BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011552
         (1652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1...   606   e-171
emb|CBI21810.3| unnamed protein product [Vitis vinifera]              601   e-169
ref|XP_002332188.1| predicted protein [Populus trichocarpa] gi|2...   591   e-166
ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1...   588   e-165
ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [S...   585   e-165

>ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Vitis vinifera]
          Length = 415

 Score =  606 bits (1563), Expect = e-171
 Identities = 318/422 (75%), Positives = 341/422 (80%), Gaps = 4/422 (0%)
 Frame = +3

Query: 186  MEATNSLLKPRYFHLKTTPKSPFPPLRFPVSRLAFSSVKQGFKPQHAKPRSEF----NGA 353
            M+     L   +F LKT   S FP    P           G K Q  + R EF    NGA
Sbjct: 1    MDLGRLALNFHHFPLKTLLPSAFPSSSLPPH--------MGAKRQQMRLRCEFEVKVNGA 52

Query: 354  LSGDTDPRFIDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGG 533
            LS D DPRF+DRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGG
Sbjct: 53   LSSDPDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGG 112

Query: 534  LPKGRIVEIFGPESSGKTTLALHAIAEVQKSGGNAMLVDAEHAFDPAYSKALGVDIENLI 713
            LPKGRIVEI+GPESSGKTTLALHAIAEVQK GGNAMLVDAEHAFDPAYSKALGVD+ENLI
Sbjct: 113  LPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLI 172

Query: 714  VCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQAL 893
            VCQPD+GEMALE ADRMCRSGA+DLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQAL
Sbjct: 173  VCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQAL 232

Query: 894  RKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVK 1073
            RKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLEIR  GKIKS K
Sbjct: 233  RKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKIKSSK 292

Query: 1074 GDEDIGLXXXXXXXXXXXXXPYKQAEFDIVFGQGVSQLGCILDCAETMDVIVKKGSWYSY 1253
            GDEDIGL             PYKQAEF+I+FG+GVS+LGCILDCAE MDV+VKKGSWYSY
Sbjct: 293  GDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAELMDVVVKKGSWYSY 352

Query: 1254 EDHRLGQGRDKALQYLRENPPLCGEIEKVVRSKMAVATGQESLNHTRPSLPLQDEDQFAE 1433
             D+RLGQGRD+ALQYLRENP +C EIEK+VR  MA   GQ    H R S    +++   E
Sbjct: 353  GDNRLGQGRDRALQYLRENPLVCHEIEKIVRPMMAEGIGQLGAPHVRLSPTSPEDEDILE 412

Query: 1434 EM 1439
            E+
Sbjct: 413  EI 414


>emb|CBI21810.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score =  601 bits (1550), Expect = e-169
 Identities = 308/382 (80%), Positives = 329/382 (86%), Gaps = 4/382 (1%)
 Frame = +3

Query: 306  GFKPQHAKPRSEF----NGALSGDTDPRFIDRQKALEAAMNDINSSFGKGSVTRLGSAGG 473
            G K Q  + R EF    NGALS D DPRF+DRQKALEAAMNDINSSFGKGSVTRLGSAGG
Sbjct: 2    GAKRQQMRLRCEFEVKVNGALSSDPDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGG 61

Query: 474  ALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKSGGNAMLVDA 653
            ALVETFPSGCLTLD ALGGGLPKGRIVEI+GPESSGKTTLALHAIAEVQK GGNAMLVDA
Sbjct: 62   ALVETFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDA 121

Query: 654  EHAFDPAYSKALGVDIENLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEI 833
            EHAFDPAYSKALGVD+ENLIVCQPD+GEMALE ADRMCRSGA+DLICVDSVSALTPRAEI
Sbjct: 122  EHAFDPAYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEI 181

Query: 834  EGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIAL 1013
            EGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIAL
Sbjct: 182  EGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIAL 241

Query: 1014 KFFASVRLEIRSTGKIKSVKGDEDIGLXXXXXXXXXXXXXPYKQAEFDIVFGQGVSQLGC 1193
            KFFAS+RLEIR  GKIKS KGDEDIGL             PYKQAEF+I+FG+GVS+LGC
Sbjct: 242  KFFASLRLEIRPIGKIKSSKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC 301

Query: 1194 ILDCAETMDVIVKKGSWYSYEDHRLGQGRDKALQYLRENPPLCGEIEKVVRSKMAVATGQ 1373
            ILDCAE MDV+VKKGSWYSY D+RLGQGRD+ALQYLRENP +C EIEK+VR  MA   GQ
Sbjct: 302  ILDCAELMDVVVKKGSWYSYGDNRLGQGRDRALQYLRENPLVCHEIEKIVRPMMAEGIGQ 361

Query: 1374 ESLNHTRPSLPLQDEDQFAEEM 1439
                H R S    +++   EE+
Sbjct: 362  LGAPHVRLSPTSPEDEDILEEI 383


>ref|XP_002332188.1| predicted protein [Populus trichocarpa] gi|222875295|gb|EEF12426.1|
            predicted protein [Populus trichocarpa]
          Length = 387

 Score =  591 bits (1524), Expect = e-166
 Identities = 308/379 (81%), Positives = 329/379 (86%), Gaps = 6/379 (1%)
 Frame = +3

Query: 249  PFPPLRFPVSRLAF-----SSVKQGFKPQHAKPRSEFNGA-LSGDTDPRFIDRQKALEAA 410
            P  PL F  SR+ F     ++VK+  K    +  S+ NG+ LS D D RF+D+QKALEAA
Sbjct: 3    PSLPLYFQFSRVCFKTSHFAAVKKKPKEIRCEFDSKVNGSPLSSDLDARFLDKQKALEAA 62

Query: 411  MNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSGKTT 590
            MNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLPKGRIVEIFGPESSGKTT
Sbjct: 63   MNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEIFGPESSGKTT 122

Query: 591  LALHAIAEVQKSGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALETADRMCR 770
            LALHAIAEVQK GG+AMLVDAEHAFDPAYSKALGVD+ENLIVCQPDNGEMALE ADRMCR
Sbjct: 123  LALHAIAEVQKFGGHAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALEIADRMCR 182

Query: 771  SGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQ 950
            SGAVDLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTLIFLNQ
Sbjct: 183  SGAVDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQ 242

Query: 951  IRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDIGLXXXXXXXXXXXX 1130
            IRYKIGV+YGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED+G+            
Sbjct: 243  IRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVS 302

Query: 1131 XPYKQAEFDIVFGQGVSQLGCILDCAETMDVIVKKGSWYSYEDHRLGQGRDKALQYLREN 1310
             PYKQAEF+I+FG+GVSQLGCILDCAE MDV+VKKGSWYSY DHRLGQGRDKALQYLR+N
Sbjct: 303  RPYKQAEFEIIFGEGVSQLGCILDCAEMMDVVVKKGSWYSYGDHRLGQGRDKALQYLRDN 362

Query: 1311 PPLCGEIEKVVRSKMAVAT 1367
            P L  EIEK VRS M   T
Sbjct: 363  PHLQEEIEKKVRSTMTDGT 381


>ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Glycine max]
          Length = 414

 Score =  588 bits (1517), Expect = e-165
 Identities = 311/414 (75%), Positives = 339/414 (81%), Gaps = 5/414 (1%)
 Frame = +3

Query: 207  LKPRYFHLKTTPKSPFPPLRFPVSRLAFSSVKQGFKPQHAKPRSEF----NGALSGDTDP 374
            LKP    LK  P S      FP+   A ++ K      HA  + E     NGALSGD DP
Sbjct: 7    LKPHCVILKA-PLSSSLLFPFPLRFRAVTAFK------HANIQCELEGRPNGALSGDFDP 59

Query: 375  RFIDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIV 554
            RFIDRQKALEAAMNDIN++FGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLPKGRI+
Sbjct: 60   RFIDRQKALEAAMNDINNNFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRII 119

Query: 555  EIFGPESSGKTTLALHAIAEVQKSGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNG 734
            EI+GPESSGKTTLALHAIAEVQK GGNAMLVDAEHAFDPAYSKALGVD+ENLIVCQPD+G
Sbjct: 120  EIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDHG 179

Query: 735  EMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNA 914
            EMALE ADRMCRSGA+DLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNA
Sbjct: 180  EMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 239

Query: 915  SKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDIGL 1094
            SKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLE+R TGKIKS KGDE+IGL
Sbjct: 240  SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRPTGKIKSAKGDEEIGL 299

Query: 1095 XXXXXXXXXXXXXPYKQAEFDIVFGQGVSQLGCILDCAETMDVIVKKGSWYSYEDHRLGQ 1274
                         PYK AEF+I+FG+G+S+LGCILDCAE  D++ KKGSWYSY DHRLGQ
Sbjct: 300  KVRLRVQKSKVSRPYKIAEFEIIFGEGISKLGCILDCAEMTDIVSKKGSWYSYGDHRLGQ 359

Query: 1275 GRDKALQYLRENPPLCGEIEKVVRSKMAVATGQESLNHTRPSLPL-QDEDQFAE 1433
            GRDKA+QYL+EN  L  EIEKVVRS +   T Q S  H + S  L QD+D F E
Sbjct: 360  GRDKAIQYLKENTHLLEEIEKVVRSSLIDGTNQTSPVHMKNSSVLHQDDDMFEE 413


>ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [Sorghum bicolor]
            gi|241920620|gb|EER93764.1| hypothetical protein
            SORBIDRAFT_01g013810 [Sorghum bicolor]
          Length = 415

 Score =  585 bits (1509), Expect = e-165
 Identities = 301/405 (74%), Positives = 333/405 (82%), Gaps = 5/405 (1%)
 Frame = +3

Query: 237  TPKSPFPPLRFPVSRLAFSSVKQGFKPQHAKPRSEF-----NGALSGDTDPRFIDRQKAL 401
            T  +P  P R    R A  +   G   +  + R EF     NGALSG+ DPR +DRQKAL
Sbjct: 11   THLAPSFPARSRRRRAAPRAAAGGLTARARRLRCEFVAGGGNGALSGEDDPRLVDRQKAL 70

Query: 402  EAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGPESSG 581
            +AAMNDINSSFGKGSVTRLGSAGGA VETFPSGCLTLD ALGGGLPKGR+VE++GPESSG
Sbjct: 71   DAAMNDINSSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESSG 130

Query: 582  KTTLALHAIAEVQKSGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALETADR 761
            KTTLALHAIAEVQK GGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALE ADR
Sbjct: 131  KTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEIADR 190

Query: 762  MCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIF 941
            MCRSGA+DLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL+F
Sbjct: 191  MCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMF 250

Query: 942  LNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDIGLXXXXXXXXX 1121
            LNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIR  GKIKS KGDED+G+         
Sbjct: 251  LNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRPIGKIKSPKGDEDVGVKVRVRVQKS 310

Query: 1122 XXXXPYKQAEFDIVFGQGVSQLGCILDCAETMDVIVKKGSWYSYEDHRLGQGRDKALQYL 1301
                PYKQAEF+I+FG+GVS+LGC+LDCAE MDV+ KKGSWYSY+D RLGQGR+KALQYL
Sbjct: 311  KVSRPYKQAEFEIIFGEGVSKLGCVLDCAELMDVVAKKGSWYSYKDIRLGQGREKALQYL 370

Query: 1302 RENPPLCGEIEKVVRSKMAVATGQESLNHTRPSLPLQDEDQFAEE 1436
            RE+P +C EIEKVVR+ +   +   SL     +   +DE  + E+
Sbjct: 371  RESPTICDEIEKVVRAMIPEGSRHMSLLAFGQTSSTEDEQVYDEQ 415