BLASTX nr result

ID: Cimicifuga21_contig00011384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011384
         (1834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69419.1| hypothetical protein VITISV_028794 [Vitis vinifera]   584   e-164
ref|XP_002278544.1| PREDICTED: protein ABCI7, chloroplastic-like...   583   e-164
emb|CBI33903.3| unnamed protein product [Vitis vinifera]              583   e-164
ref|XP_003631753.1| PREDICTED: LOW QUALITY PROTEIN: protein ABCI...   562   e-157
ref|XP_002326712.1| predicted protein [Populus trichocarpa] gi|2...   557   e-156

>emb|CAN69419.1| hypothetical protein VITISV_028794 [Vitis vinifera]
          Length = 593

 Score =  584 bits (1506), Expect = e-164
 Identities = 298/470 (63%), Positives = 363/470 (77%), Gaps = 10/470 (2%)
 Frame = +1

Query: 226  LSNPRLQSRTQLAIHP---------IRATLSDPLVLQIAEALEDXXXXXXXXXXXXXXLQ 378
            L NP+L  +T  +  P         IRA  SDP VLQIAE+LED              LQ
Sbjct: 26   LLNPKLSIQTSASKFPTPKSRSTPKIRAAFSDPFVLQIAESLEDSLSSSSTSSPPP--LQ 83

Query: 379  KLRDTSSQSLLSVSWPTRKDEPFRFTDTTFIKNSQIKPVSVPSTPIPTHLNDTHFPSLVI 558
            KLRD SSQ++LS  WP+RKDEPFRFTDT+ I+ SQ+ P+S P T I     DT FP+L I
Sbjct: 84   KLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQVTPISHPPTSIAIS-TDTQFPNLSI 142

Query: 559  VDGHMVSS-SKISEFPDGVFIGRVSDIDSEIIKKSVFEFVSDFQDGDLFWSLNGIGTPDV 735
            VDGH+V S S +S+ P GVF+G +S + SE I K V EFV++F+ GDLFWSLNG+GTPD+
Sbjct: 143  VDGHIVYSLSNLSQLPTGVFVGSLSSLPSETITKXVSEFVANFE-GDLFWSLNGLGTPDM 201

Query: 736  TVVYVPSDCKVEDPLHLMFFSSESGDVGSNILPVSNPRVLVIVEKXXXXXXXXXHFDGDE 915
             VVYVP+ C+VE PLH++++S E GD+GS  LPVSNPRV V+VE+         +    E
Sbjct: 202  AVVYVPAGCRVEMPLHIVYYSVEGGDIGSKKLPVSNPRVFVLVEEGGEIGVIEEYVGVGE 261

Query: 916  SQCYWANSAVEVLIGEGGKVTHSYLQRQGPNSAHTKWTFVRQEASSTYKLVEISTGGKLS 1095
            ++CYWAN+  EV+IGEG KV HSY+Q Q  ++AH KWT V+Q +SS+Y+L+E+STGGKLS
Sbjct: 262  NKCYWANTVTEVVIGEGAKVKHSYIQSQSLSAAHIKWTSVQQGSSSSYELIEVSTGGKLS 321

Query: 1096 RHNLHVQQVGPETVTELSTFHLCVNEQTQDLHSRLVLDHPRGTSQQLHKCIVAHSSGQAV 1275
            RHN+++QQVGP+TVTELS FHL V +QTQDLHSRLVLDHPRG S+QLHKCIVAHS GQAV
Sbjct: 322  RHNVNIQQVGPDTVTELSAFHLSVGDQTQDLHSRLVLDHPRGYSRQLHKCIVAHSLGQAV 381

Query: 1276 FDGNVKVNRYAQQTNAGQLSRSLLLEPRATVNLKPNLQIIADDVKCSHGAAISDLEEDQL 1455
            FDGN+KVNRYAQ+T+AGQL+RSLLLEPRATVN+KPNLQIIADDVKCSHGAAISDLEE+QL
Sbjct: 382  FDGNIKVNRYAQRTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEENQL 441

Query: 1456 FYFRARGIDSKTARKALVLSFGAEVMGQLPYKSLRKKMEDHVKKLLEPAL 1605
            FYF ARGID +TARKAL+ SFG EV+ +LPY S+RKK+E H+K LLEP L
Sbjct: 442  FYFLARGIDLETARKALIFSFGGEVIERLPYSSIRKKVETHIKALLEPTL 491


>ref|XP_002278544.1| PREDICTED: protein ABCI7, chloroplastic-like [Vitis vinifera]
          Length = 495

 Score =  583 bits (1502), Expect = e-164
 Identities = 297/470 (63%), Positives = 362/470 (77%), Gaps = 10/470 (2%)
 Frame = +1

Query: 226  LSNPRLQSRTQLAIHP---------IRATLSDPLVLQIAEALEDXXXXXXXXXXXXXXLQ 378
            L NP+L  +   +  P         IRA  SDP VLQIAE+LED              LQ
Sbjct: 26   LLNPKLSIQNSASKFPTPKSRSTPKIRAAFSDPFVLQIAESLEDSLSSSSTSSPPP--LQ 83

Query: 379  KLRDTSSQSLLSVSWPTRKDEPFRFTDTTFIKNSQIKPVSVPSTPIPTHLNDTHFPSLVI 558
            KLRD SSQ++LS  WP+RKDEPFRFTDT+ I+ SQ+ P+S P T I     DT FP+L I
Sbjct: 84   KLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQVTPISHPPTSIAIS-TDTQFPNLSI 142

Query: 559  VDGHMVSS-SKISEFPDGVFIGRVSDIDSEIIKKSVFEFVSDFQDGDLFWSLNGIGTPDV 735
            VDGH+V S S +S+ P GVF+G +S + SE I K V EFV++F+ GDLFWSLNG+GTPD+
Sbjct: 143  VDGHIVYSLSNLSQLPTGVFVGSLSSLPSETITKKVSEFVANFE-GDLFWSLNGLGTPDM 201

Query: 736  TVVYVPSDCKVEDPLHLMFFSSESGDVGSNILPVSNPRVLVIVEKXXXXXXXXXHFDGDE 915
             VVYVP+ C+VE PLH++++S E GD+GS  LPVSNPRV V+VE+         +    E
Sbjct: 202  AVVYVPAGCRVEMPLHIVYYSVEGGDIGSKKLPVSNPRVFVLVEEGGEIGVIEEYVGVGE 261

Query: 916  SQCYWANSAVEVLIGEGGKVTHSYLQRQGPNSAHTKWTFVRQEASSTYKLVEISTGGKLS 1095
            ++CYWAN+  EV+IGEG KV HSY+Q Q  ++AH KWT V+Q +SS+Y+L+E+STGGKLS
Sbjct: 262  NKCYWANTVTEVVIGEGAKVKHSYIQSQSLSAAHIKWTSVQQGSSSSYELIEVSTGGKLS 321

Query: 1096 RHNLHVQQVGPETVTELSTFHLCVNEQTQDLHSRLVLDHPRGTSQQLHKCIVAHSSGQAV 1275
            RHN+++QQVGP+TVTELS FHL V +QTQDLHSRLVLDHPRG S+QLHKCIVAHS GQAV
Sbjct: 322  RHNVNIQQVGPDTVTELSAFHLSVGDQTQDLHSRLVLDHPRGYSRQLHKCIVAHSLGQAV 381

Query: 1276 FDGNVKVNRYAQQTNAGQLSRSLLLEPRATVNLKPNLQIIADDVKCSHGAAISDLEEDQL 1455
            FDGN+KVNRYAQ+T+AGQL+RSLLLEPRATVN+KPNLQIIADDVKCSHGAAISDLEE+QL
Sbjct: 382  FDGNIKVNRYAQRTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEENQL 441

Query: 1456 FYFRARGIDSKTARKALVLSFGAEVMGQLPYKSLRKKMEDHVKKLLEPAL 1605
            FYF ARGID +TARKAL+ SFG EV+ +LPY S+RKK+E H+K LLEP L
Sbjct: 442  FYFLARGIDLETARKALIFSFGGEVIERLPYSSIRKKVETHIKALLEPTL 491


>emb|CBI33903.3| unnamed protein product [Vitis vinifera]
          Length = 480

 Score =  583 bits (1502), Expect = e-164
 Identities = 297/470 (63%), Positives = 362/470 (77%), Gaps = 10/470 (2%)
 Frame = +1

Query: 226  LSNPRLQSRTQLAIHP---------IRATLSDPLVLQIAEALEDXXXXXXXXXXXXXXLQ 378
            L NP+L  +   +  P         IRA  SDP VLQIAE+LED              LQ
Sbjct: 11   LLNPKLSIQNSASKFPTPKSRSTPKIRAAFSDPFVLQIAESLEDSLSSSSTSSPPP--LQ 68

Query: 379  KLRDTSSQSLLSVSWPTRKDEPFRFTDTTFIKNSQIKPVSVPSTPIPTHLNDTHFPSLVI 558
            KLRD SSQ++LS  WP+RKDEPFRFTDT+ I+ SQ+ P+S P T I     DT FP+L I
Sbjct: 69   KLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQVTPISHPPTSIAIS-TDTQFPNLSI 127

Query: 559  VDGHMVSS-SKISEFPDGVFIGRVSDIDSEIIKKSVFEFVSDFQDGDLFWSLNGIGTPDV 735
            VDGH+V S S +S+ P GVF+G +S + SE I K V EFV++F+ GDLFWSLNG+GTPD+
Sbjct: 128  VDGHIVYSLSNLSQLPTGVFVGSLSSLPSETITKKVSEFVANFE-GDLFWSLNGLGTPDM 186

Query: 736  TVVYVPSDCKVEDPLHLMFFSSESGDVGSNILPVSNPRVLVIVEKXXXXXXXXXHFDGDE 915
             VVYVP+ C+VE PLH++++S E GD+GS  LPVSNPRV V+VE+         +    E
Sbjct: 187  AVVYVPAGCRVEMPLHIVYYSVEGGDIGSKKLPVSNPRVFVLVEEGGEIGVIEEYVGVGE 246

Query: 916  SQCYWANSAVEVLIGEGGKVTHSYLQRQGPNSAHTKWTFVRQEASSTYKLVEISTGGKLS 1095
            ++CYWAN+  EV+IGEG KV HSY+Q Q  ++AH KWT V+Q +SS+Y+L+E+STGGKLS
Sbjct: 247  NKCYWANTVTEVVIGEGAKVKHSYIQSQSLSAAHIKWTSVQQGSSSSYELIEVSTGGKLS 306

Query: 1096 RHNLHVQQVGPETVTELSTFHLCVNEQTQDLHSRLVLDHPRGTSQQLHKCIVAHSSGQAV 1275
            RHN+++QQVGP+TVTELS FHL V +QTQDLHSRLVLDHPRG S+QLHKCIVAHS GQAV
Sbjct: 307  RHNVNIQQVGPDTVTELSAFHLSVGDQTQDLHSRLVLDHPRGYSRQLHKCIVAHSLGQAV 366

Query: 1276 FDGNVKVNRYAQQTNAGQLSRSLLLEPRATVNLKPNLQIIADDVKCSHGAAISDLEEDQL 1455
            FDGN+KVNRYAQ+T+AGQL+RSLLLEPRATVN+KPNLQIIADDVKCSHGAAISDLEE+QL
Sbjct: 367  FDGNIKVNRYAQRTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEENQL 426

Query: 1456 FYFRARGIDSKTARKALVLSFGAEVMGQLPYKSLRKKMEDHVKKLLEPAL 1605
            FYF ARGID +TARKAL+ SFG EV+ +LPY S+RKK+E H+K LLEP L
Sbjct: 427  FYFLARGIDLETARKALIFSFGGEVIERLPYSSIRKKVETHIKALLEPTL 476


>ref|XP_003631753.1| PREDICTED: LOW QUALITY PROTEIN: protein ABCI7, chloroplastic-like
            [Vitis vinifera]
          Length = 527

 Score =  562 bits (1448), Expect = e-157
 Identities = 291/474 (61%), Positives = 355/474 (74%), Gaps = 16/474 (3%)
 Frame = +1

Query: 226  LSNPRLQSRTQLAIHP---------IRATLSDPLVLQIAEALEDXXXXXXXXXXXXXXLQ 378
            L NP+L  +T  +  P         IRAT SDP V QIAE+LED              LQ
Sbjct: 11   LLNPKLSIQTSASKFPTPKSRSTPKIRATFSDPFVPQIAESLEDSLSSSSTSSPPP--LQ 68

Query: 379  KLRDTSSQSLLSVSWPTRKDEPFRFTDTTFIKNSQIKPVSVPSTPIPTHLNDTHFPSLVI 558
            KLRD SSQ++LS  WP+RKDEPFRFTDT+ I+ SQ+ P+S P T I     DT FP+L I
Sbjct: 69   KLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQVTPISHPPTSIAIS-TDTQFPNLCI 127

Query: 559  VDGHMVSS-SKISEFPDGVFIGRVSDIDSEIIKKSVFEFVSDFQDGDLFWSLNGIGTPDV 735
            VDGH++ S S +S+ P GVF+G +S + SE I K V EFV++F+ GDLFWSLNG+GT D+
Sbjct: 128  VDGHIIYSLSNLSQLPTGVFVGSLSSLPSETITKRVSEFVANFE-GDLFWSLNGLGTLDM 186

Query: 736  TVVYVPSDCKVEDPLHLMFFSSESGDVGSNILPVSNPRVLVIVEKXXXXXXXXXHFDGDE 915
             VVYVP+ C+VE PLH+++ S E GD+G   LPVSNPRV V+VE+            G E
Sbjct: 187  VVVYVPAGCRVEMPLHIVYXSVEGGDIGFKKLPVSNPRVFVLVEEGGEIGEIEEFVGGGE 246

Query: 916  SQCYWANSAVEV------LIGEGGKVTHSYLQRQGPNSAHTKWTFVRQEASSTYKLVEIS 1077
            ++CYWAN+  EV      +IGEG KV HSY+Q Q  ++AH KWT V+Q +S +Y+L+E+S
Sbjct: 247  NKCYWANAVTEVRIIIILVIGEGAKVKHSYIQSQSLSAAHIKWTSVQQGSSGSYELIEVS 306

Query: 1078 TGGKLSRHNLHVQQVGPETVTELSTFHLCVNEQTQDLHSRLVLDHPRGTSQQLHKCIVAH 1257
            TGGKLSRHN+++QQVGP+TVTELS FHL V + TQDLH+RLVLDHPRG  +QLHKCIVAH
Sbjct: 307  TGGKLSRHNVNIQQVGPDTVTELSAFHLSVGDPTQDLHTRLVLDHPRGYFRQLHKCIVAH 366

Query: 1258 SSGQAVFDGNVKVNRYAQQTNAGQLSRSLLLEPRATVNLKPNLQIIADDVKCSHGAAISD 1437
            S GQAVFDGN+KVNRYAQQT+AGQL+RSLLLEPRATVN+KPNLQIIADDVKCSHGAAISD
Sbjct: 367  SLGQAVFDGNIKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISD 426

Query: 1438 LEEDQLFYFRARGIDSKTARKALVLSFGAEVMGQLPYKSLRKKMEDHVKKLLEP 1599
            LEE+QLFYF ARGID +TARK L+ SFG EV+ +LPY S+RKK+E H+K LLEP
Sbjct: 427  LEENQLFYFLARGIDLETARKTLIFSFGDEVIERLPYSSIRKKVETHIKALLEP 480


>ref|XP_002326712.1| predicted protein [Populus trichocarpa] gi|222834034|gb|EEE72511.1|
            predicted protein [Populus trichocarpa]
          Length = 456

 Score =  557 bits (1435), Expect = e-156
 Identities = 289/451 (64%), Positives = 350/451 (77%), Gaps = 6/451 (1%)
 Frame = +1

Query: 259  LAIHPI-RATLSDPLVLQIAEALEDXXXXXXXXXXXXXXLQKLRDTSSQSLLSVSWPTRK 435
            L+  PI +A+ SDP VLQ+AE LED              LQ+LRD+SS+SLLS SWP+RK
Sbjct: 13   LSTTPITQASFSDPFVLQLAETLEDSLSPSVS-------LQRLRDSSSESLLSTSWPSRK 65

Query: 436  DEPFRFTDTTFIKNSQIKPVSVPSTP--IPTHLNDTHFPSLVIVDGHMVSS-SKISEFPD 606
            DEPFRFTDT+FI+ SQI P++ P     +P+   DT  PS+VI DG +++S SK+S  PD
Sbjct: 66   DEPFRFTDTSFIRLSQIVPITKPPQLDYLPSINEDTLLPSIVIADGFVLNSMSKLSTLPD 125

Query: 607  GVFIGRVSDIDSEIIKKSVFEFVSDFQDGDLFWSLNGIGTPDVTVVYVPSDCKVEDPLHL 786
            GV++G +    S+ I + V EFV DF+ GDLFWS+NG+G  D+TVVYVP+  KVE+P+H 
Sbjct: 126  GVYVGSLLSDSSDRIAERVLEFVGDFEWGDLFWSINGLGAHDMTVVYVPAGVKVENPIHF 185

Query: 787  MFFSSESGDVGSNILPVSNPRVLVIVEKXXXXXXXXXHF--DGDESQCYWANSAVEVLIG 960
             + S E G+ GS  LPVSNPRV V+VE+             +G++ + YWAN  +EV+IG
Sbjct: 186  KYVSVEGGEKGSKKLPVSNPRVFVVVEEGGEVGIIEEFVSKEGNDDRYYWANPVLEVVIG 245

Query: 961  EGGKVTHSYLQRQGPNSAHTKWTFVRQEASSTYKLVEISTGGKLSRHNLHVQQVGPETVT 1140
            +G KV HSY+Q Q  NSAH KWT VRQEA+STY+LVE+STGGKLSRHNLHVQQ+GP+T T
Sbjct: 246  KGAKVRHSYVQSQSLNSAHIKWTAVRQEAASTYELVEVSTGGKLSRHNLHVQQLGPDTAT 305

Query: 1141 ELSTFHLCVNEQTQDLHSRLVLDHPRGTSQQLHKCIVAHSSGQAVFDGNVKVNRYAQQTN 1320
            ELSTFHL V +QTQDLHSRL+LDHPRG SQQLHKCIVAHS GQAVFDGNVKVNRYAQQT+
Sbjct: 306  ELSTFHLSVGDQTQDLHSRLILDHPRGRSQQLHKCIVAHSQGQAVFDGNVKVNRYAQQTD 365

Query: 1321 AGQLSRSLLLEPRATVNLKPNLQIIADDVKCSHGAAISDLEEDQLFYFRARGIDSKTARK 1500
            AGQL+RSLLLEPRATVN+KPNLQIIADDVKCSHGAAISDLEE QLFYF+ARGID +TARK
Sbjct: 366  AGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEETQLFYFQARGIDLETARK 425

Query: 1501 ALVLSFGAEVMGQLPYKSLRKKMEDHVKKLL 1593
            ALV SFGAEV+ +LP   ++K++E HVK LL
Sbjct: 426  ALVFSFGAEVIERLPNSFMQKQVESHVKGLL 456


Top