BLASTX nr result

ID: Cimicifuga21_contig00011395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011395
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBA12000.1| putative auxin response factor 3 [Illicium parvi...    75   4e-12
emb|CAX63126.1| ETTIN protein [Amborella trichopoda]                   70   2e-10
emb|CAX63117.1| ETTIN protein [Amborella trichopoda]                   70   2e-10
emb|CBA12005.1| putative auxin response factor 3/4, partial [Cyc...    68   7e-10
emb|CAX63133.1| ARF-L1 protein [Ginkgo biloba]                         66   3e-09

>emb|CBA12000.1| putative auxin response factor 3 [Illicium parviflorum]
          Length = 837

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = -1

Query: 385 EDDMMLVGDDPWKEFCNIVSRILIFTHDEEVLMAAEVRGNDAHSFSEE 242
           EDDMMLVGDDPW+EFCNIVS+ILI+THDE  LM      +DAHS SEE
Sbjct: 767 EDDMMLVGDDPWQEFCNIVSKILIYTHDEVELMVPGGTSDDAHSCSEE 814


>emb|CAX63126.1| ETTIN protein [Amborella trichopoda]
          Length = 478

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/49 (67%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
 Frame = -1

Query: 385 EDDMMLVGDDPWKEFCNIVSRILIFTHDE-EVLMAAEVRGNDAHSFSEE 242
           +DDMMLVGDDPW+EFCNIVS+ILI+THDE E ++   V  +DA S SEE
Sbjct: 396 DDDMMLVGDDPWQEFCNIVSKILIYTHDEVEKMIPVVVASDDAQSCSEE 444


>emb|CAX63117.1| ETTIN protein [Amborella trichopoda]
          Length = 840

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/49 (67%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
 Frame = -1

Query: 385 EDDMMLVGDDPWKEFCNIVSRILIFTHDE-EVLMAAEVRGNDAHSFSEE 242
           +DDMMLVGDDPW+EFCNIVS+ILI+THDE E ++   V  +DA S SEE
Sbjct: 758 DDDMMLVGDDPWQEFCNIVSKILIYTHDEVEKMIPVVVASDDAQSCSEE 806


>emb|CBA12005.1| putative auxin response factor 3/4, partial [Cycas rumphii]
          Length = 811

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/48 (64%), Positives = 37/48 (77%)
 Frame = -1

Query: 385 EDDMMLVGDDPWKEFCNIVSRILIFTHDEEVLMAAEVRGNDAHSFSEE 242
           EDDMMLVGDDPW+EFCNIV +ILI+TH+E       +  +DAHS SEE
Sbjct: 726 EDDMMLVGDDPWQEFCNIVCKILIYTHEELKKWTPGMLSDDAHSCSEE 773


>emb|CAX63133.1| ARF-L1 protein [Ginkgo biloba]
          Length = 958

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
 Frame = -1

Query: 385  EDDMMLVGDDPWKEFCNIVSRILIFTHDEEVLMAAEVRGNDAHSFSEEIAGGIGASDFSS 206
            E+D+MLVGDDPW+EFCNIV +ILI+TH+E   MA  +  +DA S S+E    I  S  S 
Sbjct: 886  ENDIMLVGDDPWQEFCNIVCKILIYTHEEVEKMAPGMFSDDAQSCSDEQPAIIEVSKSSI 945

Query: 205  GYQ--CSSP 185
              Q  CS P
Sbjct: 946  DCQDSCSPP 954


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