populus trichocarpa]
           gi|222870883|gb|EEF08014.1| predicted protein [Populus
           trichocarpa]
          Length = 233

 Score =  201 bits (512), Expect = 2e-49
 Identities = 108/218 (49%), Positives = 127/218 (58%), Gaps = 7/218 (3%)
 Frame = +1

Query: 208 SAAITSLDNPGGCFDCNICLDNAHDPVVTLCGHLYCWPCIYKWLHLQGASSFAQEEKQQC 387
           S+A T  +NP GCFDCNIC D AH+PVVTLCGHLYCWPCIYKWLH+Q A S A +E  QC
Sbjct: 15  SSAATDSENPSGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSA-SLASDEHPQC 73

Query: 388 PVCKAGISLTTLVPLYGRGHSSQNDPNKGTLQGLDIPSRPRACGVPDDLIRXXXXXXXPR 567
           PVCKA IS TT+VPLYGRG  S     K   +G+ IP RP ACG    +           
Sbjct: 74  PVCKADISHTTMVPLYGRGQGSTEAEGKTPYRGMIIPPRPSACGAQGVVSNTSNTGQRLP 133

Query: 568 HRIHDNPYTSQSPGHQHY-------PNSFAXXXXXXXXXXXXXMIGMFGEMVYTRVFGNS 726
           +R   NPY S +     Y       P+                ++GMF EMVY RVFG  
Sbjct: 134 YR---NPYRSHNYNANPYGSFEEASPSPLLNLGDPTMTGLQQPVVGMFREMVYARVFGP- 189

Query: 727 QGASLYWYPNTYHHMRTTSPRVRRQEMQAEKSLNRISI 840
                  +PN+YH M T SPR+RR E+ A+KSLNRISI
Sbjct: 190 -------FPNSYHLMGTGSPRLRRHELMADKSLNRISI 220