BLASTX nr result

ID: Cimicifuga21_contig00011557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011557
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304799.1| multidrug resistance protein ABC transporter...   107   4e-21
ref|XP_002335344.1| multidrug resistance protein ABC transporter...   105   1e-20
ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3...   104   2e-20
emb|CBI39697.3| unnamed protein product [Vitis vinifera]              104   2e-20
ref|XP_002303920.1| multidrug resistance protein ABC transporter...   104   2e-20

>ref|XP_002304799.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222842231|gb|EEE79778.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 131

 Score =  107 bits (267), Expect = 4e-21
 Identities = 54/71 (76%), Positives = 62/71 (87%)
 Frame = +1

Query: 1   RKHFSDSIVITIAHRITSVLDSDMVLLIDHGLILENDSPSKLLENKSSLFAKLVAEYTVR 180
           R+HFSD  VITIAHRITSVLDSDMVLL+ HGLI E DSP++LLENKSS F++LVAEYTVR
Sbjct: 59  RQHFSDCTVITIAHRITSVLDSDMVLLLSHGLIEEYDSPTRLLENKSSSFSQLVAEYTVR 118

Query: 181 SSPSFDNDTGL 213
           S+ SF+  TGL
Sbjct: 119 SNTSFEKSTGL 129


>ref|XP_002335344.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222834162|gb|EEE72639.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 131

 Score =  105 bits (262), Expect = 1e-20
 Identities = 53/71 (74%), Positives = 61/71 (85%)
 Frame = +1

Query: 1   RKHFSDSIVITIAHRITSVLDSDMVLLIDHGLILENDSPSKLLENKSSLFAKLVAEYTVR 180
           R+HFSD  VITIAHRITSVLDSDMVLL+ HGLI E DSP++LLENKSS F++LVAEYTVR
Sbjct: 59  RQHFSDCTVITIAHRITSVLDSDMVLLLSHGLIEEYDSPTRLLENKSSSFSQLVAEYTVR 118

Query: 181 SSPSFDNDTGL 213
           S+  F+  TGL
Sbjct: 119 SNTRFEKSTGL 129


>ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  104 bits (260), Expect = 2e-20
 Identities = 52/67 (77%), Positives = 60/67 (89%)
 Frame = +1

Query: 1    RKHFSDSIVITIAHRITSVLDSDMVLLIDHGLILENDSPSKLLENKSSLFAKLVAEYTVR 180
            R+HF DS VITIAHRITSVLDSDMVLL+DHGL+ E D+P++LLENKSS FAKLVAEYTVR
Sbjct: 1418 RQHFVDSTVITIAHRITSVLDSDMVLLLDHGLVEEYDTPTRLLENKSSSFAKLVAEYTVR 1477

Query: 181  SSPSFDN 201
            S+ S +N
Sbjct: 1478 SNSSLEN 1484


>emb|CBI39697.3| unnamed protein product [Vitis vinifera]
          Length = 1284

 Score =  104 bits (260), Expect = 2e-20
 Identities = 52/67 (77%), Positives = 60/67 (89%)
 Frame = +1

Query: 1    RKHFSDSIVITIAHRITSVLDSDMVLLIDHGLILENDSPSKLLENKSSLFAKLVAEYTVR 180
            R+HF DS VITIAHRITSVLDSDMVLL+DHGL+ E D+P++LLENKSS FAKLVAEYTVR
Sbjct: 1214 RQHFVDSTVITIAHRITSVLDSDMVLLLDHGLVEEYDTPTRLLENKSSSFAKLVAEYTVR 1273

Query: 181  SSPSFDN 201
            S+ S +N
Sbjct: 1274 SNSSLEN 1280


>ref|XP_002303920.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222841352|gb|EEE78899.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1305

 Score =  104 bits (260), Expect = 2e-20
 Identities = 52/71 (73%), Positives = 61/71 (85%)
 Frame = +1

Query: 1    RKHFSDSIVITIAHRITSVLDSDMVLLIDHGLILENDSPSKLLENKSSLFAKLVAEYTVR 180
            R+HFSD  VITIAHRITSVLDSDMVLL+ HGLI E DSP++LLENKSS F++LVAEYTVR
Sbjct: 1234 RQHFSDCTVITIAHRITSVLDSDMVLLLSHGLIEEYDSPTRLLENKSSSFSQLVAEYTVR 1293

Query: 181  SSPSFDNDTGL 213
            S+ SF+   G+
Sbjct: 1294 SNTSFEKSAGI 1304


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