BLASTX nr result

ID: Cimicifuga21_contig00011630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011630
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32591.3| unnamed protein product [Vitis vinifera]              177   1e-42
ref|XP_003631656.1| PREDICTED: 50S ribosomal protein L27-like [V...   177   1e-42
gb|AFK37660.1| unknown [Lotus japonicus]                              164   2e-38
gb|AFK36091.1| unknown [Lotus japonicus]                              164   2e-38
ref|XP_002510388.1| ribosomal protein L27, putative [Ricinus com...   163   3e-38

>emb|CBI32591.3| unnamed protein product [Vitis vinifera]
          Length = 136

 Score =  177 bits (450), Expect = 1e-42
 Identities = 90/132 (68%), Positives = 96/132 (72%)
 Frame = -3

Query: 683 KKTAGSTKNGRDSKPKFLGVKKFGGERVIPGNIIVRQRGTRFHXXXXXXXXXXXXXXXXX 504
           KKTAGSTKNGRDSKPK LGVKKFGGERVIPGNIIVRQRGTRFH                 
Sbjct: 34  KKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFH----------------- 76

Query: 503 XXXXXXXXXRFHPGNYVGIGKDHTLYALKEGNVKFERHKLSGRKWVHVEPKAGHVVHPIY 324
                       PGNYVGIGKDHTLYALKEG VKFE+HKLSGRKWVHVEPK GHV+HP+Y
Sbjct: 77  ------------PGNYVGIGKDHTLYALKEGCVKFEKHKLSGRKWVHVEPKDGHVLHPVY 124

Query: 323 SKVAPPKITTTV 288
           +  A P++ TTV
Sbjct: 125 ADAAAPRLKTTV 136


>ref|XP_003631656.1| PREDICTED: 50S ribosomal protein L27-like [Vitis vinifera]
          Length = 146

 Score =  177 bits (450), Expect = 1e-42
 Identities = 90/132 (68%), Positives = 96/132 (72%)
 Frame = -3

Query: 683 KKTAGSTKNGRDSKPKFLGVKKFGGERVIPGNIIVRQRGTRFHXXXXXXXXXXXXXXXXX 504
           KKTAGSTKNGRDSKPK LGVKKFGGERVIPGNIIVRQRGTRFH                 
Sbjct: 44  KKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFH----------------- 86

Query: 503 XXXXXXXXXRFHPGNYVGIGKDHTLYALKEGNVKFERHKLSGRKWVHVEPKAGHVVHPIY 324
                       PGNYVGIGKDHTLYALKEG VKFE+HKLSGRKWVHVEPK GHV+HP+Y
Sbjct: 87  ------------PGNYVGIGKDHTLYALKEGCVKFEKHKLSGRKWVHVEPKDGHVLHPVY 134

Query: 323 SKVAPPKITTTV 288
           +  A P++ TTV
Sbjct: 135 ADAAAPRLKTTV 146


>gb|AFK37660.1| unknown [Lotus japonicus]
          Length = 146

 Score =  164 bits (415), Expect = 2e-38
 Identities = 83/132 (62%), Positives = 92/132 (69%)
 Frame = -3

Query: 683 KKTAGSTKNGRDSKPKFLGVKKFGGERVIPGNIIVRQRGTRFHXXXXXXXXXXXXXXXXX 504
           KKTAGSTKNGRDSKPK LGVKKFGGERVIPGNIIVRQRGTRFH                 
Sbjct: 44  KKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFH----------------- 86

Query: 503 XXXXXXXXXRFHPGNYVGIGKDHTLYALKEGNVKFERHKLSGRKWVHVEPKAGHVVHPIY 324
                       PGNYVGIGKDHTL+ALK+G VKFER+KL+GRKWVHVEPK GHV+HP+Y
Sbjct: 87  ------------PGNYVGIGKDHTLFALKQGLVKFERNKLTGRKWVHVEPKEGHVLHPVY 134

Query: 323 SKVAPPKITTTV 288
              +  ++   V
Sbjct: 135 ESASESELKVAV 146


>gb|AFK36091.1| unknown [Lotus japonicus]
          Length = 181

 Score =  164 bits (415), Expect = 2e-38
 Identities = 83/132 (62%), Positives = 92/132 (69%)
 Frame = -3

Query: 683 KKTAGSTKNGRDSKPKFLGVKKFGGERVIPGNIIVRQRGTRFHXXXXXXXXXXXXXXXXX 504
           KKTAGSTKNGRDSKPK LGVKKFGGERVIPGNIIVRQRGTRFH                 
Sbjct: 79  KKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFH----------------- 121

Query: 503 XXXXXXXXXRFHPGNYVGIGKDHTLYALKEGNVKFERHKLSGRKWVHVEPKAGHVVHPIY 324
                       PGNYVGIGKDHTL+ALK+G VKFER+KL+GRKWVHVEPK GHV+HP+Y
Sbjct: 122 ------------PGNYVGIGKDHTLFALKQGLVKFERNKLTGRKWVHVEPKEGHVLHPVY 169

Query: 323 SKVAPPKITTTV 288
              +  ++   V
Sbjct: 170 ESASESELKVAV 181


>ref|XP_002510388.1| ribosomal protein L27, putative [Ricinus communis]
           gi|223551089|gb|EEF52575.1| ribosomal protein L27,
           putative [Ricinus communis]
          Length = 152

 Score =  163 bits (413), Expect = 3e-38
 Identities = 82/122 (67%), Positives = 89/122 (72%)
 Frame = -3

Query: 683 KKTAGSTKNGRDSKPKFLGVKKFGGERVIPGNIIVRQRGTRFHXXXXXXXXXXXXXXXXX 504
           K+TAGSTKNGRDSKPK LGVKKFGGERVIPGNIIVRQRGTRFH                 
Sbjct: 48  KRTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFH----------------- 90

Query: 503 XXXXXXXXXRFHPGNYVGIGKDHTLYALKEGNVKFERHKLSGRKWVHVEPKAGHVVHPIY 324
                       PGNYVG+GKDHTLYALKEGNVKFE HKLSGRKWVHVEPK G+ +HP+Y
Sbjct: 91  ------------PGNYVGMGKDHTLYALKEGNVKFETHKLSGRKWVHVEPKDGYELHPVY 138

Query: 323 SK 318
           ++
Sbjct: 139 AQ 140


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