BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011374
         (1526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272768.1| PREDICTED: transcription elongation factor A...   416   e-113
ref|XP_002308256.1| predicted protein [Populus trichocarpa] gi|2...   412   e-113
ref|XP_002323085.1| predicted protein [Populus trichocarpa] gi|2...   401   e-109
ref|XP_002528699.1| transcription elongation factor s-II, putati...   387   e-105
ref|XP_004138392.1| PREDICTED: transcription elongation factor A...   378   e-102

>ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
            vinifera]
          Length = 367

 Score =  416 bits (1068), Expect = e-113
 Identities = 214/340 (62%), Positives = 255/340 (75%), Gaps = 4/340 (1%)
 Frame = +2

Query: 251  RCVDALKQLKKVPVTMKVLVETQVGKRLRHLTKHPREKIRAVASDLLEIWKKIVVXXXXX 430
            RCVDALKQLK  PVT + L  TQVGKRLRHLTKHP+ KI+++ASDLLE+WKK+V+     
Sbjct: 33   RCVDALKQLKSFPVTYEALASTQVGKRLRHLTKHPKGKIQSLASDLLEMWKKVVIDETRN 92

Query: 431  XXXXXXXXXRTA----TKAETVKVEKVQGADSVMVEKVSRSETIKVEKSDRNGIIKSEKV 598
                      +A    +K ETVKVE    A  V VEK S+ ET+K+EK DR    K   V
Sbjct: 93   KKNGGLDNNGSAKAEVSKTETVKVEMAHKAGGVKVEKASKVETVKIEKFDRGSSTKPGSV 152

Query: 599  SRSXXXXXXXXXXXXXXXIPKQEKDDSVKKLQAATPKGPPKLTSMIKSNDSFRDKTRELL 778
            SRS               + ++++  SVKK   A+  GPPKLT+MIK ND+ RDK RELL
Sbjct: 153  SRSETIKVEKRVEN----VDERKQFSSVKKPPQAS-NGPPKLTAMIKCNDALRDKVRELL 207

Query: 779  AEALSRVSNEAEEYISNEVNACDPIRAAVLVESALFDKLGRSNGPQKNKYRSIMFNLRDQ 958
            AEAL +V++EA+E I +EVNACDPIR AV VES +F+K+GRSNG QK KYRSIMFN++D 
Sbjct: 208  AEALFKVASEADEDIKDEVNACDPIRVAVSVESVMFEKMGRSNGTQKFKYRSIMFNIKDP 267

Query: 959  NNPDLRRRVLLGQVKPERLLTMTPEEMASDQRRQENNQIREKTLFDCERAGAAKATTDQF 1138
            NNPDLRR+VLLG+VKP+RL+ M+PEEMAS+QR++EN+QI+EK LFDCER G  KATTDQF
Sbjct: 268  NNPDLRRKVLLGEVKPDRLINMSPEEMASNQRQRENSQIKEKALFDCERGGPPKATTDQF 327

Query: 1139 KCGRCQQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 1258
            KCGRC QRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 328  KCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 367


>ref|XP_002308256.1| predicted protein [Populus trichocarpa] gi|222854232|gb|EEE91779.1|
            predicted protein [Populus trichocarpa]
          Length = 352

 Score =  412 bits (1060), Expect = e-113
 Identities = 210/339 (61%), Positives = 257/339 (75%), Gaps = 3/339 (0%)
 Frame = +2

Query: 251  RCVDALKQLKKVPVTMKVLVETQVGKRLRHLTKHPREKIRAVASDLLEIWKKIVVXXXXX 430
            RCVD+LKQL+K  VT ++LV TQVGK+LR L KHP+EKIRAVASDLLE+WKK+V+     
Sbjct: 33   RCVDSLKQLRKFKVTSELLVSTQVGKKLRPLAKHPKEKIRAVASDLLEMWKKMVIDETRK 92

Query: 431  XXXXXXXXXRT---ATKAETVKVEKVQGADSVMVEKVSRSETIKVEKSDRNGIIKSEKVS 601
                           +K+ETVKVEK++    V VE+ S SET+KVEK D++  +K EK+S
Sbjct: 93   KNGSIDSKSSVKAEVSKSETVKVEKLRKTSVVKVERASTSETVKVEKMDQDKTVKVEKMS 152

Query: 602  RSXXXXXXXXXXXXXXXIPKQEKDDSVKKLQAATPKGPPKLTSMIKSNDSFRDKTRELLA 781
                               KQE   S  K  + +P GPPKL +++K ND+ RDK RELLA
Sbjct: 153  -------------------KQEIQTSSVKQPSQSPIGPPKLKTLVKCNDALRDKIRELLA 193

Query: 782  EALSRVSNEAEEYISNEVNACDPIRAAVLVESALFDKLGRSNGPQKNKYRSIMFNLRDQN 961
            EALS+V++EA+E I +EV ACDPIR AV VES +F+KLGRSNG QK KYRSIMFN++DQN
Sbjct: 194  EALSKVASEADEDIRDEVEACDPIRVAVSVESMMFEKLGRSNGAQKLKYRSIMFNIKDQN 253

Query: 962  NPDLRRRVLLGQVKPERLLTMTPEEMASDQRRQENNQIREKTLFDCERAGAAKATTDQFK 1141
            NPD RR+VLLG+V+PERL+TM PEEMAS+QR++ENNQI+EK LFDCER+G A+ATTDQFK
Sbjct: 254  NPDFRRKVLLGEVQPERLVTMGPEEMASEQRKRENNQIKEKVLFDCERSGQAQATTDQFK 313

Query: 1142 CGRCQQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 1258
            CGRC+QRK TYYQ+QTRSADEPMTT+VTCVNCNNHWKFC
Sbjct: 314  CGRCRQRKCTYYQMQTRSADEPMTTYVTCVNCNNHWKFC 352


>ref|XP_002323085.1| predicted protein [Populus trichocarpa] gi|222867715|gb|EEF04846.1|
            predicted protein [Populus trichocarpa]
          Length = 334

 Score =  401 bits (1031), Expect = e-109
 Identities = 210/336 (62%), Positives = 252/336 (75%)
 Frame = +2

Query: 251  RCVDALKQLKKVPVTMKVLVETQVGKRLRHLTKHPREKIRAVASDLLEIWKKIVVXXXXX 430
            RCVD+LKQL+K  VT ++LV TQVGK+LR L KHP++KIRAVASDLLE WKKIV+     
Sbjct: 33   RCVDSLKQLRKFKVTSEILVSTQVGKKLRPLAKHPKDKIRAVASDLLETWKKIVIDETMR 92

Query: 431  XXXXXXXXXRTATKAETVKVEKVQGADSVMVEKVSRSETIKVEKSDRNGIIKSEKVSRSX 610
                         K  TVKVEK+Q    V   KVS SET+KVEK D++   K+ KV+++ 
Sbjct: 93   K------------KNATVKVEKLQKTSMV---KVSTSETVKVEKMDQD---KTVKVAQTC 134

Query: 611  XXXXXXXXXXXXXXIPKQEKDDSVKKLQAATPKGPPKLTSMIKSNDSFRDKTRELLAEAL 790
                            K+E   S  K  +  P GPPKL +++K ND+ RDK RELLAEAL
Sbjct: 135  ----------------KEEIQTSSVKKPSQAPTGPPKLKTLVKCNDALRDKIRELLAEAL 178

Query: 791  SRVSNEAEEYISNEVNACDPIRAAVLVESALFDKLGRSNGPQKNKYRSIMFNLRDQNNPD 970
            S+V++EA+E I +EV ACDPIR AV VESA+F+KLGRSNG QK KYRSIMFN++DQNNPD
Sbjct: 179  SKVASEADEDIRDEVEACDPIRVAVSVESAMFEKLGRSNGAQKMKYRSIMFNIKDQNNPD 238

Query: 971  LRRRVLLGQVKPERLLTMTPEEMASDQRRQENNQIREKTLFDCERAGAAKATTDQFKCGR 1150
            LRR+VLLGQV+P+RL+TM PEEMAS+QR++ENNQI+EK LFDCER G A+ATTDQFKCGR
Sbjct: 239  LRRKVLLGQVQPQRLVTMPPEEMASEQRKRENNQIKEKALFDCERGGKAEATTDQFKCGR 298

Query: 1151 CQQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 1258
            C QRK TYYQ+QTRSADEPMTT+VTCVNCNNHWKFC
Sbjct: 299  CGQRKCTYYQMQTRSADEPMTTYVTCVNCNNHWKFC 334


>ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
            gi|223531871|gb|EEF33688.1| transcription elongation
            factor s-II, putative [Ricinus communis]
          Length = 342

 Score =  387 bits (995), Expect = e-105
 Identities = 205/340 (60%), Positives = 244/340 (71%), Gaps = 4/340 (1%)
 Frame = +2

Query: 251  RCVDALKQLKKVPVTMKVLVETQVGKRLRHLTKHPREKIRAVASDLLEIWKKIVVXXXXX 430
            RCVDALKQLK  P++  +LV +QVGKRLR LTKHPREKI+ VASDLLE+WKKIV+     
Sbjct: 33   RCVDALKQLKIFPISYDILVSSQVGKRLRPLTKHPREKIQTVASDLLEMWKKIVIDETTR 92

Query: 431  XXXXXXXXXRTA----TKAETVKVEKVQGADSVMVEKVSRSETIKVEKSDRNGIIKSEKV 598
                      +     +K ET+KVEKVQ A +V VEK+ R  T+KVEK       KSE+ 
Sbjct: 93   KKNGTVDNKSSVKAEVSKVETIKVEKVQKASTVKVEKIDRERTVKVEK-------KSEE- 144

Query: 599  SRSXXXXXXXXXXXXXXXIPKQEKDDSVKKLQAATPKGPPKLTSMIKSNDSFRDKTRELL 778
                                KQ+  D  K  QA+    PPKLT+++K ND+ RDK RELL
Sbjct: 145  --------------------KQQAIDVKKPSQASVT--PPKLTAIVKCNDALRDKIRELL 182

Query: 779  AEALSRVSNEAEEYISNEVNACDPIRAAVLVESALFDKLGRSNGPQKNKYRSIMFNLRDQ 958
             EALS+V +EA E   +E++ CDPIR AV VESA+F+K+GRSNG QK KYRSIMFNL+D 
Sbjct: 183  VEALSKVVSEANEDGRDEISKCDPIRVAVSVESAMFEKMGRSNGAQKFKYRSIMFNLKDP 242

Query: 959  NNPDLRRRVLLGQVKPERLLTMTPEEMASDQRRQENNQIREKTLFDCERAGAAKATTDQF 1138
            NNPDLRR+VLLG+VKPERL++MTPEEMAS +R++E NQI+EK LFDCER G AKATTDQF
Sbjct: 243  NNPDLRRKVLLGEVKPERLISMTPEEMASKERQEEINQIKEKALFDCERGGPAKATTDQF 302

Query: 1139 KCGRCQQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 1258
            KC RC QRK TYYQ+QTRSADEPMTT+VTCVNCN HWKFC
Sbjct: 303  KCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCNKHWKFC 342


>ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like [Cucumis
            sativus]
          Length = 369

 Score =  378 bits (970), Expect = e-102
 Identities = 202/350 (57%), Positives = 242/350 (69%), Gaps = 14/350 (4%)
 Frame = +2

Query: 251  RCVDALKQLKKVPVTMKVLVETQVGKRLRHLTKHPREKIRAVASDLLEIWKKIVVXXXXX 430
            RC+DAL+QLKK PVT ++LV TQVGKRLRHLTKHP++KI+  ASDL+E+WK+IV+     
Sbjct: 32   RCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKHPKKKIQEHASDLIEMWKEIVIKETNK 91

Query: 431  XXXXXXXXXRTATK-----AETVKVEKVQGADSVMVEKVSRSETIKVEKSDRNGIIKSEK 595
                     + + K     AE+VKVEK Q + S+ VE+VS     KVE+ DRNG   S K
Sbjct: 92   NKKNGNASSKDSPKIGSPSAESVKVEKFQKSSSMKVERVS-----KVEQFDRNGATSSVK 146

Query: 596  VSRSXXXXXXXXXXXXXXXIPKQEKDDSVKKLQAATPK---------GPPKLTSMIKSND 748
             S+S                 K EK DS+ K++    +          PPKLTSMIKS D
Sbjct: 147  YSKSESVVSERNSV-------KVEKTDSMVKVERVVKEEKKPSSGAAAPPKLTSMIKSKD 199

Query: 749  SFRDKTRELLAEALSRVSNEAEEYISNEVNACDPIRAAVLVESALFDKLGRSNGPQKNKY 928
            + RDK RELL EA S+V  EA+E   +EVNA DPIR AV VES +F+  G S G QK KY
Sbjct: 200  AARDKIRELLFEAFSKVPGEADEEFMDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKY 259

Query: 929  RSIMFNLRDQNNPDLRRRVLLGQVKPERLLTMTPEEMASDQRRQENNQIREKTLFDCERA 1108
            RSIMFNL+D  NPD RR+VLLG +KPER++ M+  +MASDQR++EN +I +K LFDCER 
Sbjct: 260  RSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTADMASDQRKRENEEIAQKALFDCERG 319

Query: 1109 GAAKATTDQFKCGRCQQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 1258
            GA KATTDQFKCGRC QRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 320  GAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 369