BLASTX nr result

ID: Cimicifuga21_contig00011542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011542
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277534.2| PREDICTED: multidrug and toxin extrusion pro...    83   3e-14
emb|CBI21435.3| unnamed protein product [Vitis vinifera]               83   3e-14
ref|XP_002523569.1| multidrug resistance pump, putative [Ricinus...    73   2e-11
ref|XP_002310147.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002509706.1| multidrug resistance pump, putative [Ricinus...    63   3e-08

>ref|XP_002277534.2| PREDICTED: multidrug and toxin extrusion protein 1 [Vitis vinifera]
          Length = 523

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 48/106 (45%), Positives = 63/106 (59%), Gaps = 9/106 (8%)
 Frame = -2

Query: 292 MDYETKTKTVLSPTPSYSLMLYHHVLSKFSNF-------SYQERPYHHHTNAWH--LQEV 140
           MDY+       +P  S  L+ Y + LSK             ++  +  H   W   L EV
Sbjct: 1   MDYDK------APASSAPLLCYANNLSKSKESINKDLLGQEEDSQFSQHQLTWRPTLSEV 54

Query: 139 FEEIKLLYSIAFPLILTGIILYGKGLISMMFLGRLGKDILAGGSLS 2
           FEEIK LYSIA P+I+TG+++YGK  ISM+F+GRLGK+ LAGGSLS
Sbjct: 55  FEEIKQLYSIALPMIITGLLIYGKSAISMLFMGRLGKEALAGGSLS 100


>emb|CBI21435.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 48/106 (45%), Positives = 63/106 (59%), Gaps = 9/106 (8%)
 Frame = -2

Query: 292 MDYETKTKTVLSPTPSYSLMLYHHVLSKFSNF-------SYQERPYHHHTNAWH--LQEV 140
           MDY+       +P  S  L+ Y + LSK             ++  +  H   W   L EV
Sbjct: 1   MDYDK------APASSAPLLCYANNLSKSKESINKDLLGQEEDSQFSQHQLTWRPTLSEV 54

Query: 139 FEEIKLLYSIAFPLILTGIILYGKGLISMMFLGRLGKDILAGGSLS 2
           FEEIK LYSIA P+I+TG+++YGK  ISM+F+GRLGK+ LAGGSLS
Sbjct: 55  FEEIKQLYSIALPMIITGLLIYGKSAISMLFMGRLGKEALAGGSLS 100


>ref|XP_002523569.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223537131|gb|EEF38764.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 520

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/63 (53%), Positives = 47/63 (74%)
 Frame = -2

Query: 190 QERPYHHHTNAWHLQEVFEEIKLLYSIAFPLILTGIILYGKGLISMMFLGRLGKDILAGG 11
           Q+  Y H      L +  +EIK LY+IAFP+I+TG+++YGK +ISM F+G+LGK+ LAGG
Sbjct: 34  QDSLYCHQAWRPSLSQAVDEIKQLYTIAFPMIITGLLIYGKSVISMFFMGKLGKETLAGG 93

Query: 10  SLS 2
           SLS
Sbjct: 94  SLS 96


>ref|XP_002310147.1| predicted protein [Populus trichocarpa] gi|222853050|gb|EEE90597.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/44 (65%), Positives = 40/44 (90%)
 Frame = -2

Query: 133 EIKLLYSIAFPLILTGIILYGKGLISMMFLGRLGKDILAGGSLS 2
           EIK L +IAFP+I+TG+++YGK  ISM+F+G+LGK++LAGGSLS
Sbjct: 1   EIKELCTIAFPMIITGLLIYGKSAISMLFMGKLGKEVLAGGSLS 44


>ref|XP_002509706.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223549605|gb|EEF51093.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 539

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/51 (56%), Positives = 40/51 (78%)
 Frame = -2

Query: 154 HLQEVFEEIKLLYSIAFPLILTGIILYGKGLISMMFLGRLGKDILAGGSLS 2
           HL    +E K + +IAFP+ILTG++LY + +ISM+FLGRLG+  LAGGSL+
Sbjct: 53  HLSLAIKEAKCIANIAFPMILTGLLLYSRSMISMLFLGRLGELALAGGSLA 103


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