BLASTX nr result
ID: Cimicifuga21_contig00011460
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00011460
(1507 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation... 673 0.0
emb|CAN81874.1| hypothetical protein VITISV_038366 [Vitis vinifera] 655 0.0
ref|XP_004159873.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t... 628 e-177
ref|XP_004146257.1| PREDICTED: eukaryotic translation initiation... 628 e-177
emb|CBI29961.3| unnamed protein product [Vitis vinifera] 617 e-174
>ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
[Vitis vinifera]
Length = 946
Score = 673 bits (1736), Expect = 0.0
Identities = 345/506 (68%), Positives = 393/506 (77%), Gaps = 5/506 (0%)
Frame = +3
Query: 3 PQEVYDAMRNLVXXXXXXXXXXXXXNDAHQAVENNKSPPAFVVTPELVPRRPTFPGNCRT 182
PQEVYDAM+NL + + VE ++ PPAFVVTPE+VPR+PTFP N RT
Sbjct: 441 PQEVYDAMKNLAEQTEDTENGESEAGEEPR-VEESRGPPAFVVTPEVVPRKPTFPENSRT 499
Query: 183 FMDELISLIYKYGDEKTKARAMLCDIYHHALMDRFSDSRDLLLMSHLQDGIQHMKIPIQI 362
MD L+SLIY +GDE+TKARAMLCDIYHHA++D FS +RDLLLMSHLQD +QHM I QI
Sbjct: 500 LMDILVSLIYNHGDERTKARAMLCDIYHHAILDEFSTARDLLLMSHLQDNVQHMDISTQI 559
Query: 363 LFNRAMAQLGLCAFRAGLVEEAHSCLSELHAGGRVKELLAQGVSQSRYHEKTPEQEKLER 542
LFNRAMAQLGLCAFR GL+ E H CLSEL++GGRVKELLAQGVSQSRYHEKTPEQE++ER
Sbjct: 560 LFNRAMAQLGLCAFRVGLIAEGHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERIER 619
Query: 543 RRQMPYHMHINLELLEAVHLTCAMLLEVPNMAANTHDAKHKVISKPFRRFLEVSERQTFI 722
RRQMPYHMHINLELLE VHL CAMLLEVPNMAANTHDAK KVISK FRR LEVSERQTF
Sbjct: 620 RRQMPYHMHINLELLEGVHLICAMLLEVPNMAANTHDAKRKVISKTFRRLLEVSERQTFT 679
Query: 723 GPPENVRDHVMAATRALSKGDFQKSFEVIRSLDAWKLLRNSDNVLEMLKTKIKEEALRTY 902
GPPENVRDHVMAATRALSKGDFQK+F+VI+SLD WKLLRN ++VLEML+ KIKEEALRTY
Sbjct: 680 GPPENVRDHVMAATRALSKGDFQKAFDVIKSLDFWKLLRNREDVLEMLRAKIKEEALRTY 739
Query: 903 LFNYSYRYDSLSLDQLTTMFDFSEAQIHNIVSKMMIMKELHASWDKPTRCIVFHNVEHTK 1082
LF YS Y++LSLDQLT MFD SE H+I+SKMM+M+ELHASWD+PTRCIVFH+VEHT+
Sbjct: 740 LFTYSLSYNTLSLDQLTKMFDLSETLTHSIISKMMVMEELHASWDQPTRCIVFHDVEHTR 799
Query: 1083 LQVLASQLIEKLLILAESNEKAFESKTGGGLNGIPTRRMEGQDNAGASAXXXXXXXXXXX 1262
LQ L+ QL +KL ILAE+NE+A+E+K GGG +P RR +GQD AGA++
Sbjct: 800 LQALSFQLTDKLTILAENNERAYEAKIGGGGLDLPLRRRDGQDYAGAAS---VGGKWQDN 856
Query: 1263 XXXXXXXXXXXXXXFLASGQVPGGGS-----YRNRAGQSRGTGDYSSGYQSTRYAYRGVG 1427
+ G+ G GS R+R GQSRGTG YS GYQSTRY G
Sbjct: 857 FSFSQGRQGGVRTGYGVGGRPLGPGSSAGTFSRDRGGQSRGTGGYSGGYQSTRYQDAAYG 916
Query: 1428 RTPYQTGSTVRGSQMDGSGRMVNLNR 1505
RT YQT S VRGSQMD S RMV+LNR
Sbjct: 917 RTAYQTSSAVRGSQMDTSTRMVSLNR 942
>emb|CAN81874.1| hypothetical protein VITISV_038366 [Vitis vinifera]
Length = 1047
Score = 655 bits (1690), Expect = 0.0
Identities = 341/516 (66%), Positives = 388/516 (75%), Gaps = 20/516 (3%)
Frame = +3
Query: 3 PQEVYDAMRNLVXXXXXXXXXXXXXNDAHQAVENNKSPPAFVVTPELVPRRPTFPGNCRT 182
PQEVYDAM+NL + + VE ++ PPAFVVTPE+VPR+PTFP N RT
Sbjct: 425 PQEVYDAMKNLAEQTEDTENGESEAGEEPR-VEESRGPPAFVVTPEVVPRKPTFPENSRT 483
Query: 183 FMDELISLIYKYGDEKTKARAMLCDIYHHALMDRFSDSRDLLLMSHLQDGIQHMKIPIQI 362
MD L+SLIY +GDE+TKARAMLCDIYHHA++D FS +RDLLLMSHLQD +QHM I QI
Sbjct: 484 LMDILVSLIYNHGDERTKARAMLCDIYHHAILDEFSTARDLLLMSHLQDNVQHMDISTQI 543
Query: 363 LFNRAMAQLGLCAFRAGLVEEAHSCLSELHAGGRVKELLAQGVSQSRYHEKTPEQ----- 527
LFNRAMAQLGLCAFR GL+ E H CLSEL++GGRVKELLAQGVSQSRYHEKTPEQ
Sbjct: 544 LFNRAMAQLGLCAFRVGLIAEGHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQLCGKK 603
Query: 528 ----------EKLERRRQMPYHMHINLELLEAVHLTCAMLLEVPNMAANTHDAKHKVISK 677
E++ERRRQMPYHMHINLELLE VHL CAMLLEVPNMAANTHDAK KVISK
Sbjct: 604 ELDMFLAALVERIERRRQMPYHMHINLELLEGVHLICAMLLEVPNMAANTHDAKRKVISK 663
Query: 678 PFRRFLEVSERQTFIGPPENVRDHVMAATRALSKGDFQKSFEVIRSLDAWKLLRNSDNVL 857
FRR LEVSERQTF GPPENVRDHVMAATRALSKGDFQK+F+VI+SLD WKLLRN ++VL
Sbjct: 664 TFRRLLEVSERQTFTGPPENVRDHVMAATRALSKGDFQKAFDVIKSLDFWKLLRNREDVL 723
Query: 858 EMLKTKIKEEALRTYLFNYSYRYDSLSLDQLTTMFDFSEAQIHNIVSKMMIMKELHASWD 1037
EML+ KIKEEALRTYLF YS Y++LSLDQLT MFD SE H+I+SKMM+M+ELHASWD
Sbjct: 724 EMLRAKIKEEALRTYLFTYSLSYNTLSLDQLTKMFDLSETLTHSIISKMMVMEELHASWD 783
Query: 1038 KPTRCIVFHNVEHTKLQVLASQLIEKLLILAESNEKAFESKTGGGLNGIPTRRMEGQDNA 1217
+PTRCIVFH+VEHT+LQ L+ QL +KL ILAE+NE+A+E+K GGG +P RR +GQD A
Sbjct: 784 QPTRCIVFHDVEHTRLQALSFQLTDKLTILAENNERAYEAKIGGGGLDLPLRRRDGQDYA 843
Query: 1218 GASAXXXXXXXXXXXXXXXXXXXXXXXXXFLASGQVPGGGS-----YRNRAGQSRGTGDY 1382
GA++ + G+ G GS R+R GQSRGTG Y
Sbjct: 844 GAAS---VGGKWQDNFSFSQGRQGGVRTGYGVGGRPLGPGSSAGTFSRDRGGQSRGTGGY 900
Query: 1383 SSGYQSTRYAYRGVGRTPYQTGSTVRGSQMDGSGRM 1490
S GYQSTRY GRT YQT S VRGSQMD S RM
Sbjct: 901 SGGYQSTRYQDAAYGRTAYQTSSAVRGSQMDTSTRM 936
>ref|XP_004159873.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
factor 3 subunit C-like [Cucumis sativus]
Length = 939
Score = 628 bits (1620), Expect = e-177
Identities = 334/506 (66%), Positives = 383/506 (75%), Gaps = 5/506 (0%)
Frame = +3
Query: 3 PQEVYDAMRNLVXXXXXXXXXXXXXNDAHQAVENNKSPPAFVVTPELVPRRPTFPGNCRT 182
PQEVYDAMR L +D + VE ++ P AF+VTPELVPR+PTFP + R
Sbjct: 438 PQEVYDAMRKLAELSEDDGGDA---SDEAKVVEESRGPAAFIVTPELVPRKPTFPESSRA 494
Query: 183 FMDELISLIYKYGDEKTKARAMLCDIYHHALMDRFSDSRDLLLMSHLQDGIQHMKIPIQI 362
FMD L++LIY+YGDE+TKARAMLCDIYHHAL+D F SRDLLLMSHLQD IQH+ I QI
Sbjct: 495 FMDILVTLIYQYGDERTKARAMLCDIYHHALLDEFYISRDLLLMSHLQDSIQHLDISTQI 554
Query: 363 LFNRAMAQLGLCAFRAGLVEEAHSCLSELHAGGRVKELLAQGVSQSRYHEKTPEQEKLER 542
LFNRAMAQLGLC FR GL+ E H C+SEL++GGRVKELLAQGVSQSRYHEKTPEQE+LER
Sbjct: 555 LFNRAMAQLGLCGFRVGLISEGHGCVSELYSGGRVKELLAQGVSQSRYHEKTPEQERLER 614
Query: 543 RRQMPYHMHINLELLEAVHLTCAMLLEVPNMAANTHDAKHKVISKPFRRFLEVSERQTFI 722
RRQMPYHMHINLELLEAVHL AMLLEVPNMA N HD+K KVISK FRR LEVSERQTF
Sbjct: 615 RRQMPYHMHINLELLEAVHLISAMLLEVPNMAGNVHDSKRKVISKNFRRLLEVSERQTFT 674
Query: 723 GPPENVRDHVMAATRALSKGDFQKSFEVIRSLDAWKLLRNSDNVLEMLKTKIKEEALRTY 902
GPPENVRDHVMAATRAL KGDFQK+++VI SLD WKLLR + VLEM+K KIKEEALRTY
Sbjct: 675 GPPENVRDHVMAATRALRKGDFQKAYDVIASLDVWKLLRRCNEVLEMVKGKIKEEALRTY 734
Query: 903 LFNYSYRYDSLSLDQLTTMFDFSEAQIHNIVSKMMIMKELHASWDKPTRCIVFHNVEHTK 1082
L YS YDSLS DQLT MFD +E Q H+IVSKMMI +ELHASWD+P+ CI+FH+V HT+
Sbjct: 735 LLTYSSSYDSLSSDQLTQMFDLAEGQTHSIVSKMMINEELHASWDQPSGCIIFHDVTHTR 794
Query: 1083 LQVLASQLIEKLLILAESNEKAFESKTGGGLNGIPTRRMEGQD-NAGASAXXXXXXXXXX 1259
LQ LA QL +KL ILAESNE+A E++ GGGL+ +P RR + Q+ AG +A
Sbjct: 795 LQGLAFQLADKLSILAESNERAVEARIGGGLD-LPMRRRDNQEYGAGGAAGGSSRWPDNM 853
Query: 1260 XXXXXXXXXXXXXXXFLAS--GQVPGGGSYRNRAGQSRGTGDYSSGYQSTRY--AYRGVG 1427
+ + GQ GGG YR+R GQSRG +SGYQSTRY A G G
Sbjct: 854 SYNQGRQGGPSSRAGYSSGGRGQGGGGGYYRDRMGQSRGG---NSGYQSTRYQDAAYGSG 910
Query: 1428 RTPYQTGSTVRGSQMDGSGRMVNLNR 1505
RT YQ+GS+ RGSQMD S RMV+LN+
Sbjct: 911 RTAYQSGSS-RGSQMDASARMVSLNK 935
>ref|XP_004146257.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
[Cucumis sativus]
Length = 939
Score = 628 bits (1620), Expect = e-177
Identities = 334/506 (66%), Positives = 383/506 (75%), Gaps = 5/506 (0%)
Frame = +3
Query: 3 PQEVYDAMRNLVXXXXXXXXXXXXXNDAHQAVENNKSPPAFVVTPELVPRRPTFPGNCRT 182
PQEVYDAMR L +D + VE ++ P AF+VTPELVPR+PTFP + R
Sbjct: 438 PQEVYDAMRKLAELSEDDGGDA---SDEAKVVEESRGPAAFIVTPELVPRKPTFPESSRA 494
Query: 183 FMDELISLIYKYGDEKTKARAMLCDIYHHALMDRFSDSRDLLLMSHLQDGIQHMKIPIQI 362
FMD L++LIY+YGDE+TKARAMLCDIYHHAL+D F SRDLLLMSHLQD IQH+ I QI
Sbjct: 495 FMDILVTLIYQYGDERTKARAMLCDIYHHALLDEFYISRDLLLMSHLQDSIQHLDISTQI 554
Query: 363 LFNRAMAQLGLCAFRAGLVEEAHSCLSELHAGGRVKELLAQGVSQSRYHEKTPEQEKLER 542
LFNRAMAQLGLC FR GL+ E H C+SEL++GGRVKELLAQGVSQSRYHEKTPEQE+LER
Sbjct: 555 LFNRAMAQLGLCGFRVGLISEGHGCVSELYSGGRVKELLAQGVSQSRYHEKTPEQERLER 614
Query: 543 RRQMPYHMHINLELLEAVHLTCAMLLEVPNMAANTHDAKHKVISKPFRRFLEVSERQTFI 722
RRQMPYHMHINLELLEAVHL AMLLEVPNMA N HD+K KVISK FRR LEVSERQTF
Sbjct: 615 RRQMPYHMHINLELLEAVHLISAMLLEVPNMAGNVHDSKRKVISKNFRRLLEVSERQTFT 674
Query: 723 GPPENVRDHVMAATRALSKGDFQKSFEVIRSLDAWKLLRNSDNVLEMLKTKIKEEALRTY 902
GPPENVRDHVMAATRAL KGDFQK+++VI SLD WKLLR + VLEM+K KIKEEALRTY
Sbjct: 675 GPPENVRDHVMAATRALRKGDFQKAYDVIASLDVWKLLRRCNEVLEMVKGKIKEEALRTY 734
Query: 903 LFNYSYRYDSLSLDQLTTMFDFSEAQIHNIVSKMMIMKELHASWDKPTRCIVFHNVEHTK 1082
L YS YDSLS DQLT MFD +E Q H+IVSKMMI +ELHASWD+P+ CI+FH+V HT+
Sbjct: 735 LLTYSSSYDSLSSDQLTQMFDLAEGQTHSIVSKMMINEELHASWDQPSGCIIFHDVTHTR 794
Query: 1083 LQVLASQLIEKLLILAESNEKAFESKTGGGLNGIPTRRMEGQD-NAGASAXXXXXXXXXX 1259
LQ LA QL +KL ILAESNE+A E++ GGGL+ +P RR + Q+ AG +A
Sbjct: 795 LQGLAFQLADKLSILAESNERAVEARIGGGLD-LPMRRRDNQEYGAGGAAGGSSRWPDNM 853
Query: 1260 XXXXXXXXXXXXXXXFLAS--GQVPGGGSYRNRAGQSRGTGDYSSGYQSTRY--AYRGVG 1427
+ + GQ GGG YR+R GQSRG +SGYQSTRY A G G
Sbjct: 854 SYNQGRQGGPSSRAGYSSGGRGQGGGGGYYRDRMGQSRGG---NSGYQSTRYQDAAYGSG 910
Query: 1428 RTPYQTGSTVRGSQMDGSGRMVNLNR 1505
RT YQ+GS+ RGSQMD S RMV+LN+
Sbjct: 911 RTAYQSGSS-RGSQMDASARMVSLNK 935
>emb|CBI29961.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 617 bits (1592), Expect = e-174
Identities = 314/447 (70%), Positives = 353/447 (78%)
Frame = +3
Query: 165 PGNCRTFMDELISLIYKYGDEKTKARAMLCDIYHHALMDRFSDSRDLLLMSHLQDGIQHM 344
P N RT MD L+SLIY +GDE+TKARAMLCDIYHHA++D FS +RDLLLMSHLQD +QHM
Sbjct: 414 PRNSRTLMDILVSLIYNHGDERTKARAMLCDIYHHAILDEFSTARDLLLMSHLQDNVQHM 473
Query: 345 KIPIQILFNRAMAQLGLCAFRAGLVEEAHSCLSELHAGGRVKELLAQGVSQSRYHEKTPE 524
I QILFNRAMAQLGLCAFR GL+ E H CLSEL++GGRVKELLAQGVSQSRYHEKTPE
Sbjct: 474 DISTQILFNRAMAQLGLCAFRVGLIAEGHGCLSELYSGGRVKELLAQGVSQSRYHEKTPE 533
Query: 525 QEKLERRRQMPYHMHINLELLEAVHLTCAMLLEVPNMAANTHDAKHKVISKPFRRFLEVS 704
QE++ERRRQMPYHMHINLELLE VHL CAMLLEVPNMAANTHDAK KVISK FRR LEVS
Sbjct: 534 QERIERRRQMPYHMHINLELLEGVHLICAMLLEVPNMAANTHDAKRKVISKTFRRLLEVS 593
Query: 705 ERQTFIGPPENVRDHVMAATRALSKGDFQKSFEVIRSLDAWKLLRNSDNVLEMLKTKIKE 884
ERQTF GPPENVRDHVMAATRALSKGDFQK+F+VI+SLD WKLLRN ++VLEML+ KIKE
Sbjct: 594 ERQTFTGPPENVRDHVMAATRALSKGDFQKAFDVIKSLDFWKLLRNREDVLEMLRAKIKE 653
Query: 885 EALRTYLFNYSYRYDSLSLDQLTTMFDFSEAQIHNIVSKMMIMKELHASWDKPTRCIVFH 1064
EALRTYLF YS Y++LSLDQLT MFD SE H+I+SKMM+M+ELHASWD+PTRCIVFH
Sbjct: 654 EALRTYLFTYSLSYNTLSLDQLTKMFDLSETLTHSIISKMMVMEELHASWDQPTRCIVFH 713
Query: 1065 NVEHTKLQVLASQLIEKLLILAESNEKAFESKTGGGLNGIPTRRMEGQDNAGASAXXXXX 1244
+VEHT+LQ L+ QL +KL ILAE+NE+A+E+K GGG +P RR +GQD AGA++
Sbjct: 714 DVEHTRLQALSFQLTDKLTILAENNERAYEAKIGGGGLDLPLRRRDGQDYAGAASVG--- 770
Query: 1245 XXXXXXXXXXXXXXXXXXXXFLASGQVPGGGSYRNRAGQSRGTGDYSSGYQSTRYAYRGV 1424
Q S + GQSRGTG YS GYQSTRY
Sbjct: 771 ----------------------GKWQDNFSFSQGRQGGQSRGTGGYSGGYQSTRYQDAAY 808
Query: 1425 GRTPYQTGSTVRGSQMDGSGRMVNLNR 1505
GRT YQT S VRGSQMD S RMV+LNR
Sbjct: 809 GRTAYQTSSAVRGSQMDTSTRMVSLNR 835