BLASTX nr result

ID: Cimicifuga21_contig00011344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011344
         (1410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94731.1| unknown [Populus trichocarpa]                          192   2e-46
ref|XP_002326894.1| NAC domain protein, IPR003441 [Populus trich...   190   9e-46
ref|XP_002510344.1| conserved hypothetical protein [Ricinus comm...   188   3e-45
ref|XP_002283395.1| PREDICTED: uncharacterized protein LOC100252...   169   2e-39
gb|ADL36792.1| NAC domain class transcription factor [Malus x do...   147   7e-33

>gb|ABK94731.1| unknown [Populus trichocarpa]
          Length = 415

 Score =  192 bits (488), Expect = 2e-46
 Identities = 141/395 (35%), Positives = 193/395 (48%), Gaps = 28/395 (7%)
 Frame = +2

Query: 140  TMCPSEPVSPPADIGVHWSDEEVVMSMRKFAHGGPLPANVLADFSPYNVDPWNLPDGSWF 319
            TMCP    SP ADI  H  DEE+ M + K   G PLP NV+ D +PY   P NLP+  W+
Sbjct: 30   TMCPPAS-SPVADIDFHCRDEELFMFLYKLTSGSPLPGNVITDVNPYIYAPSNLPEDIWY 88

Query: 320  FFNSEGPKATETGYWKVTGKCRTIYTNTNTTASRLTLEFYLGQAPHGRNSNWVMYDYRIN 499
                +    T  G+WKV G+   +++N+  T  R T EF+ GQ PH R ++W+M +Y I 
Sbjct: 89   LLRVKENDDTGLGFWKVKGEACKLFSNSAITGWRTTFEFFEGQVPHERKTDWLMQEYWIT 148

Query: 500  QRLY-EIGKDKDSRSLSRVVFNCSGSSNHEAQKGNDAKGMSDMLNIENNQ---------T 649
            Q+ + E  K K++RSL RV      + +HE Q    A   SD  +I+  Q         T
Sbjct: 149  QKEHIEKRKAKEARSLCRVFLGGEQALDHENQL--IASPHSD-THIDLTQSIGPGTLADT 205

Query: 650  SHNSTSGSQVKRDDEHGHLEVSNKHQEDPKSDNAAEDPNAIYFSTGDYFELHDLDXXXXX 829
            SH S+S  +V +DDE  ++  + +    P +   A  P    FS GDY EL DLD     
Sbjct: 206  SHGSSSNPEVNKDDETENMVATGR----PPNLPVANLPEIDCFSRGDYLELLDLDNPASR 261

Query: 830  XXXXXXXRCPSISSHEYFDSEALLRDLDSGKDQDTEKKKYTDSKFSVSAPIRLVQVVLGP 1009
                    C ++SS EYFDS ALLRDL+S  +Q   +K   D K SV+A +R  +VV+ P
Sbjct: 262  SSSSDNSSCMTMSSDEYFDSIALLRDLESESNQALAQKD-KDCKLSVAASLRPDEVVVLP 320

Query: 1010 ESLGS--------------DRCILRNGENHVQNSFLPPVAINQNA----EASETAKEVAS 1135
             S GS              D  I  NG   +    +     NQ A    E   +      
Sbjct: 321  ASHGSYISNEGGKPHAVETDSSINGNGHRDLD---IQQAVRNQGANHWGEGPSSNFHAVG 377

Query: 1136 LSTGIYAATLADGESKTVMSRMQKVRKKYWCFMPF 1240
             S+G + A+  D E K    R +K +KKY CF+PF
Sbjct: 378  ASSGGHVAS-PDEEEKAARRRRKKSKKKYLCFVPF 411


>ref|XP_002326894.1| NAC domain protein, IPR003441 [Populus trichocarpa]
            gi|222835209|gb|EEE73644.1| NAC domain protein, IPR003441
            [Populus trichocarpa]
          Length = 385

 Score =  190 bits (482), Expect = 9e-46
 Identities = 140/394 (35%), Positives = 192/394 (48%), Gaps = 28/394 (7%)
 Frame = +2

Query: 143  MCPSEPVSPPADIGVHWSDEEVVMSMRKFAHGGPLPANVLADFSPYNVDPWNLPDGSWFF 322
            MCP    SP ADI  H  DEE+ M + K   G PLP NV+ D +PY   P NLP+  W+ 
Sbjct: 1    MCPPAS-SPVADIDFHCRDEELFMFLYKLTSGSPLPGNVITDVNPYIYAPSNLPEDIWYL 59

Query: 323  FNSEGPKATETGYWKVTGKCRTIYTNTNTTASRLTLEFYLGQAPHGRNSNWVMYDYRINQ 502
               +    T  G+WKV G+   +++N+  T  R T EF+ GQ PH R ++W+M +Y I Q
Sbjct: 60   LRVKENDDTGLGFWKVKGEACKLFSNSAITGWRTTFEFFEGQVPHERKTDWLMQEYWITQ 119

Query: 503  RLY-EIGKDKDSRSLSRVVFNCSGSSNHEAQKGNDAKGMSDMLNIENNQ---------TS 652
            + + E  K K++RSL RV      + +HE Q    A   SD  +I+  Q         TS
Sbjct: 120  KEHIEKRKAKEARSLCRVFLGGEQALDHENQL--IASPHSD-THIDLTQSIGPGTLADTS 176

Query: 653  HNSTSGSQVKRDDEHGHLEVSNKHQEDPKSDNAAEDPNAIYFSTGDYFELHDLDXXXXXX 832
            H S+S  +V +DDE  ++  + +    P +   A  P    FS GDY EL DLD      
Sbjct: 177  HGSSSNPEVNKDDETENMVATGR----PPNLPVANLPEIDCFSRGDYLELLDLDNPASRS 232

Query: 833  XXXXXXRCPSISSHEYFDSEALLRDLDSGKDQDTEKKKYTDSKFSVSAPIRLVQVVLGPE 1012
                   C ++SS EYFDS ALLRDL+S  +Q   +K   D K SV+A +R  +VV+ P 
Sbjct: 233  SSSDNSSCMTMSSDEYFDSIALLRDLESESNQALAQKD-KDCKLSVAASLRPDEVVVLPA 291

Query: 1013 SLGS--------------DRCILRNGENHVQNSFLPPVAINQNA----EASETAKEVASL 1138
            S GS              D  I  NG   +    +     NQ A    E   +       
Sbjct: 292  SHGSYIRNEGGKPHAVETDSSINGNGHRDLD---IQRAVRNQGANHWGEGPSSNFHAVGA 348

Query: 1139 STGIYAATLADGESKTVMSRMQKVRKKYWCFMPF 1240
            S+G + A+  D E K    R +K +KKY CF+PF
Sbjct: 349  SSGGHVAS-PDEEEKAARRRRKKSKKKYLCFVPF 381


>ref|XP_002510344.1| conserved hypothetical protein [Ricinus communis]
            gi|223551045|gb|EEF52531.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 388

 Score =  188 bits (477), Expect = 3e-45
 Identities = 128/388 (32%), Positives = 192/388 (49%), Gaps = 27/388 (6%)
 Frame = +2

Query: 158  PVSPPADIGVHWSDEEVVMSMRKFAHGGPLPANVLADFSPYNVDPWNLPDGSWFFFNSEG 337
            P +P  DIG++ + EE+ +S+ K AHG PLP NV+ D +PYN  P  LP G W+   S+ 
Sbjct: 4    PPNPVPDIGLNSTAEELFISLEKMAHGYPLPNNVITDVNPYNYSPSYLPQGIWYLIRSKE 63

Query: 338  PKATETGYWKVTGKCRTIYTNTNTTASRLTLEFYLGQAPHGRNSNWVMYDYRINQR-LYE 514
              AT+ G+WKV G+   +++ +  T    TLEF+ GQ P  R +NW M +Y I Q+   E
Sbjct: 64   NGATDLGFWKVKGEASKLFSTSYITGWMTTLEFFEGQVPRERKTNWQMQEYWITQKGPGE 123

Query: 515  IGKDKDSRSLSRVVFNCSGSSNHEAQKGNDAKGMSDMLNIE---------NNQTSHNSTS 667
              K K++ SL RV        +++ ++   +  ++D   +          NN TS+ STS
Sbjct: 124  NSKKKETSSLCRVFLGGEQGLDYQKRQEMASLHIADHTLVHSTESIVLKANNGTSNGSTS 183

Query: 668  GSQVKRDDEHGHLEVSNKHQEDPKSDNAAEDPNAIYFSTGDYFELHDLDXXXXXXXXXXX 847
               V +DDE G + V+     +P +      P   YF  GDY EL DLD           
Sbjct: 184  KHVVDKDDETGVVAVTG----EPPNYLVENQPEIDYFPRGDYLELLDLDNPASPSSSSDN 239

Query: 848  XRCPSISSHEYFDSEALLRDLDSGKDQDTEKKKYTDSKFSVSAPIRLVQVVLGPES-LGS 1024
              C ++SS EYFDS ALLR+LDS  +QD  +K   + KFS+S   +  +V++ P S +GS
Sbjct: 240  SSCLTMSSDEYFDSLALLRELDSESNQDLVQKN-ENCKFSISVSFKPNEVLMVPASPVGS 298

Query: 1025 DRCILRNGENHVQNSFLPPVAINQNA---------------EASETAKEVASLSTGIYAA 1159
                  + +  +      P  ++ N                E    + +  + S+  + +
Sbjct: 299  LSSNEESRQGILGTGLSLPALVDDNENLVDVVRSQKADYRDEGPSNSHDAGTSSSRQHPS 358

Query: 1160 TLADGESKTVMSRMQKVRK-KYWCFMPF 1240
               DGE K    R +K+RK KY CFMPF
Sbjct: 359  --QDGERKAAKGRKKKLRKNKYSCFMPF 384


>ref|XP_002283395.1| PREDICTED: uncharacterized protein LOC100252228 [Vitis vinifera]
          Length = 383

 Score =  169 bits (427), Expect = 2e-39
 Identities = 130/397 (32%), Positives = 187/397 (47%), Gaps = 34/397 (8%)
 Frame = +2

Query: 152  SEPVSPPADIGVHWSDEEVVMSMRKFAHGGPLPANVLADFSPYNVDPWNLPDGSWFFFNS 331
            S  VSPP +I ++WSDEE+   ++   +G PLP NV+ + +PY  +P  L D  W+  +S
Sbjct: 4    SPSVSPPNEISLYWSDEELFTCLQGMINGSPLPDNVMIEVNPYQHNPSCLSDRFWYLTSS 63

Query: 332  EGPKATETGYWKVTGKCRTIYTNTNTTASRLTLEFYLGQAPHGRNSNWVMYDYRINQRLY 511
            E  K  E G+WK  G+   I++N++ T  R T EFY G  PH   ++WV+  Y+I Q+  
Sbjct: 64   EDTKFAE-GFWKPKGEPYEIFSNSSITGWRTTFEFYEGTTPHVLKTDWVLQQYKITQK-- 120

Query: 512  EIGKDKD-----SRSLSRVVFNCSGSSNHEAQKGNDAKGMSD---------MLNIENNQT 649
              G+ K+     S SL RV  +   SS+HE QK      ++D         +++  +N T
Sbjct: 121  --GQSKNIKPMASSSLCRVFQSRGQSSSHEMQKELGVANVADENHTCSKPSVVSNTDNST 178

Query: 650  SHNSTSGSQVKRDDEHGHLEVSNKHQEDPKSDNAAEDPNAIYFSTGDYFELHDLDXXXXX 829
               S S SQV+  +    L  + +   +   DN    P   YFS GD+ EL DL      
Sbjct: 179  GQGSKSESQVQHGNGETGLLAAPERSLNHPVDNL---PEIDYFSDGDFLELGDLADPVSP 235

Query: 830  XXXXXXXRCPSISSHEYFDSEALLRDLDSGKDQDTEKKKYTDSKFSVSAPIRLVQVVLGP 1009
                    C S +S E FDS ALLRDL+  KD           KFSV+A +   +VVL P
Sbjct: 236  SSSSDNSSCLSQTSDECFDSLALLRDLECDKD--------VGCKFSVAALVMPDKVVLQP 287

Query: 1010 ESLGSDRC-----ILRNGENHVQNSFLPPVAINQ---------NAEASETAKEVAS---- 1135
             S GS  C     +   G     +S L    +++           EA    +  +S    
Sbjct: 288  ASSGSLTCDDRRKLPAEGPPKTDSSLLGSTKLSEKKGLKRAIATQEADNKVEGPSSNPHN 347

Query: 1136 --LSTGIYAATLADGESKTVMSRMQKVRKKYWCFMPF 1240
               S+G   A  +D + K    R +K+ KKY CFMPF
Sbjct: 348  LVASSGSNKAASSDEKGKAAADRKKKL-KKYLCFMPF 383


>gb|ADL36792.1| NAC domain class transcription factor [Malus x domestica]
          Length = 359

 Score =  147 bits (371), Expect = 7e-33
 Identities = 113/368 (30%), Positives = 168/368 (45%), Gaps = 11/368 (2%)
 Frame = +2

Query: 170  PADIGVHWSDEEVVMSMRKFAHGGPLPANVLADFSPYNVDPWNLPDGSWFFFNSEGPKAT 349
            PADI +  +DEE+ +S+ K   G PLP NV+ D +PY   P NLPDG W+F  S     T
Sbjct: 9    PADISLQCTDEELCVSLEKIQDGSPLPGNVIRDVNPYRCAPSNLPDGFWYFIRSSESNPT 68

Query: 350  ETGYWKVTGKCRTIYTNTNTTASRLTLEFYLGQAPHGRNSNWVMYDYRINQ-RLYEIGKD 526
              G W+  G+   I++N++    R TLEFY GQAPH   +NWVM +Y I Q +  E  K 
Sbjct: 69   NIGQWRAKGEASRIFSNSSIYGWRATLEFYRGQAPHETKTNWVMQEYWITQKKSSESSKL 128

Query: 527  K----DSRSLSRVVF--NCSGSSNHEAQKGNDAKGMSDMLNIENNQTSHNSTSGSQVK-- 682
            K    D  SL RV    + + +SN   +  N  + +    ++        STS  +V+  
Sbjct: 129  KINVQDVGSLCRVFLRDDETPNSNKLQELVNSDRAIHSTHSVVPRVEDRGSTSKPRVENE 188

Query: 683  --RDDEHGHLEVSNKHQEDPKSDNAAEDPNAIYFSTGDYFELHDLDXXXXXXXXXXXXRC 856
               D E G L V+ +     + DN        Y S GDY EL DLD             C
Sbjct: 189  ASNDRETGTLVVTER--LPVRDDNVQIMHENDYLSRGDYLELLDLD-TPASHSFSSVSSC 245

Query: 857  PSISSHEYFDSEALLRDLDSGKDQDTEKKKYTDSKFSVSAPIRLVQVVLGPESLGSDRCI 1036
             ++SS E FDS ALL +L+    Q+          F+ S+         G      D+  
Sbjct: 246  LTMSSDECFDSLALLEELEPKSKQELVTNNNKLVVFASSS---------GSFDKSRDKER 296

Query: 1037 LRNGENHVQNSFLPPVAINQNAEASETAKEVASLSTGIYAATLADGESKTVMSRMQKVRK 1216
            +RN   +  +S    +    +++ +   ++    + G      ++ ++  V    +  RK
Sbjct: 297  IRNRSPNPGSSVCAKIVTENSSKNASRKQKSDDRNEG-----PSNSQNANVGGTKKLKRK 351

Query: 1217 KYWCFMPF 1240
            KY+CFMPF
Sbjct: 352  KYFCFMPF 359


Top