BLASTX nr result

ID: Cimicifuga21_contig00011398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011398
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284969.1| PREDICTED: ubiquitin-conjugating enzyme E2 v...   279   9e-73
ref|NP_001238527.1| uncharacterized protein LOC100527089 [Glycin...   267   3e-69
gb|ACF06583.1| ubiquitin-conjugating enzyme 2 [Elaeis guineensis]     267   3e-69
ref|XP_004150842.1| PREDICTED: uncharacterized protein LOC101209...   266   5e-69
gb|ACU14604.1| unknown [Glycine max]                                  266   5e-69

>ref|XP_002284969.1| PREDICTED: ubiquitin-conjugating enzyme E2 variant 1A [Vitis
           vinifera] gi|147806487|emb|CAN63218.1| hypothetical
           protein VITISV_026897 [Vitis vinifera]
           gi|297737640|emb|CBI26841.3| unnamed protein product
           [Vitis vinifera]
          Length = 159

 Score =  279 bits (713), Expect = 9e-73
 Identities = 132/159 (83%), Positives = 142/159 (89%)
 Frame = +3

Query: 171 MASEASTVVVPRSFRXXXXXXRGEKGIGDGTVSYGMDDADDIYMRSWTGTIIGPPNTVHD 350
           M SE S VVVPR+FR      RGEKGIGDGTVSYGMDDADDIYM+SWTGTIIGPPNTVH+
Sbjct: 1   MGSEGSGVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPNTVHE 60

Query: 351 GRIYQLKLLCDRDYPDKAPTVKFQTRINMTCVNQETGLVEPSQFPMLAVWQREYTIEDIL 530
           GRIYQLKL C +DYPD  PTVKFQTRINMTCVNQETG+VEPS FPMLA WQRE+T+EDIL
Sbjct: 61  GRIYQLKLFCGQDYPDNPPTVKFQTRINMTCVNQETGVVEPSLFPMLATWQREHTMEDIL 120

Query: 531 TQLKKEMVSPQNRRLTQPPEGNEEQRMDQKGLVLKCCIL 647
           TQLKKEM+SPQNR+L QPPEGNEE R+DQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSPQNRKLAQPPEGNEEARIDQKGLVLKCCIL 159


>ref|NP_001238527.1| uncharacterized protein LOC100527089 [Glycine max]
           gi|255631530|gb|ACU16132.1| unknown [Glycine max]
          Length = 159

 Score =  267 bits (682), Expect = 3e-69
 Identities = 124/159 (77%), Positives = 138/159 (86%)
 Frame = +3

Query: 171 MASEASTVVVPRSFRXXXXXXRGEKGIGDGTVSYGMDDADDIYMRSWTGTIIGPPNTVHD 350
           M SE STVVVPR+FR      RGEKGIGDGTVSYGMDDADDIYM+SWTGTIIGPP TVH+
Sbjct: 1   MGSEGSTVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHE 60

Query: 351 GRIYQLKLLCDRDYPDKAPTVKFQTRINMTCVNQETGLVEPSQFPMLAVWQREYTIEDIL 530
           GRIYQLKL C +DYPD  PTV+FQTRINMTCVNQETG+VEP  FPMLA WQRE T+EDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPTVRFQTRINMTCVNQETGVVEPHLFPMLANWQRECTMEDIL 120

Query: 531 TQLKKEMVSPQNRRLTQPPEGNEEQRMDQKGLVLKCCIL 647
            QLKKEM+SPQNR+L QPPEGNE+ R+DQKGL L+CC++
Sbjct: 121 MQLKKEMISPQNRKLAQPPEGNEDGRIDQKGLALRCCVM 159


>gb|ACF06583.1| ubiquitin-conjugating enzyme 2 [Elaeis guineensis]
          Length = 159

 Score =  267 bits (682), Expect = 3e-69
 Identities = 127/159 (79%), Positives = 138/159 (86%)
 Frame = +3

Query: 171 MASEASTVVVPRSFRXXXXXXRGEKGIGDGTVSYGMDDADDIYMRSWTGTIIGPPNTVHD 350
           M SE S VVVPR+FR      RGEKGIGDGTVSYGMDDADDIYMRSWTGTIIGP NTVH+
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMRSWTGTIIGPHNTVHE 60

Query: 351 GRIYQLKLLCDRDYPDKAPTVKFQTRINMTCVNQETGLVEPSQFPMLAVWQREYTIEDIL 530
           GRIYQLKL CD+DYPD  PTV+FQTRINMTCVNQETG+VEPS FPMLA WQREYT+EDIL
Sbjct: 61  GRIYQLKLFCDKDYPDNPPTVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMEDIL 120

Query: 531 TQLKKEMVSPQNRRLTQPPEGNEEQRMDQKGLVLKCCIL 647
             LKKEM S QNR+L QPPEG ++QRM+QKGLVL+CCIL
Sbjct: 121 VNLKKEMSSAQNRKLYQPPEGIDDQRMEQKGLVLRCCIL 159


>ref|XP_004150842.1| PREDICTED: uncharacterized protein LOC101209154 [Cucumis sativus]
          Length = 678

 Score =  266 bits (681), Expect = 5e-69
 Identities = 127/162 (78%), Positives = 138/162 (85%)
 Frame = +3

Query: 162  LHIMASEASTVVVPRSFRXXXXXXRGEKGIGDGTVSYGMDDADDIYMRSWTGTIIGPPNT 341
            L  M  EA+ VVVPR+FR      RGEKGIGDGTVSYGMDDADDIYM SWTGTIIGPPNT
Sbjct: 517  LQAMGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNT 576

Query: 342  VHDGRIYQLKLLCDRDYPDKAPTVKFQTRINMTCVNQETGLVEPSQFPMLAVWQREYTIE 521
            VH+GRIYQLKL C +DYPD  P V+FQTRINMTCVN ETG+VEPS FPMLA WQRE+T+E
Sbjct: 577  VHEGRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNSETGVVEPSLFPMLANWQREHTME 636

Query: 522  DILTQLKKEMVSPQNRRLTQPPEGNEEQRMDQKGLVLKCCIL 647
            DIL QLKKEM SPQNRRL+QP EGNE+ R+DQKGLVLKCCIL
Sbjct: 637  DILMQLKKEMTSPQNRRLSQPSEGNEDGRIDQKGLVLKCCIL 678


>gb|ACU14604.1| unknown [Glycine max]
          Length = 159

 Score =  266 bits (681), Expect = 5e-69
 Identities = 124/159 (77%), Positives = 141/159 (88%)
 Frame = +3

Query: 171 MASEASTVVVPRSFRXXXXXXRGEKGIGDGTVSYGMDDADDIYMRSWTGTIIGPPNTVHD 350
           M SE S+VVVPR+FR      RGEKGIGDGTVSYGMDDADDIYM+SWTGTIIGPP+TVH+
Sbjct: 1   MGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPSTVHE 60

Query: 351 GRIYQLKLLCDRDYPDKAPTVKFQTRINMTCVNQETGLVEPSQFPMLAVWQREYTIEDIL 530
           GRIYQLKL C RDYPD  P+V+FQTRINMTCVNQETG+VEP  FPMLA W+RE T+EDIL
Sbjct: 61  GRIYQLKLFCSRDYPDNPPSVRFQTRINMTCVNQETGVVEPHLFPMLANWKRERTMEDIL 120

Query: 531 TQLKKEMVSPQNRRLTQPPEGNEEQRMDQKGLVLKCCIL 647
            QLK+EM+SPQNR+LTQPPEGNEE R+DQKGLV++CCI+
Sbjct: 121 IQLKREMMSPQNRKLTQPPEGNEESRVDQKGLVVRCCIV 159


Top