BLASTX nr result

ID: Cimicifuga21_contig00011457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011457
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531075.1| PREDICTED: tubulin beta-1 chain-like [Glycin...   170   1e-40
ref|XP_003524784.1| PREDICTED: tubulin beta-1 chain-like [Glycin...   170   1e-40
dbj|BAH82659.1| tubulin beta chain [Lotus japonicus]                  170   1e-40
ref|XP_002307727.1| tubulin, beta chain [Populus trichocarpa] gi...   169   2e-40
gb|ABY86656.1| beta-tubulin 8 [Gossypium hirsutum]                    169   2e-40

>ref|XP_003531075.1| PREDICTED: tubulin beta-1 chain-like [Glycine max]
          Length = 443

 Score =  170 bits (430), Expect = 1e-40
 Identities = 81/81 (100%), Positives = 81/81 (100%)
 Frame = +1

Query: 1   QMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFIGNSTSIQEMFRRVSEQFTAM 180
           QMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFIGNSTSIQEMFRRVSEQFTAM
Sbjct: 329 QMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFIGNSTSIQEMFRRVSEQFTAM 388

Query: 181 FRRKAFLHWYTGEGMDEMEFT 243
           FRRKAFLHWYTGEGMDEMEFT
Sbjct: 389 FRRKAFLHWYTGEGMDEMEFT 409


>ref|XP_003524784.1| PREDICTED: tubulin beta-1 chain-like [Glycine max]
          Length = 442

 Score =  170 bits (430), Expect = 1e-40
 Identities = 81/81 (100%), Positives = 81/81 (100%)
 Frame = +1

Query: 1   QMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFIGNSTSIQEMFRRVSEQFTAM 180
           QMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFIGNSTSIQEMFRRVSEQFTAM
Sbjct: 329 QMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFIGNSTSIQEMFRRVSEQFTAM 388

Query: 181 FRRKAFLHWYTGEGMDEMEFT 243
           FRRKAFLHWYTGEGMDEMEFT
Sbjct: 389 FRRKAFLHWYTGEGMDEMEFT 409


>dbj|BAH82659.1| tubulin beta chain [Lotus japonicus]
          Length = 446

 Score =  170 bits (430), Expect = 1e-40
 Identities = 81/81 (100%), Positives = 81/81 (100%)
 Frame = +1

Query: 1   QMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFIGNSTSIQEMFRRVSEQFTAM 180
           QMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFIGNSTSIQEMFRRVSEQFTAM
Sbjct: 329 QMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFIGNSTSIQEMFRRVSEQFTAM 388

Query: 181 FRRKAFLHWYTGEGMDEMEFT 243
           FRRKAFLHWYTGEGMDEMEFT
Sbjct: 389 FRRKAFLHWYTGEGMDEMEFT 409


>ref|XP_002307727.1| tubulin, beta chain [Populus trichocarpa]
           gi|222857176|gb|EEE94723.1| tubulin, beta chain [Populus
           trichocarpa]
          Length = 449

 Score =  169 bits (429), Expect = 2e-40
 Identities = 80/81 (98%), Positives = 81/81 (100%)
 Frame = +1

Query: 1   QMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFIGNSTSIQEMFRRVSEQFTAM 180
           QMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTF+GNSTSIQEMFRRVSEQFTAM
Sbjct: 332 QMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFVGNSTSIQEMFRRVSEQFTAM 391

Query: 181 FRRKAFLHWYTGEGMDEMEFT 243
           FRRKAFLHWYTGEGMDEMEFT
Sbjct: 392 FRRKAFLHWYTGEGMDEMEFT 412


>gb|ABY86656.1| beta-tubulin 8 [Gossypium hirsutum]
          Length = 449

 Score =  169 bits (429), Expect = 2e-40
 Identities = 80/81 (98%), Positives = 81/81 (100%)
 Frame = +1

Query: 1   QMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFIGNSTSIQEMFRRVSEQFTAM 180
           QMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTF+GNSTSIQEMFRRVSEQFTAM
Sbjct: 333 QMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFVGNSTSIQEMFRRVSEQFTAM 392

Query: 181 FRRKAFLHWYTGEGMDEMEFT 243
           FRRKAFLHWYTGEGMDEMEFT
Sbjct: 393 FRRKAFLHWYTGEGMDEMEFT 413


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