BLASTX nr result

ID: Cimicifuga21_contig00011453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011453
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69328.1| hypothetical protein VITISV_020279 [Vitis vinifera]   209   5e-52
ref|XP_002281687.1| PREDICTED: protein argonaute PNH1 [Vitis vin...   208   1e-51
emb|CBI28138.3| unnamed protein product [Vitis vinifera]              178   9e-43
ref|XP_003524004.1| PREDICTED: protein argonaute PNH1-like [Glyc...   170   3e-40
ref|XP_002517060.1| eukaryotic translation initiation factor 2c,...   165   8e-39

>emb|CAN69328.1| hypothetical protein VITISV_020279 [Vitis vinifera]
          Length = 1021

 Score =  209 bits (532), Expect = 5e-52
 Identities = 108/203 (53%), Positives = 144/203 (70%), Gaps = 4/203 (1%)
 Frame = +1

Query: 124 SKMPQIQMKDPQEKHVVS-RKPLQNSMNQQKP---LQTCLVSLQDTXXXXXXXXXXXXXX 291
           ++M  +QMK+P++KHV+S RKPLQNSMNQQ     + +   SL++               
Sbjct: 60  AQMTHMQMKNPEQKHVISTRKPLQNSMNQQTSSEIMPSTEESLENAKRSIGRRKGRRRGK 119

Query: 292 XSQVESLKETKVDLQLEPLVSSKGLTFHRRPGYGRAGTKCIVKANHFLVELSANDLNHYH 471
            ++VE L++ K+DL +    SSKGL FHRRPGYG+ G KC+VKANHFL ++   DL+ Y 
Sbjct: 120 GAKVEQLQDPKLDLSVGSHDSSKGLVFHRRPGYGQLGRKCVVKANHFLAQVPDTDLSQYS 179

Query: 472 VMITPEPKASLLKCNRAVMAQLVKLYRESDLGMRLPAYDGRNSLYTAGLLPFTSKEFSIT 651
           V ITPE   +  K N+++MAQLVKL+R++DLGMRLP YDG+  LYTAGLLPF SKEF++ 
Sbjct: 180 VTITPE--VASXKINKSIMAQLVKLHRDTDLGMRLPVYDGKRVLYTAGLLPFVSKEFTVK 237

Query: 652 LVDEDDGTGIARHRDFKVVIKFV 720
           LV+ED+GTGI + R+FKV IKFV
Sbjct: 238 LVEEDEGTGITKEREFKVTIKFV 260


>ref|XP_002281687.1| PREDICTED: protein argonaute PNH1 [Vitis vinifera]
          Length = 938

 Score =  208 bits (529), Expect = 1e-51
 Identities = 108/201 (53%), Positives = 142/201 (70%), Gaps = 4/201 (1%)
 Frame = +1

Query: 130 MPQIQMKDPQEKHVVS-RKPLQNSMNQQKP---LQTCLVSLQDTXXXXXXXXXXXXXXXS 297
           M  +QMK+P++KHV+S RKPLQNSMNQQ     + +   SL++                +
Sbjct: 1   MTHMQMKNPEQKHVISTRKPLQNSMNQQTSSEIMPSTEESLENAKRSIGRRKGRRRGKGA 60

Query: 298 QVESLKETKVDLQLEPLVSSKGLTFHRRPGYGRAGTKCIVKANHFLVELSANDLNHYHVM 477
           +VE L++ K+DL +    SSKGL FHRRPGYG+ G KC+VKANHFL ++   DL+ Y V 
Sbjct: 61  KVEQLQDPKLDLSVGSHDSSKGLVFHRRPGYGQLGRKCVVKANHFLAQVPDTDLSQYSVT 120

Query: 478 ITPEPKASLLKCNRAVMAQLVKLYRESDLGMRLPAYDGRNSLYTAGLLPFTSKEFSITLV 657
           ITPE  +   K N+++MAQLVKL+R++DLGMRLP YDG+  LYTAGLLPF SKEF++ LV
Sbjct: 121 ITPEVASR--KINKSIMAQLVKLHRDTDLGMRLPVYDGKRVLYTAGLLPFVSKEFTVKLV 178

Query: 658 DEDDGTGIARHRDFKVVIKFV 720
           +ED+GTGI + R+FKV IKFV
Sbjct: 179 EEDEGTGITKEREFKVTIKFV 199


>emb|CBI28138.3| unnamed protein product [Vitis vinifera]
          Length = 905

 Score =  178 bits (452), Expect = 9e-43
 Identities = 86/142 (60%), Positives = 111/142 (78%)
 Frame = +1

Query: 295 SQVESLKETKVDLQLEPLVSSKGLTFHRRPGYGRAGTKCIVKANHFLVELSANDLNHYHV 474
           ++VE L++ K+DL +    SSKGL FHRRPGYG+ G KC+VKANHFL ++   DL+ Y V
Sbjct: 27  AKVEQLQDPKLDLSVGSHDSSKGLVFHRRPGYGQLGRKCVVKANHFLAQVPDTDLSQYSV 86

Query: 475 MITPEPKASLLKCNRAVMAQLVKLYRESDLGMRLPAYDGRNSLYTAGLLPFTSKEFSITL 654
            ITPE  +   K N+++MAQLVKL+R++DLGMRLP YDG+  LYTAGLLPF SKEF++ L
Sbjct: 87  TITPEVASR--KINKSIMAQLVKLHRDTDLGMRLPVYDGKRVLYTAGLLPFVSKEFTVKL 144

Query: 655 VDEDDGTGIARHRDFKVVIKFV 720
           V+ED+GTGI + R+FKV IKFV
Sbjct: 145 VEEDEGTGITKEREFKVTIKFV 166


>ref|XP_003524004.1| PREDICTED: protein argonaute PNH1-like [Glycine max]
          Length = 909

 Score =  170 bits (430), Expect = 3e-40
 Identities = 89/195 (45%), Positives = 126/195 (64%), Gaps = 1/195 (0%)
 Frame = +1

Query: 145 MKDPQEKHVVSRKPLQNSMNQQKPLQTCLVSLQDTXXXXXXXXXXXXXXXSQVESLKETK 324
           MKDP+E  V SR+PLQ S  +++  +                         ++E ++ET+
Sbjct: 1   MKDPEEHPVKSRRPLQKSAERRRRCRR--------------------RSQCKIEKMQETE 40

Query: 325 VDLQLE-PLVSSKGLTFHRRPGYGRAGTKCIVKANHFLVELSANDLNHYHVMITPEPKAS 501
           +D  L     + K L FH+RPG+G+ GTKC++KANHFL ++S +DL+HY+V+ITPE  + 
Sbjct: 41  LDSHLGFSSATCKSLVFHQRPGFGQLGTKCVIKANHFLADISVSDLSHYNVIITPEVTSR 100

Query: 502 LLKCNRAVMAQLVKLYRESDLGMRLPAYDGRNSLYTAGLLPFTSKEFSITLVDEDDGTGI 681
             K ++A++A+LV+L+R +DL  RLP YDG  +LYTAGLLPFT K F++TL  +DD TG 
Sbjct: 101 --KTSKAIIAELVRLHRNTDLATRLPVYDGGRNLYTAGLLPFTYKVFNVTLSVDDDATGG 158

Query: 682 ARHRDFKVVIKFVAR 726
            R RDFKVVIKF  R
Sbjct: 159 TRERDFKVVIKFATR 173


>ref|XP_002517060.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223543695|gb|EEF45223.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 986

 Score =  165 bits (418), Expect = 8e-39
 Identities = 87/126 (69%), Positives = 97/126 (76%), Gaps = 1/126 (0%)
 Frame = +1

Query: 352 SSKGLTFHRRPGYGRAGTKCIVKANHFLVELSANDLNHYHVMITPEPKASLLKCNRAVMA 531
           SSK LT+ RRPGYG+ GTKCIVKANHF  EL   DLN Y V ITPE  +     NRA+MA
Sbjct: 124 SSKSLTYARRPGYGQLGTKCIVKANHFFAELLDKDLNQYDVTITPEVASRTT--NRAIMA 181

Query: 532 QLVKLYRESDLGMRLPAYDGRNSLYTAGLLPFTSKEFSITLVDEDDG-TGIARHRDFKVV 708
           +LV+LY+ESDLGMRLPAYDGR SLYT+G LPF  KEF I LVDEDDG  G  R R++KVV
Sbjct: 182 ELVRLYKESDLGMRLPAYDGRKSLYTSGELPFAWKEFIIKLVDEDDGVNGPKREREYKVV 241

Query: 709 IKFVAR 726
           IKFVAR
Sbjct: 242 IKFVAR 247


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