BLASTX nr result

ID: Cimicifuga21_contig00011611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011611
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...   216   6e-54
ref|XP_004153596.1| PREDICTED: uncharacterized protein LOC101220...   175   1e-41
ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li...   166   6e-39
ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li...   164   2e-38
ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|22...   162   6e-38

>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score =  216 bits (549), Expect = 6e-54
 Identities = 120/262 (45%), Positives = 161/262 (61%)
 Frame = +1

Query: 1   PISGSTLSDLQTLFDNALDADDTEDIDRLWDELASKNLSPASLVRPMSASMESGPPHXXX 180
           PIS STLSDLQTL DNA+  +D+  IDRL+++L+S+NLS +SL+RPM+++M+S P     
Sbjct: 28  PISQSTLSDLQTLLDNAMATEDSHHIDRLFEDLSSRNLSISSLIRPMASAMDSSPTDISL 87

Query: 181 XXXXXXXXXXXXPNSPVFTLFTPIAFXXXXXXXXXXFKQKQVNSEAGGSASRGQAKDGNK 360
                        N+PVFTLFTP+AF          FK +++     G +SRG      +
Sbjct: 88  LASRVYLSLLLSLNAPVFTLFTPMAFLSLLRSIRQCFKNRKMGPPRFGESSRGSYAAAYR 147

Query: 361 KXXXXXXXXXSHRNVRXXXXXXXXXTSRFDFRLLFPILEKLESVLCRIHLDRFPDSLKSL 540
           K             VR          S FD R+LF +LE+L+ VL  IHLDRFPDSLKSL
Sbjct: 148 KRKGGGRARGVRSRVREVDDGDGSEESEFDVRMLFSVLERLQLVLGLIHLDRFPDSLKSL 207

Query: 541 VQTVAELPIAALEFYDNPGSYNRLSDLCYQILNGVLRPEHGNETDTAVEVLKSLCPSILL 720
           VQTVAE+P  ALE   N  S+++L+ LC ++L  VL  EHG++  TA EVLKSL P ILL
Sbjct: 208 VQTVAEIPAMALELCGNTASFDKLTHLCSRVLTEVLSSEHGDQATTAAEVLKSLSPLILL 267

Query: 721 SKSQARACALKFITHKMMVVAR 786
           +KS+AR  AL F+ ++MM +A+
Sbjct: 268 AKSEARTFALGFMMNRMMGMAK 289


>ref|XP_004153596.1| PREDICTED: uncharacterized protein LOC101220407, partial [Cucumis
           sativus]
          Length = 500

 Score =  175 bits (443), Expect = 1e-41
 Identities = 98/267 (36%), Positives = 153/267 (57%)
 Frame = +1

Query: 1   PISGSTLSDLQTLFDNALDADDTEDIDRLWDELASKNLSPASLVRPMSASMESGPPHXXX 180
           P+S S L DLQTL DN++  D+ + +DRL+++L++K+LSP+SL R ++++M+        
Sbjct: 29  PLSQSALFDLQTLLDNSISTDEQQPLDRLYEDLSAKSLSPSSLTRAIASAMDESSTCVSV 88

Query: 181 XXXXXXXXXXXXPNSPVFTLFTPIAFXXXXXXXXXXFKQKQVNSEAGGSASRGQAKDGNK 360
                        N+PVFTLF P+ F           KQ+    +    +++  +    K
Sbjct: 89  LASTVYLSLLLASNAPVFTLFNPMDFLSFLRCVRRFLKQRPQGQQDQDDSNKESSAPKRK 148

Query: 361 KXXXXXXXXXSHRNVRXXXXXXXXXTSRFDFRLLFPILEKLESVLCRIHLDRFPDSLKSL 540
           +           R  +             D R+L+P+LE+LE ++  IHLDRFPDSLKSL
Sbjct: 149 RTAGFKGKGLRKRPRQSSSGRYDD--GELDARVLYPVLERLEILMSVIHLDRFPDSLKSL 206

Query: 541 VQTVAELPIAALEFYDNPGSYNRLSDLCYQILNGVLRPEHGNETDTAVEVLKSLCPSILL 720
           ++TV ++P+ ALE   N   Y++ +D C +IL+ +LRPE G+ ++TAVEV+KSL P IL 
Sbjct: 207 IETVIDIPVLALEICTNLSIYSKFTDFCSRILSAMLRPEDGDLSNTAVEVIKSLSPLILN 266

Query: 721 SKSQARACALKFITHKMMVVARANAAV 801
            K QARA AL+F+T ++  VA+ +  V
Sbjct: 267 HKDQARAFALEFVTIQIGKVAKESDGV 293


>ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1334

 Score =  166 bits (420), Expect = 6e-39
 Identities = 97/254 (38%), Positives = 144/254 (56%)
 Frame = +1

Query: 1   PISGSTLSDLQTLFDNALDADDTEDIDRLWDELASKNLSPASLVRPMSASMESGPPHXXX 180
           P+S  TL++L  L  ++L        + L+DEL+SKNLSP+SL+ P++++M+S PPH   
Sbjct: 34  PLSEQTLTNLLFLLKHSLS-------ESLYDELSSKNLSPSSLIPPIASAMDSSPPHHSL 86

Query: 181 XXXXXXXXXXXXPNSPVFTLFTPIAFXXXXXXXXXXFKQKQVNSEAGGSASRGQAKDGNK 360
                       PN+PVFTLFTP++F             + +       +  G A+D ++
Sbjct: 87  LASDVFLSLLLAPNAPVFTLFTPMSFLSFL---------RSLRRSCKAHSHPGPAQDNSQ 137

Query: 361 KXXXXXXXXXSHRNVRXXXXXXXXXTSRFDFRLLFPILEKLESVLCRIHLDRFPDSLKSL 540
                       +N +         +S+ D R+L  +LEKL  V+  IHL+RFP++LKSL
Sbjct: 138 NGKRKRPGRGRAKNPQNEDDSPDT-SSQHDPRVLLRVLEKLVEVMGLIHLNRFPETLKSL 196

Query: 541 VQTVAELPIAALEFYDNPGSYNRLSDLCYQILNGVLRPEHGNETDTAVEVLKSLCPSILL 720
           +QTVAE+P+ +L    N   Y+RL  LC  +L  VL+ EHG  ++TA EVLKSLC  +L+
Sbjct: 197 IQTVAEIPVTSLNTCGNAAVYSRLLSLCSHVLKEVLKSEHGEPSNTAAEVLKSLCSLVLM 256

Query: 721 SKSQARACALKFIT 762
           +KSQAR  AL F+T
Sbjct: 257 AKSQARTFALGFVT 270


>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1324

 Score =  164 bits (416), Expect = 2e-38
 Identities = 98/254 (38%), Positives = 140/254 (55%)
 Frame = +1

Query: 1   PISGSTLSDLQTLFDNALDADDTEDIDRLWDELASKNLSPASLVRPMSASMESGPPHXXX 180
           P+S  TL DLQ L  ++L        + L+DEL SKNLSP+SL+ P++++M+S PPH   
Sbjct: 24  PLSEQTLMDLQFLLKHSLT-------ETLYDELPSKNLSPSSLIPPIASAMDSSPPHHSL 76

Query: 181 XXXXXXXXXXXXPNSPVFTLFTPIAFXXXXXXXXXXFKQKQVNSEAGGSASRGQAKDGNK 360
                       PN+PVFTLFTPI+F             + +       +  G A+D + 
Sbjct: 77  LASDVFLSLLLAPNAPVFTLFTPISFLSFL---------RSLRRSCKAHSHPGPAQDNSM 127

Query: 361 KXXXXXXXXXSHRNVRXXXXXXXXXTSRFDFRLLFPILEKLESVLCRIHLDRFPDSLKSL 540
                        N +          S+ D R+L  +LEKL  V+  IHL+RFP++LKSL
Sbjct: 128 NRKRKRPGRGRASNPQNDDDSPDTG-SQHDPRVLLRVLEKLVKVMGLIHLNRFPETLKSL 186

Query: 541 VQTVAELPIAALEFYDNPGSYNRLSDLCYQILNGVLRPEHGNETDTAVEVLKSLCPSILL 720
           +QTVAE+P+ +L+   N   Y+RL  LC  +L  VL+ EHG  ++TA EVLKSLC  +L+
Sbjct: 187 IQTVAEIPVTSLDTCGNAAVYSRLLSLCSHVLKEVLKSEHGEPSNTAAEVLKSLCSLVLM 246

Query: 721 SKSQARACALKFIT 762
           +KS AR  A+ F+T
Sbjct: 247 AKSLARTFAIGFVT 260


>ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|223544021|gb|EEF45547.1|
           condensin, putative [Ricinus communis]
          Length = 1313

 Score =  162 bits (411), Expect = 6e-38
 Identities = 104/252 (41%), Positives = 141/252 (55%)
 Frame = +1

Query: 4   ISGSTLSDLQTLFDNALDADDTEDIDRLWDELASKNLSPASLVRPMSASMESGPPHXXXX 183
           +S STL +LQ+L    LD +D + + + + +L+SK++S ASL+ P++++M+SGP H    
Sbjct: 24  LSLSTLENLQSL----LDTNDPQVLAQFFIDLSSKSISIASLLSPLTSTMDSGPTHLSLL 79

Query: 184 XXXXXXXXXXXPNSPVFTLFTPIAFXXXXXXXXXXFKQKQVNSEAGGSASRGQAKDGNKK 363
                      PNSPVFTLFTP++F           K   + S  GGS    Q K     
Sbjct: 80  SSKSYLSLLLSPNSPVFTLFTPMSFLSLLRSIRRSLKPSPLPS--GGSGGAPQIKK---- 133

Query: 364 XXXXXXXXXSHRNVRXXXXXXXXXTSRFDFRLLFPILEKLESVLCRIHLDRFPDSLKSLV 543
                      R ++         T  FD RL F +LEKL  VL  IHL+RFP+SLKSL+
Sbjct: 134 -----------RKLKKNNNKRESDTEGFDARLFFCVLEKLGLVLDSIHLNRFPESLKSLI 182

Query: 544 QTVAELPIAALEFYDNPGSYNRLSDLCYQILNGVLRPEHGNETDTAVEVLKSLCPSILLS 723
            TV E+P+ A+E      ++NRL+D C  IL  VL+ EHG E +TA EVLKSL P IL  
Sbjct: 183 HTVVEIPVLAIEM--GVVNFNRLADFCSIILRQVLKSEHGKEGETAAEVLKSLTPLILSG 240

Query: 724 KSQARACALKFI 759
           KSQAR+ AL F+
Sbjct: 241 KSQARSFALGFV 252


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