BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011335
         (1842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33534.3| unnamed protein product [Vitis vinifera]              573   e-161
ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containi...   573   e-161
ref|XP_002301697.1| predicted protein [Populus trichocarpa] gi|2...   559   e-157
ref|XP_002532468.1| pentatricopeptide repeat-containing protein,...   545   e-152
ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containi...   544   e-152

>emb|CBI33534.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  573 bits (1477), Expect = e-161
 Identities = 273/462 (59%), Positives = 352/462 (76%)
 Frame = -3

Query: 1645 KRPTFTSYLQTPNLPPKIKLLCEILANTPPLDVEKSLEDAGVRITTDDVEQVLKLSYGFP 1466
            KRP+F +YL+TPNL PK++LLCEI+ANTP   VE+ L D  +R++ +DVE  LKLSYGFP
Sbjct: 46   KRPSFPTYLETPNLSPKVRLLCEIIANTPSSTVEEVLHDTAIRVSPEDVEDSLKLSYGFP 105

Query: 1465 GPTVKFFRWAGKQLHDNHSPYSWNLVVDLLGKNLLFEAMWDAIKSMKKEGLLSLATFASV 1286
            G  VKFFRW+G QL+DNHSPYSWNLVVD+LGKN LF+AMWDA+KSMKK+GLLSLATFAS+
Sbjct: 106  GSAVKFFRWSGHQLNDNHSPYSWNLVVDMLGKNFLFDAMWDAVKSMKKQGLLSLATFASI 165

Query: 1285 FSSYVVADRVDEAIMTFEVMDQYGCPRDVIALNSLLSAICREGKTAKARDFLHVVKDKIR 1106
            FSSYV+ADRV EAIMTF+VM+QYGCPRD++ALNSLLSAICR+G+T +A +FL  V+  IR
Sbjct: 166  FSSYVIADRVREAIMTFDVMEQYGCPRDIVALNSLLSAICRDGRTVQAAEFLRNVRGLIR 225

Query: 1105 PDGDTYAILLEGWEGEGDAVNAHKTFGEMVILFGWDPVNGPAYDAFLNTLLKGHDGAHES 926
            PD DTYAILLEGWE EG+   A +TF EMV+  GWDP N  AYD+FLN LL G DG  E+
Sbjct: 226  PDADTYAILLEGWESEGNCGAARQTFDEMVMDIGWDPGNVSAYDSFLNALLHGPDGRREA 285

Query: 925  MKFFDVMKSNRCFPGMKFFRSALDEFIRTDRTREACALWETMARIKGCRPDTPMYNAMIS 746
            MKFF++M+  +C PGM+F+R  L E ++T  ++ A  LW+TM     CRPDT MYN+MI+
Sbjct: 286  MKFFEIMRDRQCSPGMRFYRIGLQECVKTSDSKGAQLLWQTMLSRNICRPDTEMYNSMIA 345

Query: 745  LQCYLNKIDVACQLLDDMVFYGAFPDSDTYNIXXXXXXXXXXXRDITVTFNEMLKNECIP 566
            L C  + I +A  +LD+MV  GAFPDS+TYN+            +    F+EM++NEC+P
Sbjct: 346  LHCSCDNIVMARGMLDEMVCNGAFPDSETYNVLFRFLIRRRKLEEAFSIFSEMVQNECVP 405

Query: 565  SQENCTSAITVYVDVGEPDMAIKVWKCMLENEMKGGMETIGNSFIVGLRDLNRLSEARKY 386
               NC +A+ +Y+D+G+   AIKVWK ++EN    G+E  GN  + GLRD +R+ EA KY
Sbjct: 406  DLTNCNAAVRIYLDLGDVYKAIKVWKYIIENH-DSGLEETGNLLVTGLRDHDRIPEAVKY 464

Query: 385  AEDAIDRGVKLSSNTLSKLKQSLTQLGKAYVYEELLRKWKSK 260
            A+D I RG+KL+S+TLSKLK +L ++GK  VY+ELLRKWK++
Sbjct: 465  AKDMIVRGIKLTSSTLSKLKHALVEVGKGPVYDELLRKWKTR 506


>ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Vitis vinifera]
          Length = 502

 Score =  573 bits (1477), Expect = e-161
 Identities = 273/462 (59%), Positives = 352/462 (76%)
 Frame = -3

Query: 1645 KRPTFTSYLQTPNLPPKIKLLCEILANTPPLDVEKSLEDAGVRITTDDVEQVLKLSYGFP 1466
            KRP+F +YL+TPNL PK++LLCEI+ANTP   VE+ L D  +R++ +DVE  LKLSYGFP
Sbjct: 42   KRPSFPTYLETPNLSPKVRLLCEIIANTPSSTVEEVLHDTAIRVSPEDVEDSLKLSYGFP 101

Query: 1465 GPTVKFFRWAGKQLHDNHSPYSWNLVVDLLGKNLLFEAMWDAIKSMKKEGLLSLATFASV 1286
            G  VKFFRW+G QL+DNHSPYSWNLVVD+LGKN LF+AMWDA+KSMKK+GLLSLATFAS+
Sbjct: 102  GSAVKFFRWSGHQLNDNHSPYSWNLVVDMLGKNFLFDAMWDAVKSMKKQGLLSLATFASI 161

Query: 1285 FSSYVVADRVDEAIMTFEVMDQYGCPRDVIALNSLLSAICREGKTAKARDFLHVVKDKIR 1106
            FSSYV+ADRV EAIMTF+VM+QYGCPRD++ALNSLLSAICR+G+T +A +FL  V+  IR
Sbjct: 162  FSSYVIADRVREAIMTFDVMEQYGCPRDIVALNSLLSAICRDGRTVQAAEFLRNVRGLIR 221

Query: 1105 PDGDTYAILLEGWEGEGDAVNAHKTFGEMVILFGWDPVNGPAYDAFLNTLLKGHDGAHES 926
            PD DTYAILLEGWE EG+   A +TF EMV+  GWDP N  AYD+FLN LL G DG  E+
Sbjct: 222  PDADTYAILLEGWESEGNCGAARQTFDEMVMDIGWDPGNVSAYDSFLNALLHGPDGRREA 281

Query: 925  MKFFDVMKSNRCFPGMKFFRSALDEFIRTDRTREACALWETMARIKGCRPDTPMYNAMIS 746
            MKFF++M+  +C PGM+F+R  L E ++T  ++ A  LW+TM     CRPDT MYN+MI+
Sbjct: 282  MKFFEIMRDRQCSPGMRFYRIGLQECVKTSDSKGAQLLWQTMLSRNICRPDTEMYNSMIA 341

Query: 745  LQCYLNKIDVACQLLDDMVFYGAFPDSDTYNIXXXXXXXXXXXRDITVTFNEMLKNECIP 566
            L C  + I +A  +LD+MV  GAFPDS+TYN+            +    F+EM++NEC+P
Sbjct: 342  LHCSCDNIVMARGMLDEMVCNGAFPDSETYNVLFRFLIRRRKLEEAFSIFSEMVQNECVP 401

Query: 565  SQENCTSAITVYVDVGEPDMAIKVWKCMLENEMKGGMETIGNSFIVGLRDLNRLSEARKY 386
               NC +A+ +Y+D+G+   AIKVWK ++EN    G+E  GN  + GLRD +R+ EA KY
Sbjct: 402  DLTNCNAAVRIYLDLGDVYKAIKVWKYIIENH-DSGLEETGNLLVTGLRDHDRIPEAVKY 460

Query: 385  AEDAIDRGVKLSSNTLSKLKQSLTQLGKAYVYEELLRKWKSK 260
            A+D I RG+KL+S+TLSKLK +L ++GK  VY+ELLRKWK++
Sbjct: 461  AKDMIVRGIKLTSSTLSKLKHALVEVGKGPVYDELLRKWKTR 502


>ref|XP_002301697.1| predicted protein [Populus trichocarpa] gi|222843423|gb|EEE80970.1|
            predicted protein [Populus trichocarpa]
          Length = 499

 Score =  559 bits (1441), Expect = e-157
 Identities = 273/461 (59%), Positives = 340/461 (73%)
 Frame = -3

Query: 1645 KRPTFTSYLQTPNLPPKIKLLCEILANTPPLDVEKSLEDAGVRITTDDVEQVLKLSYGFP 1466
            K+P+F SYL+TPNLPP IKLLCEI+ANTP  +VE  L+   +R+   DVEQVLKLSY  P
Sbjct: 35   KKPSFQSYLETPNLPPTIKLLCEIIANTPSHNVESVLDATVIRVKQTDVEQVLKLSYSSP 94

Query: 1465 GPTVKFFRWAGKQLHDNHSPYSWNLVVDLLGKNLLFEAMWDAIKSMKKEGLLSLATFASV 1286
            G  VKFFRWAG QL+D HSPYSWNLVVDLLGKN +F+AMW AIKSMK+E L+SLATFASV
Sbjct: 95   GSAVKFFRWAGLQLNDKHSPYSWNLVVDLLGKNSMFDAMWGAIKSMKRENLVSLATFASV 154

Query: 1285 FSSYVVADRVDEAIMTFEVMDQYGCPRDVIALNSLLSAICREGKTAKARDFLHVVKDKIR 1106
            FSSYV+ DRV EAIMTFEVMDQYGC R+V+ALNSLLSAICREG+T  A +FLHV K++I 
Sbjct: 155  FSSYVIVDRVKEAIMTFEVMDQYGCTRNVVALNSLLSAICREGRTFDAVEFLHVAKNRIL 214

Query: 1105 PDGDTYAILLEGWEGEGDAVNAHKTFGEMVILFGWDPVNGPAYDAFLNTLLKGHDGAHES 926
            PD D+YAILLEGWE E +  +A  TF +MV + GWDP N PAYD FL+TLL G+DG  E+
Sbjct: 215  PDADSYAILLEGWEKEMNVASARTTFADMVSMVGWDPRNVPAYDTFLSTLLMGYDGLREA 274

Query: 925  MKFFDVMKSNRCFPGMKFFRSALDEFIRTDRTREACALWETMARIKGCRPDTPMYNAMIS 746
            MK FD MK   CFPG+KFFR AL+E ++ +  R A  +WET+    G RPD  +YN MI 
Sbjct: 275  MKHFDTMKDRGCFPGVKFFRLALEECLKCNDVRAAMLIWETLVARVGFRPDIQLYNLMIG 334

Query: 745  LQCYLNKIDVACQLLDDMVFYGAFPDSDTYNIXXXXXXXXXXXRDITVTFNEMLKNECIP 566
            + CY N+ D+A + LD+M++ G FPDS TYN+           ++ +   NEM+KNE  P
Sbjct: 335  IHCYDNQTDIANKFLDEMIYNGVFPDSQTYNVLFQYLIKYKKLKEASFVLNEMIKNEFFP 394

Query: 565  SQENCTSAITVYVDVGEPDMAIKVWKCMLENEMKGGMETIGNSFIVGLRDLNRLSEARKY 386
            ++ NC +AI  Y+D  EP MAIKVWKCM+EN  +  +E  GN  +V LR  + + EA KY
Sbjct: 395  NKTNCNAAIKAYMDSKEPYMAIKVWKCMMENYGESDLEEAGNMLVVELRYHHMVPEAVKY 454

Query: 385  AEDAIDRGVKLSSNTLSKLKQSLTQLGKAYVYEELLRKWKS 263
            AE  I++G+KL+S++LSKLKQ L +  K  +YEELLRKWK+
Sbjct: 455  AEVMIEKGIKLTSSSLSKLKQMLNEEKKPILYEELLRKWKA 495


>ref|XP_002532468.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527826|gb|EEF29924.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 510

 Score =  545 bits (1405), Expect = e-152
 Identities = 271/461 (58%), Positives = 334/461 (72%)
 Frame = -3

Query: 1645 KRPTFTSYLQTPNLPPKIKLLCEILANTPPLDVEKSLEDAGVRITTDDVEQVLKLSYGFP 1466
            K PTF SYL+TPNL PKIKLLCEI+A  P   VE  L++ G+ ++  DVEQV+KLSY FP
Sbjct: 50   KHPTFPSYLETPNLSPKIKLLCEIIAKIPSSTVETILDETGLYVSQYDVEQVIKLSYSFP 109

Query: 1465 GPTVKFFRWAGKQLHDNHSPYSWNLVVDLLGKNLLFEAMWDAIKSMKKEGLLSLATFASV 1286
            GP VKFFRWAG +L DNHSPYSWNLVVDLLGKN LF+AMWDAIKSMK + L+SLATFASV
Sbjct: 110  GPAVKFFRWAGFRLQDNHSPYSWNLVVDLLGKNCLFDAMWDAIKSMKSKELVSLATFASV 169

Query: 1285 FSSYVVADRVDEAIMTFEVMDQYGCPRDVIALNSLLSAICREGKTAKARDFLHVVKDKIR 1106
            F SYV A RV +AI TFEVM+QYG  RDV+ALNSLLSAICR+GKT  A DFL V K+ I+
Sbjct: 170  FGSYVTAGRVKDAIFTFEVMNQYGVVRDVVALNSLLSAICRDGKTVDAVDFLFVAKNSIK 229

Query: 1105 PDGDTYAILLEGWEGEGDAVNAHKTFGEMVILFGWDPVNGPAYDAFLNTLLKGHDGAHES 926
            PD DT+AILLEGWE E + VN+ +TF EMV   GWDP N PAYD FL TLL G  G +E 
Sbjct: 230  PDADTFAILLEGWEKELNLVNSRQTFDEMVREIGWDPANTPAYDTFLCTLLMGRIGFNEV 289

Query: 925  MKFFDVMKSNRCFPGMKFFRSALDEFIRTDRTREACALWETMARIKGCRPDTPMYNAMIS 746
            ++F ++MK  RC PGM+FFR+A++E ++ +  R A  +WE M    G RPD  MYN MIS
Sbjct: 290  IEFLEIMKEKRCCPGMRFFRAAIEECLKVNDVRVAGLIWEVMMETNGFRPDIEMYNLMIS 349

Query: 745  LQCYLNKIDVACQLLDDMVFYGAFPDSDTYNIXXXXXXXXXXXRDITVTFNEMLKNECIP 566
            L CY N  D+A + LD+MV+ G FPD  TYN+           ++ +V FNEM+KNEC+P
Sbjct: 350  LYCYTNNTDIALRFLDEMVYNGVFPDRQTYNLLFQFLIKSRKLKEASVLFNEMIKNECLP 409

Query: 565  SQENCTSAITVYVDVGEPDMAIKVWKCMLENEMKGGMETIGNSFIVGLRDLNRLSEARKY 386
            +Q NC++A+ V++   +P MAIKVWKCM+EN  +  +E  GN  IV L DL+   EA KY
Sbjct: 410  NQANCSAAVRVFMHSKDPYMAIKVWKCMIEN-YELDLEETGNLLIVELCDLHMDPEAVKY 468

Query: 385  AEDAIDRGVKLSSNTLSKLKQSLTQLGKAYVYEELLRKWKS 263
            AE  I +G+K++S T+ KLK  L Q  K +VYE LLRKWK+
Sbjct: 469  AESMIGKGIKVTSPTMEKLKLCLKQARKEFVYERLLRKWKA 509


>ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Glycine max]
          Length = 485

 Score =  544 bits (1401), Expect = e-152
 Identities = 271/462 (58%), Positives = 333/462 (72%)
 Frame = -3

Query: 1648 KKRPTFTSYLQTPNLPPKIKLLCEILANTPPLDVEKSLEDAGVRITTDDVEQVLKLSYGF 1469
            KK  TF S+   PNLP  IK LC ++A T    VE SL+ A + +T  DVE+VLKLSYGF
Sbjct: 24   KKPQTFPSFQDIPNLPSNIKSLCHLIATTSAASVEHSLQSAAISVTPHDVEEVLKLSYGF 83

Query: 1468 PGPTVKFFRWAGKQLHDNHSPYSWNLVVDLLGKNLLFEAMWDAIKSMKKEGLLSLATFAS 1289
            PG  VKFFRW+G+ L+DNH+PYSWNLVVD+LGKN  F+AMWDAIKSM KEGLLSLATFAS
Sbjct: 84   PGQAVKFFRWSGRHLNDNHTPYSWNLVVDILGKNRFFDAMWDAIKSMNKEGLLSLATFAS 143

Query: 1288 VFSSYVVADRVDEAIMTFEVMDQYGCPRDVIALNSLLSAICREGKTAKARDFLHVVKDKI 1109
            VFSSYV ADR+ EAIM FE+MD Y   RDV+ALNSLLSAIC  G+T  A D+L V K  +
Sbjct: 144  VFSSYVAADRIREAIMAFEIMDNYCVVRDVVALNSLLSAICSNGRTLDACDYLQVAKKLV 203

Query: 1108 RPDGDTYAILLEGWEGEGDAVNAHKTFGEMVILFGWDPVNGPAYDAFLNTLLKGHDGAHE 929
            RPD DTYAIL+EGWEGE   V A +TF EMVI  GWDP+N PAYD+FL TL++G DG  E
Sbjct: 204  RPDTDTYAILMEGWEGENGVVGAKETFAEMVIEIGWDPLNVPAYDSFLCTLVRGPDGLLE 263

Query: 928  SMKFFDVMKSNRCFPGMKFFRSALDEFIRTDRTREACALWETMARIKGCRPDTPMYNAMI 749
            ++KF D M+  RCFPG++F ++ALDE +++   R A   WE +   K  +P   MYN MI
Sbjct: 264  AIKFVDSMRDRRCFPGVRFLKAALDECVKSHDVRTAEFFWEVLVVGKVVQPTAEMYNLMI 323

Query: 748  SLQCYLNKIDVACQLLDDMVFYGAFPDSDTYNIXXXXXXXXXXXRDITVTFNEMLKNECI 569
             L CY    D A ++LD+MV+ GAFPD +TYN+           R+ +V F EM+KNEC+
Sbjct: 324  GLCCYRGDTDAARRMLDEMVYQGAFPDVETYNLLFKFLIKGRKLREASVVFAEMVKNECV 383

Query: 568  PSQENCTSAITVYVDVGEPDMAIKVWKCMLENEMKGGMETIGNSFIVGLRDLNRLSEARK 389
            P Q+NC +A+  YVD GEP MAIKVWK ++EN  K  +E   N  +VGLRDLNRL EA K
Sbjct: 384  PEQDNCDAAVKAYVDCGEPVMAIKVWKYLVEN-YKKDLERTANFLVVGLRDLNRLPEAVK 442

Query: 388  YAEDAIDRGVKLSSNTLSKLKQSLTQLGKAYVYEELLRKWKS 263
            YAED IDR ++LSSNT+SKL+QSL +  + +VYE+LLRK KS
Sbjct: 443  YAEDMIDREIRLSSNTMSKLRQSLIKERREFVYEDLLRKSKS 484