BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011336
         (1279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143762.1| PREDICTED: cytochrome b-c1 complex subunit R...   415   e-113
ref|XP_002271311.1| PREDICTED: cytochrome b-c1 complex subunit R...   413   e-113
ref|XP_004143763.1| PREDICTED: cytochrome b-c1 complex subunit R...   412   e-112
ref|XP_002304638.1| predicted protein [Populus trichocarpa] gi|2...   411   e-112
gb|AFK37420.1| unknown [Lotus japonicus]                              407   e-111

>ref|XP_004143762.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2,
            mitochondrial-like [Cucumis sativus]
            gi|449516924|ref|XP_004165496.1| PREDICTED: cytochrome
            b-c1 complex subunit Rieske-2, mitochondrial-like
            [Cucumis sativus]
          Length = 274

 Score =  415 bits (1067), Expect = e-113
 Identities = 204/249 (81%), Positives = 220/249 (88%)
 Frame = -1

Query: 1081 LSRNLISGETTSDDSGSVASHHGFSPRSNFFGSIRGFASDSLTSRPATGTTLDVPATVAA 902
            LS N+I   T S+D  S    H F  R +F  + RGFASD+LTS        DVPAT+AA
Sbjct: 27   LSHNIIDS-TDSNDFRSAGFFHTFPIRPHFDRNSRGFASDALTSTKENNLVPDVPATIAA 85

Query: 901  VKNPTSKIVYDSHNHERFPPGDPSKRAFAYFVLTGGRFVYASLIRLLVLKFVLSMSASKD 722
            VKNPTSKIVYD +NHERFPPGDPSKRAFAYFVL+GGRFVYASLIRLLVLKFVLSMSASKD
Sbjct: 86   VKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKD 145

Query: 721  VLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDAVRV 542
            VLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRTE+DIKLANSVD+G+LRDPQ+D  RV
Sbjct: 146  VLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDIGTLRDPQQDGERV 205

Query: 541  KDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSF 362
            KDPEWL+VVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYD+SGRIRKGPAPYNLEVPTY+F
Sbjct: 206  KDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTF 265

Query: 361  LEENKLLIG 335
            LE+NKLLIG
Sbjct: 266  LEDNKLLIG 274


>ref|XP_002271311.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2, mitochondrial
            [Vitis vinifera] gi|296085532|emb|CBI29264.3| unnamed
            protein product [Vitis vinifera]
          Length = 272

 Score =  413 bits (1061), Expect = e-113
 Identities = 206/250 (82%), Positives = 221/250 (88%)
 Frame = -1

Query: 1084 ILSRNLISGETTSDDSGSVASHHGFSPRSNFFGSIRGFASDSLTSRPATGTTLDVPATVA 905
            +LSR + S       S S++S H F+  S F   IRGF+S+SL      G   D+P TVA
Sbjct: 26   LLSR-IHSSNGGDGSSRSISSPHLFN--SEFRDLIRGFSSESLAPSHDLGMISDLPPTVA 82

Query: 904  AVKNPTSKIVYDSHNHERFPPGDPSKRAFAYFVLTGGRFVYASLIRLLVLKFVLSMSASK 725
            A+KNPTSKIVYD HNHERFPPGDPSKRAFAYFVLTGGRF+YASLIRLLVLKFVLSMSASK
Sbjct: 83   ALKNPTSKIVYDDHNHERFPPGDPSKRAFAYFVLTGGRFIYASLIRLLVLKFVLSMSASK 142

Query: 724  DVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDAVR 545
            DVLALAS+EVDLSSIEPG+TVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDAVR
Sbjct: 143  DVLALASIEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDAVR 202

Query: 544  VKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYS 365
            VKDPEWLIV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYD+SGRIRKGPAPYNLEVPTYS
Sbjct: 203  VKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYS 262

Query: 364  FLEENKLLIG 335
            FLEENKL+IG
Sbjct: 263  FLEENKLMIG 272


>ref|XP_004143763.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2,
            mitochondrial-like [Cucumis sativus]
            gi|449516922|ref|XP_004165495.1| PREDICTED: cytochrome
            b-c1 complex subunit Rieske-2, mitochondrial-like
            [Cucumis sativus]
          Length = 274

 Score =  412 bits (1058), Expect = e-112
 Identities = 204/248 (82%), Positives = 218/248 (87%)
 Frame = -1

Query: 1078 SRNLISGETTSDDSGSVASHHGFSPRSNFFGSIRGFASDSLTSRPATGTTLDVPATVAAV 899
            S N+I   T S+D  S    + F  RS F    RGFASD+L S    G  LD+PATVAAV
Sbjct: 28   SHNIIDS-TDSNDFRSAGFFNTFPIRSQFDRHSRGFASDALASTKDDGLILDIPATVAAV 86

Query: 898  KNPTSKIVYDSHNHERFPPGDPSKRAFAYFVLTGGRFVYASLIRLLVLKFVLSMSASKDV 719
            KNP+SKIVYD +NHERFPPGDPSKRAFAYFVL+GGRFVYASLIRLLVLKFVLSMSASKDV
Sbjct: 87   KNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDV 146

Query: 718  LALASLEVDLSSIEPGATVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDAVRVK 539
            LALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTEDDIKLANSVD+GSLRDPQ+D  RVK
Sbjct: 147  LALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQQDEERVK 206

Query: 538  DPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFL 359
            DPEWL+VVGVCTHLGCIPLPNAGD+GGWFCPCHGSHYD+SGRIRKGPAPYNLEVPTYSFL
Sbjct: 207  DPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYSFL 266

Query: 358  EENKLLIG 335
            E NKLLIG
Sbjct: 267  EGNKLLIG 274


>ref|XP_002304638.1| predicted protein [Populus trichocarpa] gi|222842070|gb|EEE79617.1|
            predicted protein [Populus trichocarpa]
          Length = 272

 Score =  411 bits (1056), Expect = e-112
 Identities = 211/277 (76%), Positives = 226/277 (81%), Gaps = 5/277 (1%)
 Frame = -1

Query: 1150 MLRVAGXXXXXXXXXXXXXXPTILSRN---LISGETTSDDSGSVAS--HHGFSPRSNFFG 986
            MLRVAG                 +S+N   L  G  ++  S S+ S  H  F+P      
Sbjct: 1    MLRVAGRRLSSLPWRCSQTTSAFVSQNSPFLSDGRDSAASSRSILSPYHLSFTP-----D 55

Query: 985  SIRGFASDSLTSRPATGTTLDVPATVAAVKNPTSKIVYDSHNHERFPPGDPSKRAFAYFV 806
             IRGF+S +LT     G   D+PATVAAVKNPTSKIVYD HNHER+PPGDPSKRAFAYFV
Sbjct: 56   LIRGFSSGALTPGQDMGIISDLPATVAAVKNPTSKIVYDEHNHERYPPGDPSKRAFAYFV 115

Query: 805  LTGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 626
            LTGGRFVYASLIRLLVLKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 116  LTGGRFVYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIR 175

Query: 625  RRTEDDIKLANSVDVGSLRDPQEDAVRVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCP 446
            RRTEDDIKLANSVDV SLRDPQEDA RVKDPEWL+VVGVCTHLGCIPLPNAGDFGGWFCP
Sbjct: 176  RRTEDDIKLANSVDVASLRDPQEDAARVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCP 235

Query: 445  CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 335
            CHGSHYDISGRIRKGPAP+NLEVPTYSFLEENKLL+G
Sbjct: 236  CHGSHYDISGRIRKGPAPFNLEVPTYSFLEENKLLVG 272


>gb|AFK37420.1| unknown [Lotus japonicus]
          Length = 273

 Score =  407 bits (1047), Expect = e-111
 Identities = 204/250 (81%), Positives = 217/250 (86%), Gaps = 1/250 (0%)
 Frame = -1

Query: 1081 LSRN-LISGETTSDDSGSVASHHGFSPRSNFFGSIRGFASDSLTSRPATGTTLDVPATVA 905
            LSRN L    +TSD+ GS      FS R  FF   RGFA++SL          ++PATVA
Sbjct: 28   LSRNPLAPPSSTSDERGS----DPFSLRPEFFLPFRGFATESLVHTKENSLIPEIPATVA 83

Query: 904  AVKNPTSKIVYDSHNHERFPPGDPSKRAFAYFVLTGGRFVYASLIRLLVLKFVLSMSASK 725
            AVKNP+SKIVYD HNHERFPPGDPSKRAF YFVLTGGRFVYASLIRLLVLKFVLSMSASK
Sbjct: 84   AVKNPSSKIVYDDHNHERFPPGDPSKRAFTYFVLTGGRFVYASLIRLLVLKFVLSMSASK 143

Query: 724  DVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDAVR 545
            DVLALASLEVDLSSIEPG  VTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQ+D+ R
Sbjct: 144  DVLALASLEVDLSSIEPGTIVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQQDSER 203

Query: 544  VKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYS 365
            VK+PEWLIV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTY+
Sbjct: 204  VKNPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYT 263

Query: 364  FLEENKLLIG 335
            FLEENKL+IG
Sbjct: 264  FLEENKLMIG 273