BLASTX nr result

ID: Cimicifuga21_contig00011421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011421
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK23391.1| unknown [Picea sitchensis]                              61   8e-08
ref|XP_002522799.1| Pre-mRNA-splicing factor cwc15, putative [Ri...    58   7e-07
ref|XP_003549915.1| PREDICTED: protein CWC15 homolog [Glycine max]     57   2e-06
ref|NP_001242220.1| uncharacterized protein LOC100790612 [Glycin...    57   2e-06
ref|XP_004149567.1| PREDICTED: protein CWC15 homolog A-like [Cuc...    57   2e-06

>gb|ABK23391.1| unknown [Picea sitchensis]
          Length = 231

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/39 (76%), Positives = 32/39 (82%)
 Frame = +2

Query: 35  LARREIWQCRKEGQDTQDELQKRNLRDELEEREWRHFSS 151
           LA     + RK+GQDTQDELQKRNLRDELEERE RHFSS
Sbjct: 35  LAAHTTLKSRKDGQDTQDELQKRNLRDELEEREHRHFSS 73


>ref|XP_002522799.1| Pre-mRNA-splicing factor cwc15, putative [Ricinus communis]
           gi|223538037|gb|EEF39650.1| Pre-mRNA-splicing factor
           cwc15, putative [Ricinus communis]
          Length = 230

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = +2

Query: 62  RKEGQDTQDELQKRNLRDELEEREWRHFSS 151
           R+EGQDTQDELQKRNLR+ELEERE RHFSS
Sbjct: 44  RREGQDTQDELQKRNLREELEERERRHFSS 73


>ref|XP_003549915.1| PREDICTED: protein CWC15 homolog [Glycine max]
          Length = 228

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +2

Query: 62  RKEGQDTQDELQKRNLRDELEEREWRHFSS 151
           RKEGQDTQDEL++RNLRDELE+RE RHFSS
Sbjct: 44  RKEGQDTQDELKRRNLRDELEDRERRHFSS 73


>ref|NP_001242220.1| uncharacterized protein LOC100790612 [Glycine max]
           gi|255639321|gb|ACU19958.1| unknown [Glycine max]
          Length = 213

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +2

Query: 62  RKEGQDTQDELQKRNLRDELEEREWRHFSS 151
           RKEGQDTQDEL++RNLRDELE+RE RHFSS
Sbjct: 29  RKEGQDTQDELKRRNLRDELEDRERRHFSS 58


>ref|XP_004149567.1| PREDICTED: protein CWC15 homolog A-like [Cucumis sativus]
          Length = 228

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +2

Query: 62  RKEGQDTQDELQKRNLRDELEEREWRHFSS 151
           RKEGQDT DELQ+RNLRDELE+RE RHFSS
Sbjct: 44  RKEGQDTHDELQRRNLRDELEDRERRHFSS 73


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