BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011458
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270185.1| PREDICTED: high mobility group B protein 1 i...   163   6e-38
ref|XP_002269398.1| PREDICTED: high mobility group B protein 1 i...   163   6e-38
ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-l...   157   5e-36
ref|XP_002528104.1| DNA-binding protein MNB1B, putative [Ricinus...   149   1e-33
ref|XP_003633441.1| PREDICTED: high mobility group B protein 1 [...   149   1e-33

>ref|XP_002270185.1| PREDICTED: high mobility group B protein 1 isoform 2 [Vitis
           vinifera]
          Length = 156

 Score =  163 bits (413), Expect = 6e-38
 Identities = 83/143 (58%), Positives = 99/143 (69%), Gaps = 1/143 (0%)
 Frame = +1

Query: 196 MRPSKGRSAAKKDKKEALKPVDDRKMGKRKVAVXXXXXXXXXXXXXXXXXX-PNKPKRPA 372
           M+ +KG++AA+KDKKEALKPV+DR++GKRK A+                   PNKPKRP 
Sbjct: 1   MKVTKGKAAARKDKKEALKPVEDRRLGKRKAALKADKSTKKLAKKEKLAKKDPNKPKRPP 60

Query: 373 SAFFVFMEEFRKTYKKEHPXXXXXXXXXXXXXXXWKSMSSADKAPYEAKAQKRKIEYEKL 552
           SAFFVF+EEFRK YK+EHP               WKS+S ADKAPYEAKA KRK +YEKL
Sbjct: 61  SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAAKRKSDYEKL 120

Query: 553 MSTYNKKQESKVDDNDEESDRSK 621
           M+ YNKKQES  DD++EESDRSK
Sbjct: 121 MAAYNKKQESMADDDEEESDRSK 143


>ref|XP_002269398.1| PREDICTED: high mobility group B protein 1 isoform 1 [Vitis
           vinifera] gi|147854340|emb|CAN83423.1| hypothetical
           protein VITISV_023376 [Vitis vinifera]
          Length = 166

 Score =  163 bits (413), Expect = 6e-38
 Identities = 83/143 (58%), Positives = 99/143 (69%), Gaps = 1/143 (0%)
 Frame = +1

Query: 196 MRPSKGRSAAKKDKKEALKPVDDRKMGKRKVAVXXXXXXXXXXXXXXXXXX-PNKPKRPA 372
           M+ +KG++AA+KDKKEALKPV+DR++GKRK A+                   PNKPKRP 
Sbjct: 1   MKVTKGKAAARKDKKEALKPVEDRRLGKRKAALKADKSTKKLAKKEKLAKKDPNKPKRPP 60

Query: 373 SAFFVFMEEFRKTYKKEHPXXXXXXXXXXXXXXXWKSMSSADKAPYEAKAQKRKIEYEKL 552
           SAFFVF+EEFRK YK+EHP               WKS+S ADKAPYEAKA KRK +YEKL
Sbjct: 61  SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAAKRKSDYEKL 120

Query: 553 MSTYNKKQESKVDDNDEESDRSK 621
           M+ YNKKQES  DD++EESDRSK
Sbjct: 121 MAAYNKKQESMADDDEEESDRSK 143


>ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-like [Vitis vinifera]
           gi|147815135|emb|CAN74566.1| hypothetical protein
           VITISV_023651 [Vitis vinifera]
           gi|297740214|emb|CBI30396.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score =  157 bits (396), Expect = 5e-36
 Identities = 80/143 (55%), Positives = 95/143 (66%), Gaps = 1/143 (0%)
 Frame = +1

Query: 196 MRPSKGRSAAKKDKKEALKPVDDRKMGKRKVAVXXXXXXXXXXXXXXXXXX-PNKPKRPA 372
           M+ +KG+ AA++D KEALKP +DRK+GKRK AV                   PNKPKRP 
Sbjct: 1   MKAAKGKGAARRDTKEALKPAEDRKIGKRKAAVKAEKSSKRATTKDKKAKKDPNKPKRPP 60

Query: 373 SAFFVFMEEFRKTYKKEHPXXXXXXXXXXXXXXXWKSMSSADKAPYEAKAQKRKIEYEKL 552
           SAFFVF+EEFRK +KKE+P               WKS+S A+KAPYEAKA K+K EYEK+
Sbjct: 61  SAFFVFLEEFRKVFKKENPNVKAVSAVGKAGGERWKSLSEAEKAPYEAKAAKKKAEYEKI 120

Query: 553 MSTYNKKQESKVDDNDEESDRSK 621
           M+ YNKKQES  DD DEESDRSK
Sbjct: 121 MNAYNKKQESTADDGDEESDRSK 143


>ref|XP_002528104.1| DNA-binding protein MNB1B, putative [Ricinus communis]
           gi|223532493|gb|EEF34283.1| DNA-binding protein MNB1B,
           putative [Ricinus communis]
          Length = 171

 Score =  149 bits (376), Expect = 1e-33
 Identities = 82/143 (57%), Positives = 92/143 (64%), Gaps = 1/143 (0%)
 Frame = +1

Query: 196 MRPSKGRSAAKKDKKEALKPVDDRKMGKRKVAVXXXXXXXXXXXXXXXXXX-PNKPKRPA 372
           M+ SKG  AAK  K +ALKP DDRK+GKRK A                    PNKPKRP 
Sbjct: 1   MKNSKGTGAAKASK-DALKPADDRKVGKRKAAAAVDRSSKLKAKREKKAKKDPNKPKRPP 59

Query: 373 SAFFVFMEEFRKTYKKEHPXXXXXXXXXXXXXXXWKSMSSADKAPYEAKAQKRKIEYEKL 552
           SAFFVF+EEFRKT+KKE+P               WKSMSSA+KAPYEAKA K+K EY KL
Sbjct: 60  SAFFVFLEEFRKTFKKENPSVTSVAAVGKAGGAKWKSMSSAEKAPYEAKAAKKKDEYGKL 119

Query: 553 MSTYNKKQESKVDDNDEESDRSK 621
           M+ YNKKQES  DD +EESDRSK
Sbjct: 120 MNAYNKKQESTADDGEEESDRSK 142


>ref|XP_003633441.1| PREDICTED: high mobility group B protein 1 [Vitis vinifera]
          Length = 151

 Score =  149 bits (375), Expect = 1e-33
 Identities = 80/143 (55%), Positives = 95/143 (66%), Gaps = 1/143 (0%)
 Frame = +1

Query: 196 MRPSKGRSAAKKDKKEALKPVDDRKMGKRKVAVXXXXXXXXXXXXXXXXXX-PNKPKRPA 372
           M+ +KG++AA+KDKKEALKPV+DR++GKRK A+                   PNKPKRP 
Sbjct: 1   MKVTKGKAAARKDKKEALKPVEDRRLGKRKAALKADKSTKKLAKKEKLAKKDPNKPKRPP 60

Query: 373 SAFFVFMEEFRKTYKKEHPXXXXXXXXXXXXXXXWKSMSSADKAPYEAKAQKRKIEYEKL 552
           SAFFVF+EEFRK YK+EHP                    SADKAPYEAKA KRK +YEKL
Sbjct: 61  SAFFVFLEEFRKVYKQEHPNVKAV---------------SADKAPYEAKAAKRKSDYEKL 105

Query: 553 MSTYNKKQESKVDDNDEESDRSK 621
           M+ YNKKQES  DD++EESDRSK
Sbjct: 106 MAAYNKKQESMADDDEEESDRSK 128