BLASTX nr result

ID: Cimicifuga21_contig00011435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011435
         (924 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298976.1| predicted protein [Populus trichocarpa] gi|2...   267   3e-69
ref|XP_004165510.1| PREDICTED: 50S ribosomal protein L11, chloro...   263   3e-68
ref|XP_004145879.1| PREDICTED: 50S ribosomal protein L11, chloro...   263   3e-68
ref|XP_002317659.1| predicted protein [Populus trichocarpa] gi|2...   263   6e-68
ref|XP_002278388.1| PREDICTED: 50S ribosomal protein L11, chloro...   262   7e-68

>ref|XP_002298976.1| predicted protein [Populus trichocarpa] gi|222846234|gb|EEE83781.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  267 bits (682), Expect = 3e-69
 Identities = 133/143 (93%), Positives = 140/143 (97%)
 Frame = -2

Query: 656 VIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDK 477
           VIG+IKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNA+TADKAGYVIPVEITVYDDK
Sbjct: 27  VIGLIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDK 86

Query: 476 SFTFILKTPPASVLLLKAAGVEKGSKDPKLEKVGKVTIDQLRTIATEKLPDLNCTNIDSA 297
           SFTFILKTPPASVLLLKAAGVEKGSKDPK+EKVGKVTIDQLRTIATEKLPDLNCT I+SA
Sbjct: 87  SFTFILKTPPASVLLLKAAGVEKGSKDPKMEKVGKVTIDQLRTIATEKLPDLNCTTIESA 146

Query: 296 MRIIAGTAANMGIEVEPPLLAAK 228
           MRIIAGTAANMGI+V+PP+L  K
Sbjct: 147 MRIIAGTAANMGIDVDPPILEPK 169


>ref|XP_004165510.1| PREDICTED: 50S ribosomal protein L11, chloroplastic-like [Cucumis
           sativus]
          Length = 181

 Score =  263 bits (673), Expect = 3e-68
 Identities = 131/144 (90%), Positives = 139/144 (96%)
 Frame = -2

Query: 656 VIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDK 477
           VIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDK
Sbjct: 34  VIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDK 93

Query: 476 SFTFILKTPPASVLLLKAAGVEKGSKDPKLEKVGKVTIDQLRTIATEKLPDLNCTNIDSA 297
           SFTF+LKTPPASVLLLKAAGVEKGSKDPK EKVGK+TI+QLRTIA EKLPDLNCT I+SA
Sbjct: 94  SFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRTIAAEKLPDLNCTTIESA 153

Query: 296 MRIIAGTAANMGIEVEPPLLAAKS 225
           MRIIAGTAANMGIE++PP+L  K+
Sbjct: 154 MRIIAGTAANMGIEIDPPVLEPKT 177


>ref|XP_004145879.1| PREDICTED: 50S ribosomal protein L11, chloroplastic-like [Cucumis
           sativus]
          Length = 279

 Score =  263 bits (673), Expect = 3e-68
 Identities = 131/144 (90%), Positives = 139/144 (96%)
 Frame = -2

Query: 656 VIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDK 477
           VIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDK
Sbjct: 132 VIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDK 191

Query: 476 SFTFILKTPPASVLLLKAAGVEKGSKDPKLEKVGKVTIDQLRTIATEKLPDLNCTNIDSA 297
           SFTF+LKTPPASVLLLKAAGVEKGSKDPK EKVGK+TI+QLRTIA EKLPDLNCT I+SA
Sbjct: 192 SFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRTIAAEKLPDLNCTTIESA 251

Query: 296 MRIIAGTAANMGIEVEPPLLAAKS 225
           MRIIAGTAANMGIE++PP+L  K+
Sbjct: 252 MRIIAGTAANMGIEIDPPVLEPKT 275


>ref|XP_002317659.1| predicted protein [Populus trichocarpa] gi|222860724|gb|EEE98271.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  263 bits (671), Expect = 6e-68
 Identities = 130/144 (90%), Positives = 139/144 (96%)
 Frame = -2

Query: 656 VIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDK 477
           VIG+IKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNA+TADKAGYVIPVEITVYDDK
Sbjct: 27  VIGLIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDK 86

Query: 476 SFTFILKTPPASVLLLKAAGVEKGSKDPKLEKVGKVTIDQLRTIATEKLPDLNCTNIDSA 297
           SFTF+LKTPPASVLLLKAAGVEKGSKDPK+EKVG VTIDQLR IATEKLPDLNCT I+SA
Sbjct: 87  SFTFVLKTPPASVLLLKAAGVEKGSKDPKMEKVGMVTIDQLRAIATEKLPDLNCTTIESA 146

Query: 296 MRIIAGTAANMGIEVEPPLLAAKS 225
           MRIIAGTAANMGI+V+PP+L  K+
Sbjct: 147 MRIIAGTAANMGIDVDPPILEPKT 170


>ref|XP_002278388.1| PREDICTED: 50S ribosomal protein L11, chloroplastic-like [Vitis
           vinifera]
          Length = 217

 Score =  262 bits (670), Expect = 7e-68
 Identities = 139/181 (76%), Positives = 150/181 (82%), Gaps = 4/181 (2%)
 Frame = -2

Query: 758 HFSRHFLQVK--PSSPSTPSSLIVXXXXXXXXXXXK--VIGMIKLALEAGKATPAPPVGP 591
           + S  FL  K  P   STP +L V              V GMIKLALEAGKATPAPPVGP
Sbjct: 32  NISLQFLPTKKCPFLSSTPRALTVISMAPPKPGGKSKKVTGMIKLALEAGKATPAPPVGP 91

Query: 590 ALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFILKTPPASVLLLKAAGVE 411
           ALGSKGVNIMAFCKDYNA+TADKAGYVIPVEITVYDDKSFTF+LKTPPASVLLLKAAG E
Sbjct: 92  ALGSKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGAE 151

Query: 410 KGSKDPKLEKVGKVTIDQLRTIATEKLPDLNCTNIDSAMRIIAGTAANMGIEVEPPLLAA 231
           KG+KDPK EKVGK+TI+QLRTIATEKLPDLNCT+I+SAMRIIAGTAANMGIEV+PP+L  
Sbjct: 152 KGAKDPKQEKVGKITIEQLRTIATEKLPDLNCTSIESAMRIIAGTAANMGIEVDPPVLEP 211

Query: 230 K 228
           K
Sbjct: 212 K 212


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