BLASTX nr result

ID: Cimicifuga21_contig00011610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011610
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275577.1| PREDICTED: putative elongation of fatty acid...   207   5e-52
ref|XP_002882473.1| GNS1/SUR4 membrane family protein [Arabidops...   204   6e-51
ref|XP_003531583.1| PREDICTED: elongation of fatty acids protein...   203   1e-50
ref|NP_187298.1| GNS1/SUR4 membrane-like protein [Arabidopsis th...   202   2e-50
ref|XP_002303157.1| predicted protein [Populus trichocarpa] gi|2...   200   1e-49

>ref|XP_002275577.1| PREDICTED: putative elongation of fatty acids protein
           DDB_G0272012-like [Vitis vinifera]
          Length = 265

 Score =  207 bits (528), Expect = 5e-52
 Identities = 94/134 (70%), Positives = 108/134 (80%)
 Frame = -2

Query: 499 TLLIILSKDTRRLSFLHVYHHAVVLVMCYLWLHTVQSLVPIALVTNCAVHTLMYAYYMMC 320
           T LIILS   +RLSFLHVYHH VVL+MCY+WLHT QSL+P+ALVTN +VH LMY YY+ C
Sbjct: 126 TFLIILSGSIKRLSFLHVYHHTVVLIMCYIWLHTSQSLMPVALVTNASVHVLMYTYYLSC 185

Query: 319 AVGKRPRWKRAVTDCQIVQFVFSFGVSAVMLWFHFCSGGCSGIWGWVFNAVFNASLLALF 140
            +G RPRWKR VTD QIVQF+FSF VS +ML++HF   GCSGIWGW FNAVFNASLL LF
Sbjct: 186 TLGWRPRWKRVVTDVQIVQFMFSFAVSGLMLYYHFSGIGCSGIWGWCFNAVFNASLLGLF 245

Query: 139 TSFHTKNYAGTKKD 98
             FH +NYA  KK+
Sbjct: 246 LDFHFRNYARRKKE 259


>ref|XP_002882473.1| GNS1/SUR4 membrane family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297328313|gb|EFH58732.1| GNS1/SUR4 membrane
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 278

 Score =  204 bits (519), Expect = 6e-51
 Identities = 93/128 (72%), Positives = 104/128 (81%)
 Frame = -2

Query: 499 TLLIILSKDTRRLSFLHVYHHAVVLVMCYLWLHTVQSLVPIALVTNCAVHTLMYAYYMMC 320
           T+LIIL K  +RLSFLHVYHHA V+VMCYLWL T QS+ P+ALVTN  VH +MY YY +C
Sbjct: 138 TILIILGKSIQRLSFLHVYHHATVVVMCYLWLRTRQSMFPVALVTNSTVHVIMYGYYFLC 197

Query: 319 AVGKRPRWKRAVTDCQIVQFVFSFGVSAVMLWFHFCSGGCSGIWGWVFNAVFNASLLALF 140
           AVG RPRWKR VTDCQIVQFVFSFG+S  ML  H    GCSGIWGW FNA FNASLLALF
Sbjct: 198 AVGSRPRWKRLVTDCQIVQFVFSFGLSGWMLREHLFGSGCSGIWGWCFNAAFNASLLALF 257

Query: 139 TSFHTKNY 116
           ++FH+KNY
Sbjct: 258 SNFHSKNY 265


>ref|XP_003531583.1| PREDICTED: elongation of fatty acids protein A-like [Glycine max]
          Length = 263

 Score =  203 bits (517), Expect = 1e-50
 Identities = 91/129 (70%), Positives = 105/129 (81%)
 Frame = -2

Query: 499 TLLIILSKDTRRLSFLHVYHHAVVLVMCYLWLHTVQSLVPIALVTNCAVHTLMYAYYMMC 320
           TL I+LS+  RRLSFLHVYHHA VL+MCYLWL T QSL P+AL+TN +VH +MY YY + 
Sbjct: 126 TLFIVLSRSFRRLSFLHVYHHATVLLMCYLWLQTSQSLFPVALLTNASVHVIMYGYYFLS 185

Query: 319 AVGKRPRWKRAVTDCQIVQFVFSFGVSAVMLWFHFCSGGCSGIWGWVFNAVFNASLLALF 140
           A+G RP WKRAVTDCQI+QFVFSF +S +ML +HF   GCSGIWGW FNAVFNASLLALF
Sbjct: 186 ALGIRPSWKRAVTDCQIIQFVFSFAISGLMLHYHFSGSGCSGIWGWCFNAVFNASLLALF 245

Query: 139 TSFHTKNYA 113
             FH K+YA
Sbjct: 246 VDFHLKSYA 254


>ref|NP_187298.1| GNS1/SUR4 membrane-like protein [Arabidopsis thaliana]
           gi|6437542|gb|AAF08569.1|AC011623_2 unknown protein
           [Arabidopsis thaliana] gi|332640878|gb|AEE74399.1|
           GNS1/SUR4 membrane-like protein [Arabidopsis thaliana]
          Length = 278

 Score =  202 bits (514), Expect = 2e-50
 Identities = 92/128 (71%), Positives = 104/128 (81%)
 Frame = -2

Query: 499 TLLIILSKDTRRLSFLHVYHHAVVLVMCYLWLHTVQSLVPIALVTNCAVHTLMYAYYMMC 320
           T+LIIL K  +RLSFLHVYHHA V+VMCYLWL T QS+ PIALVTN  VH +MY YY +C
Sbjct: 138 TILIILGKSIQRLSFLHVYHHATVVVMCYLWLRTRQSMFPIALVTNSTVHVIMYGYYFLC 197

Query: 319 AVGKRPRWKRAVTDCQIVQFVFSFGVSAVMLWFHFCSGGCSGIWGWVFNAVFNASLLALF 140
           AVG RP+WKR VTDCQIVQFVFSFG+S  ML  H    GC+GIWGW FNA FNASLLALF
Sbjct: 198 AVGSRPKWKRLVTDCQIVQFVFSFGLSGWMLREHLFGSGCTGIWGWCFNAAFNASLLALF 257

Query: 139 TSFHTKNY 116
           ++FH+KNY
Sbjct: 258 SNFHSKNY 265


>ref|XP_002303157.1| predicted protein [Populus trichocarpa] gi|222840589|gb|EEE78136.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  200 bits (508), Expect = 1e-49
 Identities = 91/129 (70%), Positives = 105/129 (81%)
 Frame = -2

Query: 499 TLLIILSKDTRRLSFLHVYHHAVVLVMCYLWLHTVQSLVPIALVTNCAVHTLMYAYYMMC 320
           TLLIILS   +RL+FLHVYHHA V+VMCYLWL T QSL P+AL+TN  VH +MY YY+  
Sbjct: 134 TLLIILSNSIQRLTFLHVYHHATVVVMCYLWLMTSQSLFPVALITNSLVHMVMYYYYLWS 193

Query: 319 AVGKRPRWKRAVTDCQIVQFVFSFGVSAVMLWFHFCSGGCSGIWGWVFNAVFNASLLALF 140
           A+G RP+WKR VTDCQIVQFVFSF +S +ML++HF   GCSGIWGW FNAVFNASLLALF
Sbjct: 194 AMGVRPKWKRLVTDCQIVQFVFSFAISGLMLYYHFTGSGCSGIWGWCFNAVFNASLLALF 253

Query: 139 TSFHTKNYA 113
             FH K+YA
Sbjct: 254 LDFHGKSYA 262


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