BLASTX nr result
ID: Cimicifuga21_contig00011549
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00011549
(1670 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subuni... 722 0.0
emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera] 722 0.0
ref|NP_973664.1| DNA polymerase delta subunit 2 [Arabidopsis tha... 701 0.0
ref|NP_181742.2| DNA polymerase delta subunit 2 [Arabidopsis tha... 697 0.0
ref|XP_002309305.1| predicted protein [Populus trichocarpa] gi|2... 696 0.0
>ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subunit [Vitis vinifera]
gi|297739835|emb|CBI30017.3| unnamed protein product
[Vitis vinifera]
Length = 439
Score = 722 bits (1863), Expect = 0.0
Identities = 338/439 (76%), Positives = 387/439 (88%)
Frame = +3
Query: 66 MEVDAANNLERKQSLYQSLDEKFEIQKEKYTGQQYSQIYFARLHIIRNLLYTLAQKWKPH 245
ME+DA +L+RKQSLY+SLDEKF I+KE Y GQQYSQIYFARLH++R L+Y+L WKPH
Sbjct: 1 MEIDAEKHLQRKQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPH 60
Query: 246 LPICTVLGLEKGKECIVVGTLYKHMKLKPCVLDEYSKERSVVPIVKPHNFMHPDDQLILE 425
LP+CTVLGLE+GKECI+VGTLYKHMKLKPC+LDEYSKERSV P+VKPHNFMH DD L+LE
Sbjct: 61 LPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVLE 120
Query: 426 DESGRVKLGGNVLSPSFFVTGIVVALHGNETNAGDFLVHDILEAGLPPQIERPLNSREDK 605
DESGRVKLGG +L PS +VTG VV LHG ET+AG+FLV DIL+A LPPQIE PL SREDK
Sbjct: 121 DESGRVKLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDK 180
Query: 606 FXXXXXXXXXXXXXXNPLQFQLLVDHITGHLGDDKEQVIASQIVHVVIAGNSVEVPHGLL 785
+ NPLQFQLLVDHITGHLGD+KEQ IA+QIVHVVIAGNSV VP GLL
Sbjct: 181 YVVFVSGLSVGSSTSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPRGLL 240
Query: 786 NGQTLAAKDQSRLSEPVKELDILLTQLAAAVPVDIMPGLSDPANFALPQQPLHRCLFPGA 965
NGQ LA+KDQSRLSEP+KELDILLTQ+AA +P+DIMPG DPANF+LPQQPLHRCLFPG+
Sbjct: 241 NGQNLASKDQSRLSEPIKELDILLTQIAAGLPLDIMPGPDDPANFSLPQQPLHRCLFPGS 300
Query: 966 SAYNTFMSCTNPHLFEIDNVSFLGTSGQNIDDLDKYSEAKDKLEFMDRTLRWRHVAPTAP 1145
SAYN+F SCTNPH FE++N+ FLGTSGQN+DDL+KYSEAKDKLEFM+RTLRWRH+APTAP
Sbjct: 301 SAYNSFRSCTNPHSFELENIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360
Query: 1146 NTLGCYPFSDRDPFLVESCPNVYFVGNQNKYDTRISKGSDGQLVRLICIPKFCESGVAVM 1325
NTLGCYPF+DRDPFL+ESCP+VYFVGNQ+KY+TR+ KGS+GQ+VRLICIPKFCE+GVAV+
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFVGNQDKYETRLIKGSEGQVVRLICIPKFCETGVAVV 420
Query: 1326 LNLRNLECHTLSFSTHLDS 1382
LN+RNLECH LSF T S
Sbjct: 421 LNMRNLECHALSFGTEFSS 439
>emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]
Length = 439
Score = 722 bits (1863), Expect = 0.0
Identities = 339/439 (77%), Positives = 388/439 (88%)
Frame = +3
Query: 66 MEVDAANNLERKQSLYQSLDEKFEIQKEKYTGQQYSQIYFARLHIIRNLLYTLAQKWKPH 245
ME+DA +L+RKQSLY+SLDEKF I+KE Y GQQYSQIYFARLH++R L+Y+L WKPH
Sbjct: 1 MEIDAEKHLQRKQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPH 60
Query: 246 LPICTVLGLEKGKECIVVGTLYKHMKLKPCVLDEYSKERSVVPIVKPHNFMHPDDQLILE 425
LP+CTVLGLE+GKECI+VGTLYKHMKLKPC+LDEYSKERSV P+VKPHNFMH DD L+LE
Sbjct: 61 LPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVLE 120
Query: 426 DESGRVKLGGNVLSPSFFVTGIVVALHGNETNAGDFLVHDILEAGLPPQIERPLNSREDK 605
DESGRVKLGG +L PS +VTG VV LHG ET+AG+FLV DIL+A LPPQIE PL SREDK
Sbjct: 121 DESGRVKLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDK 180
Query: 606 FXXXXXXXXXXXXXXNPLQFQLLVDHITGHLGDDKEQVIASQIVHVVIAGNSVEVPHGLL 785
+ NPLQFQLLVDHITGHLGD+KEQ IA+QIVHVVIAGNSV VP GLL
Sbjct: 181 YVVFVSGLSVGSSXSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPRGLL 240
Query: 786 NGQTLAAKDQSRLSEPVKELDILLTQLAAAVPVDIMPGLSDPANFALPQQPLHRCLFPGA 965
NGQ LA+KDQSRLSEP+KELDILLTQ+AA +P+DIMPG DPANF+LPQQPLHRCLFPG+
Sbjct: 241 NGQNLASKDQSRLSEPIKELDILLTQIAAGLPLDIMPGPDDPANFSLPQQPLHRCLFPGS 300
Query: 966 SAYNTFMSCTNPHLFEIDNVSFLGTSGQNIDDLDKYSEAKDKLEFMDRTLRWRHVAPTAP 1145
SAYN+F SCTNPH FE++N+ FLGTSGQN+DDL+KYSEAKDKLEFM+RTLRWRH+APTAP
Sbjct: 301 SAYNSFRSCTNPHSFELENIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360
Query: 1146 NTLGCYPFSDRDPFLVESCPNVYFVGNQNKYDTRISKGSDGQLVRLICIPKFCESGVAVM 1325
NTLGCYPF+DRDPFL+ESCP+VYFVGNQ+KY+TR+ KGS+GQ+VRLICIPKFCE+GVAV+
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFVGNQDKYETRLIKGSEGQVVRLICIPKFCETGVAVV 420
Query: 1326 LNLRNLECHTLSFSTHLDS 1382
LN+RNLECH LSF T S
Sbjct: 421 LNMRNLECHALSFGTEFSS 439
>ref|NP_973664.1| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
gi|322510023|sp|O48520.2|DPOD2_ARATH RecName: Full=DNA
polymerase delta small subunit gi|22531160|gb|AAM97084.1|
putative DNA polymerase delta small subunit [Arabidopsis
thaliana] gi|31376377|gb|AAP49515.1| At2g42120
[Arabidopsis thaliana] gi|62320658|dbj|BAD95325.1| DNA
polymerase delta small subunit like protein [Arabidopsis
thaliana] gi|330254978|gb|AEC10072.1| DNA polymerase
delta subunit 2 [Arabidopsis thaliana]
Length = 440
Score = 701 bits (1810), Expect = 0.0
Identities = 329/438 (75%), Positives = 381/438 (86%)
Frame = +3
Query: 66 MEVDAANNLERKQSLYQSLDEKFEIQKEKYTGQQYSQIYFARLHIIRNLLYTLAQKWKPH 245
ME+D+ ERKQS Y SLDE+FEIQKE Y GQQYSQIYFARLH++R LLY+LA WK H
Sbjct: 1 MEIDSEKIHERKQSDYNSLDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKSH 60
Query: 246 LPICTVLGLEKGKECIVVGTLYKHMKLKPCVLDEYSKERSVVPIVKPHNFMHPDDQLILE 425
LP+C VLGLEKGKECI+VGTL+KHMKLKPCVLDEYSKERSV P+VKPHNFMHPDD LILE
Sbjct: 61 LPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLILE 120
Query: 426 DESGRVKLGGNVLSPSFFVTGIVVALHGNETNAGDFLVHDILEAGLPPQIERPLNSREDK 605
DESGRVKL G+ LSP+ +VTG+VVALHG ETNAG+F V D+LEAGLPPQIERP++ +EDK
Sbjct: 121 DESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQEDK 180
Query: 606 FXXXXXXXXXXXXXXNPLQFQLLVDHITGHLGDDKEQVIASQIVHVVIAGNSVEVPHGLL 785
+ NPLQFQLLVDHITGHLGD++EQ +A+QIVHVVIAGNS E P L+
Sbjct: 181 YVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRKLI 240
Query: 786 NGQTLAAKDQSRLSEPVKELDILLTQLAAAVPVDIMPGLSDPANFALPQQPLHRCLFPGA 965
NGQ LA+KDQS L EP+KELDI+L+Q+AA V VDIMPG +DPANFALPQQPL+RCLFPG+
Sbjct: 241 NGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPGS 300
Query: 966 SAYNTFMSCTNPHLFEIDNVSFLGTSGQNIDDLDKYSEAKDKLEFMDRTLRWRHVAPTAP 1145
S YNTF SCTNPH F++DN+ FLGTSGQNIDDL KYSEAK KL+F++RTLRWRH+APTAP
Sbjct: 301 SPYNTFRSCTNPHSFDVDNIRFLGTSGQNIDDLGKYSEAKSKLDFVERTLRWRHLAPTAP 360
Query: 1146 NTLGCYPFSDRDPFLVESCPNVYFVGNQNKYDTRISKGSDGQLVRLICIPKFCESGVAVM 1325
NTLGCYPF+DRDPFL+E+CP+VYFVGNQ+KYD R+ KGS+GQLVRLICIPKFCE+G+AV
Sbjct: 361 NTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFCETGIAVA 420
Query: 1326 LNLRNLECHTLSFSTHLD 1379
+NLRNLECHTLSFST ++
Sbjct: 421 VNLRNLECHTLSFSTQIN 438
>ref|NP_181742.2| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
gi|330254979|gb|AEC10073.1| DNA polymerase delta subunit
2 [Arabidopsis thaliana]
Length = 441
Score = 697 bits (1798), Expect = 0.0
Identities = 329/439 (74%), Positives = 381/439 (86%), Gaps = 1/439 (0%)
Frame = +3
Query: 66 MEVDAANNLERKQSLYQSL-DEKFEIQKEKYTGQQYSQIYFARLHIIRNLLYTLAQKWKP 242
ME+D+ ERKQS Y SL DE+FEIQKE Y GQQYSQIYFARLH++R LLY+LA WK
Sbjct: 1 MEIDSEKIHERKQSDYNSLQDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKS 60
Query: 243 HLPICTVLGLEKGKECIVVGTLYKHMKLKPCVLDEYSKERSVVPIVKPHNFMHPDDQLIL 422
HLP+C VLGLEKGKECI+VGTL+KHMKLKPCVLDEYSKERSV P+VKPHNFMHPDD LIL
Sbjct: 61 HLPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLIL 120
Query: 423 EDESGRVKLGGNVLSPSFFVTGIVVALHGNETNAGDFLVHDILEAGLPPQIERPLNSRED 602
EDESGRVKL G+ LSP+ +VTG+VVALHG ETNAG+F V D+LEAGLPPQIERP++ +ED
Sbjct: 121 EDESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQED 180
Query: 603 KFXXXXXXXXXXXXXXNPLQFQLLVDHITGHLGDDKEQVIASQIVHVVIAGNSVEVPHGL 782
K+ NPLQFQLLVDHITGHLGD++EQ +A+QIVHVVIAGNS E P L
Sbjct: 181 KYVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRKL 240
Query: 783 LNGQTLAAKDQSRLSEPVKELDILLTQLAAAVPVDIMPGLSDPANFALPQQPLHRCLFPG 962
+NGQ LA+KDQS L EP+KELDI+L+Q+AA V VDIMPG +DPANFALPQQPL+RCLFPG
Sbjct: 241 INGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPG 300
Query: 963 ASAYNTFMSCTNPHLFEIDNVSFLGTSGQNIDDLDKYSEAKDKLEFMDRTLRWRHVAPTA 1142
+S YNTF SCTNPH F++DN+ FLGTSGQNIDDL KYSEAK KL+F++RTLRWRH+APTA
Sbjct: 301 SSPYNTFRSCTNPHSFDVDNIRFLGTSGQNIDDLGKYSEAKSKLDFVERTLRWRHLAPTA 360
Query: 1143 PNTLGCYPFSDRDPFLVESCPNVYFVGNQNKYDTRISKGSDGQLVRLICIPKFCESGVAV 1322
PNTLGCYPF+DRDPFL+E+CP+VYFVGNQ+KYD R+ KGS+GQLVRLICIPKFCE+G+AV
Sbjct: 361 PNTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFCETGIAV 420
Query: 1323 MLNLRNLECHTLSFSTHLD 1379
+NLRNLECHTLSFST ++
Sbjct: 421 AVNLRNLECHTLSFSTQIN 439
>ref|XP_002309305.1| predicted protein [Populus trichocarpa] gi|222855281|gb|EEE92828.1|
predicted protein [Populus trichocarpa]
Length = 442
Score = 696 bits (1795), Expect = 0.0
Identities = 331/436 (75%), Positives = 375/436 (86%)
Frame = +3
Query: 57 MEAMEVDAANNLERKQSLYQSLDEKFEIQKEKYTGQQYSQIYFARLHIIRNLLYTLAQKW 236
M ME+D N++RK+S YQSLDE F+IQ E Y GQQYSQIYFARLH++R LLY+L W
Sbjct: 1 MTGMEIDIEKNIQRKRSTYQSLDETFDIQNETYRGQQYSQIYFARLHLMRTLLYSLVTHW 60
Query: 237 KPHLPICTVLGLEKGKECIVVGTLYKHMKLKPCVLDEYSKERSVVPIVKPHNFMHPDDQL 416
KPH+P+CTVLGLE+GKECI+VGTLYKHMKLKPCVLDEYSKERS VP+VKPHNFMHPDD L
Sbjct: 61 KPHVPVCTVLGLEEGKECIIVGTLYKHMKLKPCVLDEYSKERSAVPLVKPHNFMHPDDHL 120
Query: 417 ILEDESGRVKLGGNVLSPSFFVTGIVVALHGNETNAGDFLVHDILEAGLPPQIERPLNSR 596
+LEDESGRVKLGG VLSPS +VTG VVALHG ET AGDFLV D+ EAGL PQIE L SR
Sbjct: 121 VLEDESGRVKLGGTVLSPSKYVTGGVVALHGKETTAGDFLVLDVFEAGLAPQIEPQLKSR 180
Query: 597 EDKFXXXXXXXXXXXXXXNPLQFQLLVDHITGHLGDDKEQVIASQIVHVVIAGNSVEVPH 776
EDK+ NPLQFQLLVDHITGHLGDD+EQ IA++IVHVV AGNSVE+P
Sbjct: 181 EDKYVVFVSGVSVGSSTSNPLQFQLLVDHITGHLGDDQEQGIAAEIVHVVFAGNSVEIPS 240
Query: 777 GLLNGQTLAAKDQSRLSEPVKELDILLTQLAAAVPVDIMPGLSDPANFALPQQPLHRCLF 956
GLLNGQ LA+KDQSRLSEPV+ELDI LTQ+AA V VDIMPG +DPANFALPQQPL+RCLF
Sbjct: 241 GLLNGQNLASKDQSRLSEPVQELDIWLTQIAAGVSVDIMPGSNDPANFALPQQPLNRCLF 300
Query: 957 PGASAYNTFMSCTNPHLFEIDNVSFLGTSGQNIDDLDKYSEAKDKLEFMDRTLRWRHVAP 1136
PG+ AYNTF CTNPH FE+D V FLGTSGQNIDDL KYSEA+D+LEFM+RTL+WRH+AP
Sbjct: 301 PGSRAYNTFNLCTNPHCFELDGVRFLGTSGQNIDDLKKYSEARDELEFMERTLKWRHLAP 360
Query: 1137 TAPNTLGCYPFSDRDPFLVESCPNVYFVGNQNKYDTRISKGSDGQLVRLICIPKFCESGV 1316
TAPNTLGCYPF+D+DPFL+ESCP+VYFVGNQ+KY T I GS+GQLVRLI +PKFC++G+
Sbjct: 361 TAPNTLGCYPFTDKDPFLIESCPHVYFVGNQDKYGTHILNGSEGQLVRLISVPKFCDTGI 420
Query: 1317 AVMLNLRNLECHTLSF 1364
AV+LNLRNLECHTLSF
Sbjct: 421 AVVLNLRNLECHTLSF 436