BLASTX nr result
ID: Cimicifuga21_contig00011567
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00011567
(2406 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002534037.1| Pre-rRNA-processing protein ESF1, putative [... 438 e-120
ref|XP_004155170.1| PREDICTED: pre-rRNA-processing protein esf1-... 423 e-115
ref|XP_004134297.1| PREDICTED: pre-rRNA-processing protein esf1-... 423 e-115
ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-... 377 e-102
emb|CBI25839.3| unnamed protein product [Vitis vinifera] 376 e-101
>ref|XP_002534037.1| Pre-rRNA-processing protein ESF1, putative [Ricinus communis]
gi|223525944|gb|EEF28341.1| Pre-rRNA-processing protein
ESF1, putative [Ricinus communis]
Length = 722
Score = 438 bits (1127), Expect = e-120
Identities = 254/512 (49%), Positives = 312/512 (60%), Gaps = 12/512 (2%)
Frame = -1
Query: 1698 THRLAIVNMDWSQLRAVDLYVMMNSFLPKGGQILSVSVYPSEFGLKRMEEEAVKGPVGLF 1519
THRLA+VN+DW +RAVDLYV++ SFLPKGG ILSV+VYPSEFGL+RMEEE + GPVGLF
Sbjct: 188 THRLAVVNLDWRHVRAVDLYVVLRSFLPKGGDILSVAVYPSEFGLQRMEEEELHGPVGLF 247
Query: 1518 DSDK----ETSDAEDNDEIDNEKLRAYEKSRLSYYYAVVECDSSATADYIYKTCDGMELE 1351
D +K E D +++DEID EKLRAYEKSRL YYYAVVECDS ATA+++YK CDG+E E
Sbjct: 248 DDEKKKNDEDEDEDEDDEIDEEKLRAYEKSRLRYYYAVVECDSVATAEHLYKACDGVEFE 307
Query: 1350 RTSNVLDLRFIPDSRQFEHPPRDVATEAPTKYEGLDFQTQALQQSKIHLSWDEDEPQRAK 1171
R+SNV DLRF+PDS +F+HPPRD+A EAPT YEGLDF T+ALQ S I +SWDEDEPQR K
Sbjct: 308 RSSNVFDLRFVPDSMEFKHPPRDIAKEAPTSYEGLDFHTKALQHSNIPISWDEDEPQRVK 367
Query: 1170 TLGRKLNADQLAELEWKEFLAXXXXXXXXXXXXXXXXXSA-RTLDKADKLRALLQAXXXX 994
TL RK ADQLAE+E +EFLA A R K DK RAL+Q+
Sbjct: 368 TLKRKFTADQLAEMELQEFLASDGSESDDDGNDDNAEGEADRKEKKRDKYRALIQSGDGS 427
Query: 993 XXXXXXXXXDMEVTFNTGLEDISKRILESKKDKKSETVWDAYLXXXXXXXXXXXXXXXXX 814
+ME+TFNTGLE +SKRILE K+DKKSETVW+A+L
Sbjct: 428 DGEDEEEGQEMEITFNTGLEGLSKRILE-KRDKKSETVWEAHLRKQQEKKKARKKRSKYS 486
Query: 813 XXXXXXXXXXEAPEQPDDFFVEEASVKNSK---LGKGSCXXXXXXXXXXXXXXXXXXXXX 643
E E+ +DFFVEE S+K K KG+
Sbjct: 487 SEDESSDADEEMIEEANDFFVEEPSIKKGKKDAQAKGNKEEKQLLDTDKEAEASKAELEL 546
Query: 642 XXXXXXEV-NHXXXXXXXXXXXXXXXXXXLPAEDKLPSVVDFQDPRFSALFTSPLFALDP 466
E+ N +P E+KLP+ VD+ DPRFSALF SPLFALDP
Sbjct: 547 LLADDNEIDNGIKGYNLKRKKAKGKRGKEVPDENKLPT-VDYDDPRFSALFNSPLFALDP 605
Query: 465 TDPQYKRSATYARQLAQRQQKGLGEEITNXXXXXXXXXXXXXXPDDTISKRSEQVHSETK 286
TDPQ+KRSA YARQ+AQRQ KG +E+ D+ + ++E + S+
Sbjct: 606 TDPQFKRSAAYARQMAQRQHKGDRQELAE-GEHKKQPAKSQLLSDEPDANKNEHLTSDAA 664
Query: 285 SSNP---ELSSMIRSLKRKSQQYQAPCNVKAR 199
SS ELS+++RS+K KS+Q Q P N K +
Sbjct: 665 SSKKEKHELSALVRSIKMKSKQVQLPSNGKTK 696
Score = 109 bits (272), Expect = 4e-21
Identities = 51/76 (67%), Positives = 62/76 (81%)
Frame = -1
Query: 2223 GRKIITDARFSSIHSDPRFQKVPKHQSKVSIDSRFNRMFTDKKFSSSSSRIDKRGKPNNQ 2044
GR+++ D RF+SIH+DPRFQKVPK ++KV IDSRF+RMFTDK F SSS+ +D RGK Q
Sbjct: 38 GRELMEDPRFASIHTDPRFQKVPKQRTKVEIDSRFSRMFTDKSFGSSSAPLDSRGKAKKQ 97
Query: 2043 NSANPLRHYYKIEEEE 1996
NS + LRHYY IEEEE
Sbjct: 98 NSESFLRHYYHIEEEE 113
>ref|XP_004155170.1| PREDICTED: pre-rRNA-processing protein esf1-like [Cucumis sativus]
Length = 735
Score = 423 bits (1087), Expect = e-115
Identities = 253/502 (50%), Positives = 300/502 (59%), Gaps = 8/502 (1%)
Frame = -1
Query: 1698 THRLAIVNMDWSQLRAVDLYVMMNSFLPKGGQILSVSVYPSEFGLKRMEEEAVKGPVGLF 1519
THRLA+VN+DW ++AVDLYV+++SFLPKGGQILSV+VYPSEFGL+RM+EE + GPVGLF
Sbjct: 206 THRLAVVNLDWRHVKAVDLYVVLSSFLPKGGQILSVAVYPSEFGLQRMKEEELHGPVGLF 265
Query: 1518 DSDKETSDAEDND-----EIDNEKLRAYEKSRLSYYYAVVECDSSATADYIYKTCDGMEL 1354
D +++ +D +D+D E+DNEKLRAYE SRL YYYAVVECDS ATADY+YKTCDG+E
Sbjct: 266 DGEQKKNDEDDDDDNDDEEMDNEKLRAYEMSRLRYYYAVVECDSIATADYLYKTCDGVEF 325
Query: 1353 ERTSNVLDLRFIPDSRQFEHPPRDVATEAPTKYEGLDFQTQALQQSKIHLSWDEDEPQRA 1174
ER+SN+LDLRFIPDS +FEHPPRD ATEAP+ YE L+F T ALQ SKIHLSWDEDEPQR
Sbjct: 326 ERSSNILDLRFIPDSMKFEHPPRDTATEAPSSYEVLNFHTPALQHSKIHLSWDEDEPQRV 385
Query: 1173 KTLGRKLNADQLAELEWKEFLAXXXXXXXXXXXXXXXXXSARTLDKADKLRALLQAXXXX 994
K L RK NADQLA+LE KEFLA + K DK RALLQ+
Sbjct: 386 KALKRKFNADQLADLELKEFLASDESESDDESDDGEDQVDKKR-KKGDKYRALLQS---D 441
Query: 993 XXXXXXXXXDMEVTFNTGLEDISKRILESKKDKKSETVWDAYLXXXXXXXXXXXXXXXXX 814
DMEVTFNTGLEDISKRILE KKDKKSET+W+A+L
Sbjct: 442 EDGEQDGGQDMEVTFNTGLEDISKRILE-KKDKKSETLWEAHLRKKHEKRMASRNKSANS 500
Query: 813 XXXXXXXXXXEAPEQPDDFFVEEASVKNSKLGKGSCXXXXXXXXXXXXXXXXXXXXXXXX 634
E E+ DDFFVEE VK S GK
Sbjct: 501 SDDESSDTDREV-EEVDDFFVEEPPVKES--GKDRTKNIKGREHVGEDGAAEASRAELEL 557
Query: 633 XXXEVNHXXXXXXXXXXXXXXXXXXLPAEDKLPSVVDFQDPRFSALFTSPLFALDPTDPQ 454
+ + + VD+ DPRFSALF SPLFALDPTDPQ
Sbjct: 558 LLADDDGVDTSIKGYNLKHKKKKGKEDITEDKIPTVDYNDPRFSALFNSPLFALDPTDPQ 617
Query: 453 YKRSATYARQLAQRQQKGLGEEITNXXXXXXXXXXXXXXPDDTISKRSEQVHSETKSSNP 274
+KRSA Y RQ+A +Q KG G + T +D SK V +E SS
Sbjct: 618 FKRSAAYVRQVALKQPKGDGYQPTKSRHGKSSTKQPAAPGEDE-SKGDVSVKTEGDSSKK 676
Query: 273 ---ELSSMIRSLKRKSQQYQAP 217
ELSS+++S+K KS+Q Q P
Sbjct: 677 EKYELSSLVKSIKMKSKQLQLP 698
Score = 111 bits (277), Expect = 1e-21
Identities = 51/74 (68%), Positives = 62/74 (83%)
Frame = -1
Query: 2220 RKIITDARFSSIHSDPRFQKVPKHQSKVSIDSRFNRMFTDKKFSSSSSRIDKRGKPNNQN 2041
+KIITDARFSS+HSDPRFQ PKH++KV IDSRFN+MF DK+FSS+S+ +DKRG+
Sbjct: 38 KKIITDARFSSVHSDPRFQNAPKHKAKVVIDSRFNQMFKDKRFSSTSTALDKRGRVKKGK 97
Query: 2040 SANPLRHYYKIEEE 1999
S NPLR YYKIEE+
Sbjct: 98 SENPLRRYYKIEEK 111
>ref|XP_004134297.1| PREDICTED: pre-rRNA-processing protein esf1-like [Cucumis sativus]
Length = 740
Score = 423 bits (1087), Expect = e-115
Identities = 253/502 (50%), Positives = 300/502 (59%), Gaps = 8/502 (1%)
Frame = -1
Query: 1698 THRLAIVNMDWSQLRAVDLYVMMNSFLPKGGQILSVSVYPSEFGLKRMEEEAVKGPVGLF 1519
THRLA+VN+DW ++AVDLYV+++SFLPKGGQILSV+VYPSEFGL+RM+EE + GPVGLF
Sbjct: 211 THRLAVVNLDWRHVKAVDLYVVLSSFLPKGGQILSVAVYPSEFGLQRMKEEELHGPVGLF 270
Query: 1518 DSDKETSDAEDND-----EIDNEKLRAYEKSRLSYYYAVVECDSSATADYIYKTCDGMEL 1354
D +++ +D +D+D E+DNEKLRAYE SRL YYYAVVECDS ATADY+YKTCDG+E
Sbjct: 271 DGEQKKNDEDDDDDNDDEEMDNEKLRAYEMSRLRYYYAVVECDSIATADYLYKTCDGVEF 330
Query: 1353 ERTSNVLDLRFIPDSRQFEHPPRDVATEAPTKYEGLDFQTQALQQSKIHLSWDEDEPQRA 1174
ER+SN+LDLRFIPDS +FEHPPRD ATEAP+ YE L+F T ALQ SKIHLSWDEDEPQR
Sbjct: 331 ERSSNILDLRFIPDSMKFEHPPRDTATEAPSSYEVLNFHTPALQHSKIHLSWDEDEPQRV 390
Query: 1173 KTLGRKLNADQLAELEWKEFLAXXXXXXXXXXXXXXXXXSARTLDKADKLRALLQAXXXX 994
K L RK NADQLA+LE KEFLA + K DK RALLQ+
Sbjct: 391 KALKRKFNADQLADLELKEFLASDESESDDESDDGEDQVDKKR-KKGDKYRALLQS---D 446
Query: 993 XXXXXXXXXDMEVTFNTGLEDISKRILESKKDKKSETVWDAYLXXXXXXXXXXXXXXXXX 814
DMEVTFNTGLEDISKRILE KKDKKSET+W+A+L
Sbjct: 447 EDGEQDGGQDMEVTFNTGLEDISKRILE-KKDKKSETLWEAHLRKKHEKRMASRNKSADS 505
Query: 813 XXXXXXXXXXEAPEQPDDFFVEEASVKNSKLGKGSCXXXXXXXXXXXXXXXXXXXXXXXX 634
E E+ DDFFVEE VK S GK
Sbjct: 506 SDDESSDTDREV-EEVDDFFVEEPPVKES--GKDRTKNIKGREHVGEDGAAEASRAELEL 562
Query: 633 XXXEVNHXXXXXXXXXXXXXXXXXXLPAEDKLPSVVDFQDPRFSALFTSPLFALDPTDPQ 454
+ + + VD+ DPRFSALF SPLFALDPTDPQ
Sbjct: 563 LLADDDGVDTSIKGYNLKHKKKKGKEDITEDKIPTVDYNDPRFSALFNSPLFALDPTDPQ 622
Query: 453 YKRSATYARQLAQRQQKGLGEEITNXXXXXXXXXXXXXXPDDTISKRSEQVHSETKSSNP 274
+KRSA Y RQ+A +Q KG G + T +D SK V +E SS
Sbjct: 623 FKRSAAYVRQVALKQPKGDGYQPTKSRHGKSSTKQPAAPGEDE-SKGDVSVKTEGDSSKK 681
Query: 273 ---ELSSMIRSLKRKSQQYQAP 217
ELSS+++S+K KS+Q Q P
Sbjct: 682 EKYELSSLVKSIKMKSKQLQLP 703
Score = 111 bits (277), Expect = 1e-21
Identities = 51/74 (68%), Positives = 62/74 (83%)
Frame = -1
Query: 2220 RKIITDARFSSIHSDPRFQKVPKHQSKVSIDSRFNRMFTDKKFSSSSSRIDKRGKPNNQN 2041
+KIITDARFSS+HSDPRFQ PKH++KV IDSRFN+MF DK+FSS+S+ +DKRG+
Sbjct: 42 KKIITDARFSSVHSDPRFQNAPKHKAKVVIDSRFNQMFKDKRFSSTSTALDKRGRVKKGK 101
Query: 2040 SANPLRHYYKIEEE 1999
S NPLR YYKIEE+
Sbjct: 102 SENPLRRYYKIEEK 115
>ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-like [Vitis vinifera]
Length = 726
Score = 377 bits (968), Expect = e-102
Identities = 197/325 (60%), Positives = 234/325 (72%)
Frame = -1
Query: 1698 THRLAIVNMDWSQLRAVDLYVMMNSFLPKGGQILSVSVYPSEFGLKRMEEEAVKGPVGLF 1519
THRLA+VNM+W Q++AVDL+++++SFLPK G ILSV++YPSEFGLKRMEEEAV GP+GLF
Sbjct: 186 THRLAVVNMEWRQVKAVDLFMVLSSFLPKDGHILSVAIYPSEFGLKRMEEEAVHGPIGLF 245
Query: 1518 DSDKETSDAEDNDEIDNEKLRAYEKSRLSYYYAVVECDSSATADYIYKTCDGMELERTSN 1339
D +KE SD + ++EID+EKLRAYEKSRLSYYYAVV+CDSSATADY+YK CDG+E ER+SN
Sbjct: 246 DDEKEQSDDDGDNEIDDEKLRAYEKSRLSYYYAVVDCDSSATADYLYKACDGIEFERSSN 305
Query: 1338 VLDLRFIPDSRQFEHPPRDVATEAPTKYEGLDFQTQALQQSKIHLSWDEDEPQRAKTLGR 1159
VLDLRFIPDS +F+HPP D+ATEAP KYEGLDF T+ALQ SKIH+SWDEDEPQRAKTL R
Sbjct: 306 VLDLRFIPDSMEFKHPPHDIATEAPAKYEGLDFHTRALQHSKIHISWDEDEPQRAKTLKR 365
Query: 1158 KLNADQLAELEWKEFLAXXXXXXXXXXXXXXXXXSARTLDKADKLRALLQAXXXXXXXXX 979
K N D++AEL KEFLA + + +K ALL++
Sbjct: 366 KYNDDEVAELAMKEFLASDTDESETDDNENDDQSD-KEHKRQNKYLALLESGDGSDRDDE 424
Query: 978 XXXXDMEVTFNTGLEDISKRILESKKDKKSETVWDAYLXXXXXXXXXXXXXXXXXXXXXX 799
DMEVTFNTGLEDISKRILE K++KKSETVW+AYL
Sbjct: 425 EDGQDMEVTFNTGLEDISKRILE-KREKKSETVWEAYLKKRSEKRKARKNRSKYSSEDES 483
Query: 798 XXXXXEAPEQPDDFFVEEASVKNSK 724
E EQPDDFFVEE S K +K
Sbjct: 484 DDTDQELMEQPDDFFVEEHSAKGTK 508
Score = 121 bits (304), Expect = 8e-25
Identities = 55/77 (71%), Positives = 65/77 (84%)
Frame = -1
Query: 2226 NGRKIITDARFSSIHSDPRFQKVPKHQSKVSIDSRFNRMFTDKKFSSSSSRIDKRGKPNN 2047
NG KI+TDARFSS+HSDPRFQKVPKH++KV IDSRFNRMF DK F+SSS+ +DKRGKP
Sbjct: 32 NGGKIVTDARFSSLHSDPRFQKVPKHKTKVEIDSRFNRMFHDKSFTSSSAPLDKRGKPKK 91
Query: 2046 QNSANPLRHYYKIEEEE 1996
S N L HYY++EE+E
Sbjct: 92 DRSGNTLSHYYRLEEQE 108
Score = 104 bits (260), Expect = 1e-19
Identities = 59/120 (49%), Positives = 76/120 (63%), Gaps = 3/120 (2%)
Frame = -1
Query: 555 PAEDKLPSVVDFQDPRFSALFTSPLFALDPTDPQYKRSATYARQLAQRQQKGLGEEITNX 376
P EDK+P+V D+ DPRFS+LFTSPLFALDPTDPQ+KRSATYARQLAQ+QQ+ +
Sbjct: 570 PDEDKIPAV-DYDDPRFSSLFTSPLFALDPTDPQFKRSATYARQLAQKQQQKSDGDALRG 628
Query: 375 XXXXXXXXXXXXXPDDTISKRSEQVHSETKSS---NPELSSMIRSLKRKSQQYQAPCNVK 205
D + + E + S+ SS ELSS++RS+K KS+Q + P N K
Sbjct: 629 KEAMKLQKQTRPSSDGPEANKDEPLMSDVLSSKREKHELSSLVRSIKTKSKQVKLPSNGK 688
>emb|CBI25839.3| unnamed protein product [Vitis vinifera]
Length = 738
Score = 376 bits (965), Expect = e-101
Identities = 197/325 (60%), Positives = 233/325 (71%)
Frame = -1
Query: 1698 THRLAIVNMDWSQLRAVDLYVMMNSFLPKGGQILSVSVYPSEFGLKRMEEEAVKGPVGLF 1519
THRLA+VNM+W Q++AVDL+++++SFLPK G ILSV++YPSEFGLKRMEEEAV GP+GLF
Sbjct: 186 THRLAVVNMEWRQVKAVDLFMVLSSFLPKDGHILSVAIYPSEFGLKRMEEEAVHGPIGLF 245
Query: 1518 DSDKETSDAEDNDEIDNEKLRAYEKSRLSYYYAVVECDSSATADYIYKTCDGMELERTSN 1339
D +KE SD + ++EID+EKLRAYEKSRLSYYYAVV+CDSSATADY+YK CDG+E ER+SN
Sbjct: 246 DDEKEQSDDDGDNEIDDEKLRAYEKSRLSYYYAVVDCDSSATADYLYKACDGIEFERSSN 305
Query: 1338 VLDLRFIPDSRQFEHPPRDVATEAPTKYEGLDFQTQALQQSKIHLSWDEDEPQRAKTLGR 1159
VLDLRFIPDS +F+HPP D+ATEAP KYEGLDF T+ALQ SKIH+SWDEDEPQRAKTL R
Sbjct: 306 VLDLRFIPDSMEFKHPPHDIATEAPAKYEGLDFHTRALQHSKIHISWDEDEPQRAKTLKR 365
Query: 1158 KLNADQLAELEWKEFLAXXXXXXXXXXXXXXXXXSARTLDKADKLRALLQAXXXXXXXXX 979
K N D+ AEL KEFLA + + +K ALL++
Sbjct: 366 KYNDDEQAELAMKEFLASDTDESETDDNENDDQSD-KEHKRQNKYLALLESGDGSDRDDE 424
Query: 978 XXXXDMEVTFNTGLEDISKRILESKKDKKSETVWDAYLXXXXXXXXXXXXXXXXXXXXXX 799
DMEVTFNTGLEDISKRILE K++KKSETVW+AYL
Sbjct: 425 EDGQDMEVTFNTGLEDISKRILE-KREKKSETVWEAYLKKRSEKRKARKNRSKYSSEDES 483
Query: 798 XXXXXEAPEQPDDFFVEEASVKNSK 724
E EQPDDFFVEE S K +K
Sbjct: 484 DDTDQELMEQPDDFFVEEHSAKGTK 508
Score = 121 bits (304), Expect = 8e-25
Identities = 55/77 (71%), Positives = 65/77 (84%)
Frame = -1
Query: 2226 NGRKIITDARFSSIHSDPRFQKVPKHQSKVSIDSRFNRMFTDKKFSSSSSRIDKRGKPNN 2047
NG KI+TDARFSS+HSDPRFQKVPKH++KV IDSRFNRMF DK F+SSS+ +DKRGKP
Sbjct: 32 NGGKIVTDARFSSLHSDPRFQKVPKHKTKVEIDSRFNRMFHDKSFTSSSAPLDKRGKPKK 91
Query: 2046 QNSANPLRHYYKIEEEE 1996
S N L HYY++EE+E
Sbjct: 92 DRSGNTLSHYYRLEEQE 108
Score = 104 bits (260), Expect = 1e-19
Identities = 59/120 (49%), Positives = 76/120 (63%), Gaps = 3/120 (2%)
Frame = -1
Query: 555 PAEDKLPSVVDFQDPRFSALFTSPLFALDPTDPQYKRSATYARQLAQRQQKGLGEEITNX 376
P EDK+P+V D+ DPRFS+LFTSPLFALDPTDPQ+KRSATYARQLAQ+QQ+ +
Sbjct: 570 PDEDKIPAV-DYDDPRFSSLFTSPLFALDPTDPQFKRSATYARQLAQKQQQKSDGDALRG 628
Query: 375 XXXXXXXXXXXXXPDDTISKRSEQVHSETKSS---NPELSSMIRSLKRKSQQYQAPCNVK 205
D + + E + S+ SS ELSS++RS+K KS+Q + P N K
Sbjct: 629 KEAMKLQKQTRPSSDGPEANKDEPLMSDVLSSKREKHELSSLVRSIKTKSKQVKLPSNGK 688