BLASTX nr result

ID: Cimicifuga21_contig00011601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011601
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276036.1| PREDICTED: uncharacterized protein LOC100251...   167   3e-39
ref|XP_002522105.1| conserved hypothetical protein [Ricinus comm...   164   2e-38
ref|XP_002298793.1| predicted protein [Populus trichocarpa] gi|2...   159   1e-36
ref|XP_002867158.1| hypothetical protein ARALYDRAFT_491300 [Arab...   158   2e-36
ref|NP_567935.3| uncharacterized protein [Arabidopsis thaliana] ...   157   3e-36

>ref|XP_002276036.1| PREDICTED: uncharacterized protein LOC100251465 [Vitis vinifera]
           gi|297736403|emb|CBI25126.3| unnamed protein product
           [Vitis vinifera]
          Length = 203

 Score =  167 bits (424), Expect = 3e-39
 Identities = 92/172 (53%), Positives = 118/172 (68%), Gaps = 7/172 (4%)
 Frame = -1

Query: 877 RLQTFSTTRRIFRYSQVSSFRRDAGGGVVSDIRNWSRTS---IGDFG--YXXXXXXXXXX 713
           R  +FS   R+    ++S F ++ G  +V D RNW+R      G++G             
Sbjct: 33  RFHSFSNLPRLRSSRRISHFSQE-GDHLVDDPRNWTRNRSVVAGEYGDDEDEDDEDDEEE 91

Query: 712 XXXXXXXLVRFVENVFRKISKRARKAVRSVLPLSISTQLVGFSVNGVIILAFLWVLKAFL 533
                  LVRFV+NVF+KISKR RKAVRSVLP+ IST+LVGFSV+GV++L FLWVLKAFL
Sbjct: 92  EDRSLDLLVRFVQNVFKKISKRTRKAVRSVLPVPISTKLVGFSVDGVLMLTFLWVLKAFL 151

Query: 532 EVVCTFGSLVFVSILLIRGIWSGISYLQESRNHIANDFDDS--AWTGAQPTS 383
           EV+CT GS+VFVSIL+IRGIW+G+SY+QE+RNH  N+  D   AWTG QPT+
Sbjct: 152 EVICTLGSVVFVSILVIRGIWTGVSYVQENRNHTGNELGDDHRAWTGTQPTT 203


>ref|XP_002522105.1| conserved hypothetical protein [Ricinus communis]
           gi|223538704|gb|EEF40305.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 200

 Score =  164 bits (416), Expect = 2e-38
 Identities = 92/167 (55%), Positives = 112/167 (67%), Gaps = 6/167 (3%)
 Frame = -1

Query: 865 FSTTRRIFRYSQVSSFRRDAGGGVVSDIRNWSRT----SIGDFGYXXXXXXXXXXXXXXX 698
           F +++   R S+ S         +++D RNW R+     + D G                
Sbjct: 34  FFSSKSPLRASRRSISNTTNTSNLINDPRNWGRSINTSELFDDGNDDDEEEEEEEEDRSL 93

Query: 697 XXLVRFVENVFRKISKRARKAVRSVLPLSISTQLVGFSVNGVIILAFLWVLKAFLEVVCT 518
              VRF++NVF+K+SKRARKA RSVLPLSIST+LVGFSVNGV+ILAFLWVLKAFLEVVCT
Sbjct: 94  DLFVRFIQNVFKKVSKRARKAARSVLPLSISTKLVGFSVNGVLILAFLWVLKAFLEVVCT 153

Query: 517 FGSLVFVSILLIRGIWSGISYLQESRNHIANDFDDS--AWTGAQPTS 383
            GS+VFVSILLIRGIWSGI+YLQESR    N+ +D    WTGAQP +
Sbjct: 154 LGSVVFVSILLIRGIWSGITYLQESRYLELNEVEDEHHEWTGAQPAT 200


>ref|XP_002298793.1| predicted protein [Populus trichocarpa] gi|222846051|gb|EEE83598.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  159 bits (402), Expect = 1e-36
 Identities = 86/138 (62%), Positives = 99/138 (71%), Gaps = 5/138 (3%)
 Frame = -1

Query: 781 RNWSRTSIGDFG---YXXXXXXXXXXXXXXXXXLVRFVENVFRKISKRARKAVRSVLPLS 611
           RNWSR+   DF                      LVRF+ NVF+K+SKRARKAVRSVLP+ 
Sbjct: 4   RNWSRSINSDFADDHEDGGDDDEAEEEDRSLDLLVRFISNVFKKVSKRARKAVRSVLPVP 63

Query: 610 ISTQLVGFSVNGVIILAFLWVLKAFLEVVCTFGSLVFVSILLIRGIWSGISYLQESRNHI 431
           IST+LV FSVNGV++LAFLWVLKAFLEVVCT GS+VFVSILLIRGIWSG++YLQE RN  
Sbjct: 64  ISTKLVEFSVNGVLLLAFLWVLKAFLEVVCTLGSMVFVSILLIRGIWSGVTYLQERRNLR 123

Query: 430 ANDFDDS--AWTGAQPTS 383
            N+ DD   AWTG QP +
Sbjct: 124 INELDDDHRAWTGTQPAA 141


>ref|XP_002867158.1| hypothetical protein ARALYDRAFT_491300 [Arabidopsis lyrata subsp.
           lyrata] gi|297312994|gb|EFH43417.1| hypothetical protein
           ARALYDRAFT_491300 [Arabidopsis lyrata subsp. lyrata]
          Length = 208

 Score =  158 bits (400), Expect = 2e-36
 Identities = 90/180 (50%), Positives = 113/180 (62%), Gaps = 19/180 (10%)
 Frame = -1

Query: 865 FSTTRRIFRYSQVSSF---------RRDAGGG---VVSDIRNWSRTSIGDFGYXXXXXXX 722
           FS    IF  +++S F          RD   G      D R+W+R    ++G+       
Sbjct: 29  FSPKTLIFTRTRISDFPYPLLASRRSRDFINGRDDFADDTRSWNRKIKPEYGFDEDYDGE 88

Query: 721 XXXXXXXXXXL-----VRFVENVFRKISKRARKAVRSVLPLSISTQLVGFSVNGVIILAF 557
                           +RFVENVFRKISKRARKAVRS+LP+SIST+LVGFSVNGV+ILAF
Sbjct: 89  EDEDDHEEEDRSLDLLLRFVENVFRKISKRARKAVRSILPVSISTKLVGFSVNGVLILAF 148

Query: 556 LWVLKAFLEVVCTFGSLVFVSILLIRGIWSGISYLQESRNHIANDF--DDSAWTGAQPTS 383
           LW+LKAFLEV CT G++VF SILLIRG+W+G++Y+QESRN+  N+   D  AW G QP S
Sbjct: 149 LWILKAFLEVACTLGTIVFTSILLIRGLWAGVAYMQESRNNRINELADDPRAWNGVQPVS 208


>ref|NP_567935.3| uncharacterized protein [Arabidopsis thaliana]
           gi|21554762|gb|AAM63683.1| unknown [Arabidopsis
           thaliana] gi|25054911|gb|AAN71935.1| unknown protein
           [Arabidopsis thaliana] gi|332660877|gb|AEE86277.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 203

 Score =  157 bits (398), Expect = 3e-36
 Identities = 89/170 (52%), Positives = 112/170 (65%), Gaps = 11/170 (6%)
 Frame = -1

Query: 859 TTRRIFRYSQVSSFR-RDAGGG---VVSDIRNWSRTSIGDFGYXXXXXXXXXXXXXXXXX 692
           T  RI  +  ++S R RD   G      D R+W+R    ++G+                 
Sbjct: 34  TRTRISGFPYLASRRSRDFINGRDDFADDTRSWNRKIKPEYGFDEDYDGEEDDDDHEEED 93

Query: 691 L-----VRFVENVFRKISKRARKAVRSVLPLSISTQLVGFSVNGVIILAFLWVLKAFLEV 527
                 +RFVENVFRKISKRARKAVRS+LP+SIST+LVGFSVNGV+ILAFLW+LKAFLEV
Sbjct: 94  RSLDLLLRFVENVFRKISKRARKAVRSILPVSISTKLVGFSVNGVLILAFLWILKAFLEV 153

Query: 526 VCTFGSLVFVSILLIRGIWSGISYLQESRNHIANDF--DDSAWTGAQPTS 383
            CT G++VF SILLIRG+W+G++Y+QESRN+  N+   D  AW G QP S
Sbjct: 154 ACTLGTIVFTSILLIRGLWAGVAYMQESRNNRINELADDPRAWNGMQPVS 203


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