BLASTX nr result

ID: Cimicifuga21_contig00011568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011568
         (1051 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310840.1| predicted protein [Populus trichocarpa] gi|2...   402   e-110
ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil dom...   397   e-108
ref|XP_004164664.1| PREDICTED: transmembrane and coiled-coil dom...   391   e-106
ref|XP_004146487.1| PREDICTED: transmembrane and coiled-coil dom...   391   e-106
ref|XP_002533809.1| conserved hypothetical protein [Ricinus comm...   390   e-106

>ref|XP_002310840.1| predicted protein [Populus trichocarpa] gi|222853743|gb|EEE91290.1|
            predicted protein [Populus trichocarpa]
          Length = 681

 Score =  402 bits (1033), Expect = e-110
 Identities = 201/259 (77%), Positives = 222/259 (85%)
 Frame = +2

Query: 2    GENHNQGRLAVGIMVSGLVFEEQDFLRPWEGQNDNLERYALQWESKNLIAVSTAIQDWLT 181
            G+NHNQGRLAVGIMVSG VF+E+DF++PWEGQNDNLERYAL WE KNLIAVSTAIQDWLT
Sbjct: 416  GDNHNQGRLAVGIMVSGCVFDEEDFIKPWEGQNDNLERYALHWEPKNLIAVSTAIQDWLT 475

Query: 182  SRVAMELMRHGAMMTVLGXXXXXXXXXXXXXXXXDFIDSKWTIAVDRSDKAGKILAEVLS 361
            SR+AME MR GAM+TVL                 DFIDSKWTIA+DRSDKAGK+LAEVL 
Sbjct: 476  SRIAMEFMRQGAMLTVLSTLLVALAWPATLLAATDFIDSKWTIAIDRSDKAGKLLAEVLL 535

Query: 362  KGLQGNRPVTLVGFSLGARVIFKCLQCLAQMEDNGACIVERVVLLGAPISITDESWGTAR 541
            KGLQGNRPVTLVG+SLGARVIFKCL+ LA+ E + A +VERVVLLGAPISI D+ W  AR
Sbjct: 536  KGLQGNRPVTLVGYSLGARVIFKCLETLAETE-HSAEVVERVVLLGAPISIKDQKWEAAR 594

Query: 542  KMVAGRFVNAYATSDWTLGVAFRASLLTKGLAGIQPVDVPGIENVDVTGLIEGHSSYLWT 721
            KMVAGRFVNAY+T DWTLGVAFRASLLT+GLAGIQPVDVPGIENVDVT L++GHSSYLW 
Sbjct: 595  KMVAGRFVNAYSTGDWTLGVAFRASLLTQGLAGIQPVDVPGIENVDVTDLVDGHSSYLWA 654

Query: 722  TKQILELLELDAYYPVFKS 778
            T+QILE LELDAYY VF+S
Sbjct: 655  TQQILEQLELDAYYHVFRS 673


>ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil domain-containing protein 4
            [Vitis vinifera] gi|297735050|emb|CBI17412.3| unnamed
            protein product [Vitis vinifera]
          Length = 662

 Score =  397 bits (1020), Expect = e-108
 Identities = 199/266 (74%), Positives = 223/266 (83%)
 Frame = +2

Query: 2    GENHNQGRLAVGIMVSGLVFEEQDFLRPWEGQNDNLERYALQWESKNLIAVSTAIQDWLT 181
            GENHNQGRLAV I+VSG VF+E+DF+ PWEGQN+NLERYALQWESKNLIAVSTAIQDWLT
Sbjct: 398  GENHNQGRLAVEILVSGFVFQEEDFISPWEGQNNNLERYALQWESKNLIAVSTAIQDWLT 457

Query: 182  SRVAMELMRHGAMMTVLGXXXXXXXXXXXXXXXXDFIDSKWTIAVDRSDKAGKILAEVLS 361
            S +A+ +M+ GAM+TVL                 DFIDSKWTIA+DRSDKAGK+LAEVL 
Sbjct: 458  SSIALSMMKQGAMLTVLSTLMTALAWPATLLAATDFIDSKWTIALDRSDKAGKLLAEVLQ 517

Query: 362  KGLQGNRPVTLVGFSLGARVIFKCLQCLAQMEDNGACIVERVVLLGAPISITDESWGTAR 541
            KGLQGNRPVTLVG+SLGARVIFKCLQ LA+ E N A +VERVVLLGAPIS  DE+W  AR
Sbjct: 518  KGLQGNRPVTLVGYSLGARVIFKCLQYLAETEQN-AELVERVVLLGAPISFRDENWEVAR 576

Query: 542  KMVAGRFVNAYATSDWTLGVAFRASLLTKGLAGIQPVDVPGIENVDVTGLIEGHSSYLWT 721
            KMVAGRFVNA++T+DWTLGVAFRA+LLTKGLAGIQPVDVPGIENVDVT LIEGHSSYLW 
Sbjct: 577  KMVAGRFVNAFSTNDWTLGVAFRANLLTKGLAGIQPVDVPGIENVDVTELIEGHSSYLWV 636

Query: 722  TKQILELLELDAYYPVFKSFPAMPQE 799
            T+ IL+ LELD YYPVF+  P   Q+
Sbjct: 637  TEDILDRLELDTYYPVFRGSPTEHQK 662


>ref|XP_004164664.1| PREDICTED: transmembrane and coiled-coil domain-containing protein
            4-like [Cucumis sativus]
          Length = 673

 Score =  391 bits (1005), Expect = e-106
 Identities = 195/259 (75%), Positives = 220/259 (84%)
 Frame = +2

Query: 2    GENHNQGRLAVGIMVSGLVFEEQDFLRPWEGQNDNLERYALQWESKNLIAVSTAIQDWLT 181
            GENHNQGRLAV I VSG  F+++DF+RPWEG  DNLERYALQWESKN+IAVSTAIQDWLT
Sbjct: 411  GENHNQGRLAVEITVSGFAFDDKDFVRPWEGLTDNLERYALQWESKNIIAVSTAIQDWLT 470

Query: 182  SRVAMELMRHGAMMTVLGXXXXXXXXXXXXXXXXDFIDSKWTIAVDRSDKAGKILAEVLS 361
            SR+AMELM+ GAMMTVL                 DFIDSKWTIAVDRSDKAG+ILA+VL 
Sbjct: 471  SRLAMELMKRGAMMTVLSSLLVALAWPATLLAATDFIDSKWTIAVDRSDKAGRILADVLL 530

Query: 362  KGLQGNRPVTLVGFSLGARVIFKCLQCLAQMEDNGACIVERVVLLGAPISITDESWGTAR 541
            KGLQGNRPVTLVG+SLGARVIFKCLQ LA+ E N A +VE+VVLLGAPISI D++W  AR
Sbjct: 531  KGLQGNRPVTLVGYSLGARVIFKCLQYLAETEKN-AELVEKVVLLGAPISIKDQNWEAAR 589

Query: 542  KMVAGRFVNAYATSDWTLGVAFRASLLTKGLAGIQPVDVPGIENVDVTGLIEGHSSYLWT 721
            KMVAGRFVN Y+T+DW LG+AFRASLLT+GLAGIQP+D+PGIENVDVT +IEGHSSYLW 
Sbjct: 590  KMVAGRFVNVYSTNDWMLGIAFRASLLTQGLAGIQPIDIPGIENVDVTDVIEGHSSYLWA 649

Query: 722  TKQILELLELDAYYPVFKS 778
            T+QILE LEL+ YYPVF+S
Sbjct: 650  TRQILEQLELETYYPVFRS 668


>ref|XP_004146487.1| PREDICTED: transmembrane and coiled-coil domain-containing protein
            4-like [Cucumis sativus]
          Length = 673

 Score =  391 bits (1005), Expect = e-106
 Identities = 195/259 (75%), Positives = 220/259 (84%)
 Frame = +2

Query: 2    GENHNQGRLAVGIMVSGLVFEEQDFLRPWEGQNDNLERYALQWESKNLIAVSTAIQDWLT 181
            GENHNQGRLAV I VSG  F+++DF+RPWEG  DNLERYALQWESKN+IAVSTAIQDWLT
Sbjct: 411  GENHNQGRLAVEITVSGFAFDDKDFVRPWEGLTDNLERYALQWESKNIIAVSTAIQDWLT 470

Query: 182  SRVAMELMRHGAMMTVLGXXXXXXXXXXXXXXXXDFIDSKWTIAVDRSDKAGKILAEVLS 361
            SR+AMELM+ GAMMTVL                 DFIDSKWTIAVDRSDKAG+ILA+VL 
Sbjct: 471  SRLAMELMKRGAMMTVLSSLLVALAWPATLLAATDFIDSKWTIAVDRSDKAGRILADVLL 530

Query: 362  KGLQGNRPVTLVGFSLGARVIFKCLQCLAQMEDNGACIVERVVLLGAPISITDESWGTAR 541
            KGLQGNRPVTLVG+SLGARVIFKCLQ LA+ E N A +VE+VVLLGAPISI D++W  AR
Sbjct: 531  KGLQGNRPVTLVGYSLGARVIFKCLQYLAETEKN-AELVEKVVLLGAPISIKDQNWEAAR 589

Query: 542  KMVAGRFVNAYATSDWTLGVAFRASLLTKGLAGIQPVDVPGIENVDVTGLIEGHSSYLWT 721
            KMVAGRFVN Y+T+DW LG+AFRASLLT+GLAGIQP+D+PGIENVDVT +IEGHSSYLW 
Sbjct: 590  KMVAGRFVNVYSTNDWMLGIAFRASLLTQGLAGIQPIDIPGIENVDVTDVIEGHSSYLWA 649

Query: 722  TKQILELLELDAYYPVFKS 778
            T+QILE LEL+ YYPVF+S
Sbjct: 650  TRQILEQLELETYYPVFRS 668


>ref|XP_002533809.1| conserved hypothetical protein [Ricinus communis]
            gi|223526263|gb|EEF28578.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 713

 Score =  390 bits (1001), Expect = e-106
 Identities = 192/259 (74%), Positives = 221/259 (85%)
 Frame = +2

Query: 2    GENHNQGRLAVGIMVSGLVFEEQDFLRPWEGQNDNLERYALQWESKNLIAVSTAIQDWLT 181
            GENHNQGRLAV I+VSG VF+E+DF+RPWEGQ DNLERY LQWESKNLIAVSTAIQDWLT
Sbjct: 451  GENHNQGRLAVEILVSGFVFDEEDFIRPWEGQIDNLERYVLQWESKNLIAVSTAIQDWLT 510

Query: 182  SRVAMELMRHGAMMTVLGXXXXXXXXXXXXXXXXDFIDSKWTIAVDRSDKAGKILAEVLS 361
            S +A+ LM+ GAMMTVL                 DFIDS+W++A+DRSDKAGK+LAEVL 
Sbjct: 511  SSIALGLMKQGAMMTVLSTLLAALAWPATLLAATDFIDSRWSVAIDRSDKAGKLLAEVLL 570

Query: 362  KGLQGNRPVTLVGFSLGARVIFKCLQCLAQMEDNGACIVERVVLLGAPISITDESWGTAR 541
            KGLQGNRPVTLVG+SLGARVIFKCL+ LA+ E N A +VERVVLLGAPISI +E W  AR
Sbjct: 571  KGLQGNRPVTLVGYSLGARVIFKCLETLAETERN-AEVVERVVLLGAPISIKNEKWAAAR 629

Query: 542  KMVAGRFVNAYATSDWTLGVAFRASLLTKGLAGIQPVDVPGIENVDVTGLIEGHSSYLWT 721
            K+VAGRFVNAY+T+DW LGVAFRASLLT+GLAGIQP+DVPGIEN+DVT +IEGHSSYLW 
Sbjct: 630  KVVAGRFVNAYSTNDWILGVAFRASLLTQGLAGIQPIDVPGIENIDVTDIIEGHSSYLWA 689

Query: 722  TKQILELLELDAYYPVFKS 778
            T+++L+ LELDAYYPVF+S
Sbjct: 690  TQKVLDKLELDAYYPVFRS 708


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