BLASTX nr result

ID: Cimicifuga21_contig00011405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011405
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF69802.1|AF195869_1 malate dehydrogenase [Vitis vinifera]        115   5e-24
emb|CBI30662.3| unnamed protein product [Vitis vinifera]              115   5e-24
ref|XP_002275442.1| PREDICTED: malate dehydrogenase, mitochondri...   115   5e-24
emb|CBI20215.3| unnamed protein product [Vitis vinifera]              113   2e-23
ref|XP_002285356.1| PREDICTED: malate dehydrogenase, mitochondri...   113   2e-23

>gb|AAF69802.1|AF195869_1 malate dehydrogenase [Vitis vinifera]
          Length = 352

 Score =  115 bits (287), Expect = 5e-24
 Identities = 61/84 (72%), Positives = 63/84 (75%)
 Frame = +3

Query: 3   LFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPTGSNLSDEEIT 182
           LFGVTTLDVVRAKTFY                  HAGITILPLFSQATP  +NLSDE+I 
Sbjct: 179 LFGVTTLDVVRAKTFYAGKAKVPVAEANVPVVGGHAGITILPLFSQATPKSNNLSDEDIV 238

Query: 183 ALTKRTQDGGTEVVEAKAGKGSAT 254
           ALTKRTQDGGTEVVEAKAGKGSAT
Sbjct: 239 ALTKRTQDGGTEVVEAKAGKGSAT 262


>emb|CBI30662.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  115 bits (287), Expect = 5e-24
 Identities = 61/84 (72%), Positives = 63/84 (75%)
 Frame = +3

Query: 3   LFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPTGSNLSDEEIT 182
           LFGVTTLDVVRAKTFY                  HAGITILPLFSQATP  +NLSDE+I 
Sbjct: 123 LFGVTTLDVVRAKTFYAGKAKVPVAEANVPVVGGHAGITILPLFSQATPKSNNLSDEDIV 182

Query: 183 ALTKRTQDGGTEVVEAKAGKGSAT 254
           ALTKRTQDGGTEVVEAKAGKGSAT
Sbjct: 183 ALTKRTQDGGTEVVEAKAGKGSAT 206


>ref|XP_002275442.1| PREDICTED: malate dehydrogenase, mitochondrial [Vitis vinifera]
          Length = 352

 Score =  115 bits (287), Expect = 5e-24
 Identities = 61/84 (72%), Positives = 63/84 (75%)
 Frame = +3

Query: 3   LFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPTGSNLSDEEIT 182
           LFGVTTLDVVRAKTFY                  HAGITILPLFSQATP  +NLSDE+I 
Sbjct: 179 LFGVTTLDVVRAKTFYAGKAKVPVAEANVPVVGGHAGITILPLFSQATPKSNNLSDEDIV 238

Query: 183 ALTKRTQDGGTEVVEAKAGKGSAT 254
           ALTKRTQDGGTEVVEAKAGKGSAT
Sbjct: 239 ALTKRTQDGGTEVVEAKAGKGSAT 262


>emb|CBI20215.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  113 bits (282), Expect = 2e-23
 Identities = 60/84 (71%), Positives = 62/84 (73%)
 Frame = +3

Query: 3   LFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPTGSNLSDEEIT 182
           LFGVTTLDVVRAKTFY                  HAGITILPLFSQ TP  +NLSDE+I 
Sbjct: 175 LFGVTTLDVVRAKTFYAAKAKVPVSEVNVPVVGGHAGITILPLFSQTTPKSNNLSDEDIQ 234

Query: 183 ALTKRTQDGGTEVVEAKAGKGSAT 254
           ALTKRTQDGGTEVVEAKAGKGSAT
Sbjct: 235 ALTKRTQDGGTEVVEAKAGKGSAT 258


>ref|XP_002285356.1| PREDICTED: malate dehydrogenase, mitochondrial [Vitis vinifera]
           gi|147866868|emb|CAN83064.1| hypothetical protein
           VITISV_004210 [Vitis vinifera]
          Length = 351

 Score =  113 bits (282), Expect = 2e-23
 Identities = 60/84 (71%), Positives = 62/84 (73%)
 Frame = +3

Query: 3   LFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPTGSNLSDEEIT 182
           LFGVTTLDVVRAKTFY                  HAGITILPLFSQ TP  +NLSDE+I 
Sbjct: 179 LFGVTTLDVVRAKTFYAAKAKVPVSEVNVPVVGGHAGITILPLFSQTTPKSNNLSDEDIQ 238

Query: 183 ALTKRTQDGGTEVVEAKAGKGSAT 254
           ALTKRTQDGGTEVVEAKAGKGSAT
Sbjct: 239 ALTKRTQDGGTEVVEAKAGKGSAT 262


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