BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011442
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi...   110   4e-22
ref|XP_002519272.1| conserved hypothetical protein [Ricinus comm...    99   1e-18
ref|XP_003533129.1| PREDICTED: F-box protein At5g49610-like [Gly...    89   1e-15
ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...    88   4e-15
ref|XP_003546303.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...    87   8e-15

>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
            gi|296088512|emb|CBI37503.3| unnamed protein product
            [Vitis vinifera]
          Length = 378

 Score =  110 bits (276), Expect = 4e-22
 Identities = 96/362 (26%), Positives = 158/362 (43%), Gaps = 50/362 (13%)
 Frame = -3

Query: 937  SDELILEILIRVPPKTLFRAKCVCKRWLLLISDSSFVRRRESLPPLITGFFYQ-----TD 773
            SD++ +++L R+P KTL   KCVCKRW  +ISD SF++     P  + GFF+Q      D
Sbjct: 3    SDDICMDVLSRLPTKTLLGLKCVCKRWRRIISDRSFIQDLLQRPEPLAGFFFQERYQWCD 62

Query: 772  NDDEMVNFYSDFDNEIDCNVADLSFLQHSVLVVASHNGLLLCAET-PNPGWWSEPYPINF 596
             D   +++               SFL   V+++ S NGL+ C    P+P    +P   + 
Sbjct: 63   EDISTISYIPATMEGTQVQQTIFSFLPEDVVILGSCNGLVCCRSVFPSP----DP---SI 115

Query: 595  FVCNPFTKQWVALPKNHLQPRKILLYS-----YYEEDSKHIEFKVVYMISRGKYEME--- 440
            FVCNP  KQW+ L +    P K   Y      +         FKVV  +S+ + +M+   
Sbjct: 116  FVCNPSNKQWIRLLET--TPDKESSYGLAFNPFQSPIDMPTNFKVV-RVSQAQTDMDDDS 172

Query: 439  ---FATYSSEIGEWRVSVISHALDESILVNNSVY---------------CWDMFDTRLWI 314
               F  YSS+ G W+ S      + ++  N  ++                +++ +   W+
Sbjct: 173  YFSFEIYSSQAGAWKKSKEICQCNHNLFKNKGIFVGGILHWLTDGDQVLSFNIENELSWL 232

Query: 313  YDLKDQSIRYVTGRPMCYKCSLFGESSGSVYFVGINETCMCLWVIVDQVE--WSLVYSIT 140
                  +I       MC      GES G ++++ I+E  + +W + D  +  WSLV+S T
Sbjct: 233  ISAPFPTIHLTAIPEMC-----IGESRGRLHYIMISEDGLQVWALEDYYDSNWSLVHSTT 287

Query: 139  TESLINQLP----------------DNGYFFFPCEFLPNHKILLMMEGHSEVFLYHIGTR 8
             E +  +                  D+  +  P  F      LL+M   +++ LY IGTR
Sbjct: 288  LEVMEEENSQLLYNTRDRVAQRISIDSIPWMDPLAFKDG---LLLMRVSTKIILYCIGTR 344

Query: 7    RI 2
            ++
Sbjct: 345  KM 346


>ref|XP_002519272.1| conserved hypothetical protein [Ricinus communis]
           gi|223541587|gb|EEF43136.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 325

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 81/311 (26%), Positives = 132/311 (42%), Gaps = 7/311 (2%)
 Frame = -3

Query: 940 LSDELILEILIRVPPKTLFRAKCVCKRWLLLISDSSFVRRRESLPPLITGFFYQTDNDDE 761
           L DE++L+IL R+P K+LFRAK VCK W  L  D  F++    +         +  +  E
Sbjct: 8   LPDEIVLQILARLPVKSLFRAKTVCKLWYRLSLDKYFIQLYNEVAARNPMVLVEISDSSE 67

Query: 760 MVNFYSDFDNEIDCNVADLSFLQHSVLVVASHNGLLLCAETPNPGWWSEPYPINFFVCNP 581
             +     DN    +   L FL+  V V AS NGLL C+  P+ G         ++VCNP
Sbjct: 68  SKSSLLCIDNLRGVSEFSLDFLKDRVKVRASCNGLLCCSSIPDKG--------VYYVCNP 119

Query: 580 FTKQWVALPKNHLQPRKILLYSYYEEDSKHIEFKVVYMISRGKYEMEFATYSSEIGEWRV 401
            T+++  LP++  +P      + +  D +     +   +S  K+ +  A Y    G    
Sbjct: 120 MTREFKLLPRSRERP-----VTRFYPDGEATLVGIACNLSMQKFNVVLAGYHRTFGHRNQ 174

Query: 400 SVISHALDESILVNNSVYCWDMFDTRLWIYDLKDQSIRYVTGRPMCYKCSLFGESSGSVY 221
            V  +     + ++ S       D  +W   L    + Y  G  +        ES G + 
Sbjct: 175 VVFVNGALHWLTISCSCILALYLDCDVWKKILLPDEVSYGAGNRV-----YLLESDGCLS 229

Query: 220 FVGINETCMCLWVI-VDQVEWSLVYSITTESLINQLPDNGYFFFP------CEFLPNHKI 62
            + I+E  M +WV+  +  EW +V  ++   +   +P      FP      C FL  HK 
Sbjct: 230 VIQISEAWMTIWVMDYETEEWHMVDRVSLRCIRGMVPG----IFPISQTGECVFLATHKQ 285

Query: 61  LLMMEGHSEVF 29
           +L+    S V+
Sbjct: 286 ILVYHRRSRVW 296


>ref|XP_003533129.1| PREDICTED: F-box protein At5g49610-like [Glycine max]
          Length = 372

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 89/343 (25%), Positives = 151/343 (44%), Gaps = 36/343 (10%)
 Frame = -3

Query: 949 GLFLSDELILEILIRVPPKTLFRAKCVCKRWLLLISDSSFVRRRESLPPLITGFFYQTDN 770
           G+F  DE++++IL R+P K+LFR K VCK W  L  D  F++    +         +  +
Sbjct: 19  GIF-PDEVVIQILARLPVKSLFRFKTVCKLWYRLSLDKYFIQLYNEVSRKNPMILVEISD 77

Query: 769 DDEMVNFYSDFDNEIDCNVADLSFLQHSVLVVASHNGLLLCAETPNPGWWSEPYPINFFV 590
             E        DN    +   L+FL   V V AS NGLL C+  P+ G         F+V
Sbjct: 78  SSESKTSLICVDNLRGVSEFSLNFLNDRVKVRASCNGLLCCSSIPDKG--------VFYV 129

Query: 589 CNPFTKQWVALPKNHLQPRKILLYSYYEE----------DSKHIEFKVV----YMISRGK 452
           CNP T+++  LPK+    R+  +  +Y +          DS + +F VV    + +   +
Sbjct: 130 CNPVTREYRLLPKS----RERHVTRFYPDGEATLVGLACDSAYRKFNVVLAGYHRMFGHR 185

Query: 451 YEMEF--ATYSSEIGEWRVSV------ISHA-LDESILVNNSVYCWDMFDTRLWIYDLKD 299
            +  F    + SE+ +WR  V       +H   ++ + VNN+++      T + + DL  
Sbjct: 186 PDGSFICLVFDSELNKWRKFVSFQDDHFTHMNKNQVVFVNNALHWLTASSTYILVLDLSC 245

Query: 298 QSIRYVTGRPMCYKCSLFG-----ESSGSVYFVGINETCMCLWVIVD--QVEWSLVYSIT 140
           +  R +   P    C         +  G +  + I+E  M +WV+ D  + EW +V  ++
Sbjct: 246 EVWRKMQ-LPYDLICGTGNRIYLLDFDGCLSVIKISEAWMNIWVLKDYWKDEWCMVDKVS 304

Query: 139 TESLINQLPDNGYFFFP------CEFLPNHKILLMMEGHSEVF 29
              +   +P      FP      C FL  HK +L+    ++V+
Sbjct: 305 LRCIRGMVPG----IFPISQTGECVFLATHKQILVYHRKTQVW 343


>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 24/300 (8%)
 Frame = -3

Query: 937 SDELILEILIRVPPKTLFRAKCVCKRWLLLISDSSFVRRRESLPP--LITGFFYQTDNDD 764
           +++LI +IL+R+P K L R K V K+WL LIS   F        P   I+  F +    +
Sbjct: 13  NEDLITQILLRLPVKPLLRFKSVSKQWLSLISTPHFSSLHTLRNPNHTISALFLRNSPLE 72

Query: 763 EMVNFYSDFDNEIDCNVADLSF-LQHSVLVVASHNGLLLCAETPNPGWWSEPYPINFFVC 587
                 S   +    + + LSF L H + ++ S NGLLLC+  P  G        N+++ 
Sbjct: 73  FKFLSLSSSSSSSSSSASPLSFDLFHGIKILQSCNGLLLCSTLPKIG-----QKRNYYIS 127

Query: 586 NPFTKQWVALPK-----NHLQPRKILLYSYYEEDSKHIEFKVVYMIS--RGKYEMEFATY 428
           NP TKQ   LP      N   P  +   +   +  K   +KV+ + S     Y+ +  TY
Sbjct: 128 NPTTKQMFTLPSLVGDANAASPTTLFGLNLAFDPLKSCNYKVICVRSTTNSIYQYQIETY 187

Query: 427 SSEIGEWRVSVISHALDESILVNNSVYC-----WDMFDTRLWIYDLKDQSIRYVTGRPMC 263
            SEI  WR+S +       ++ +N V+      W         +D+  + I  +   P  
Sbjct: 188 QSEIAAWRLSGLPFVAPFDMVFDNGVFWNGAIHWISATGNAIYFDMDRECISSMPKLPFS 247

Query: 262 Y-----KCSLFGESSGSVYFV---GINETCMCLWVI-VDQVEWSLVYSITTESLINQLPD 110
           Y     +   FGES G ++ +   G+  T   ++ +  D   W + Y +  + ++   P+
Sbjct: 248 YEWGKRRFRYFGESDGHLHLIEIYGLRTTQFNVYEMEKDYSFWRIRYRVQLDHVVAAFPE 307


>ref|XP_003546303.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At5g49610-like
           [Glycine max]
          Length = 359

 Score = 86.7 bits (213), Expect = 8e-15
 Identities = 92/349 (26%), Positives = 155/349 (44%), Gaps = 42/349 (12%)
 Frame = -3

Query: 949 GLFLSDELILEILIRVPPKTLFRAKCVCKRWLLLISDSSFVRRRE--SLPPLITGFFYQT 776
           G+F  DE++++IL R+P K+LFR K VCK W  L  D  F++  +     P+I     + 
Sbjct: 7   GIF-PDEVVIQILARLPVKSLFRFKTVCKLWYRLSLDKYFIQLXQVSRKNPMI---LVEI 62

Query: 775 DNDDEMVNFYSDFDNEIDCNVADLSFLQHSVLVVASHNGLLLCAETPNPGWWSEPYPINF 596
            +  E        DN    +   L+FL   V V AS NGLL C+  P+ G         F
Sbjct: 63  SDSSESKTSLICVDNLRGVSEFSLNFLNDRVKVRASCNGLLCCSSIPDKG--------VF 114

Query: 595 FVCNPFTKQWVALPKNHLQPRKILLYSYYEE----------DSKHIEFKVV----YMISR 458
           +VCNP T+++  LPK+    R+  +  +Y +          DS H +F VV    + +  
Sbjct: 115 YVCNPVTREYRLLPKS----RERHVTRFYPDGEATLVGLACDSAHQKFNVVLAGYHRMFG 170

Query: 457 GKYEMEF--ATYSSEIGEWRVSV------ISHA-LDESILVNNSVYCWDMFDTRLWIYDL 305
            + +  F    + SE+ +WR  V       +H   ++ + VN +++      T + + DL
Sbjct: 171 HRPDGSFICLVFDSELNKWRKFVSFQDDHFTHMNKNQVVFVNIALHWLTASSTYILVLDL 230

Query: 304 K---------DQSIRYVTGRPMCYKCSLFGESSGSVYFVGINETCMCLWVIVD--QVEWS 158
                       ++ Y TG  + Y   L     G +  + I+E  M +WV+ D  + EW 
Sbjct: 231 SCDVWRKMQLPYNLIYGTGNRI-YLLDL----DGCLSVIKISEAWMNIWVLKDYWKDEWC 285

Query: 157 LVYSITTESLINQLPDNGYFFFP------CEFLPNHKILLMMEGHSEVF 29
           +V  ++   +   +P      FP      C FL  HK +L+    ++++
Sbjct: 286 MVDKVSLRCIRGMVPG----IFPISQTGECVFLATHKQILVYHRKTQIW 330