BLASTX nr result

ID: Cimicifuga21_contig00011328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011328
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283829.1| PREDICTED: uncharacterized protein LOC100242...   117   3e-24
ref|XP_002511182.1| nucleic acid binding protein, putative [Rici...   110   4e-22
ref|XP_002321705.1| predicted protein [Populus trichocarpa] gi|2...   105   7e-21
ref|XP_002318130.1| predicted protein [Populus trichocarpa] gi|2...   105   9e-21
emb|CBI15670.3| unnamed protein product [Vitis vinifera]              103   4e-20

>ref|XP_002283829.1| PREDICTED: uncharacterized protein LOC100242196 [Vitis vinifera]
           gi|147816564|emb|CAN68393.1| hypothetical protein
           VITISV_019529 [Vitis vinifera]
          Length = 169

 Score =  117 bits (292), Expect = 3e-24
 Identities = 76/165 (46%), Positives = 92/165 (55%), Gaps = 12/165 (7%)
 Frame = -1

Query: 664 EENLRELQLLPA----SSSNRLSAWKLESSESSRSKAGDLFDRPXXXXXXXXXXXXXXXX 497
           E++ +ELQLLP+    +SS+R+S    +SS   R   GD F+ P                
Sbjct: 3   EDDQKELQLLPSPHSMASSSRMSGRPSDSSLRYRGIGGDPFEGPGLDLQLSISLRPIRPP 62

Query: 496 SYCVPAKEI--------DMSRVKALKWEAEEQIRLATAEKAYAEQVREMTRREMELAQSE 341
              V A +I        + S V ALKW+A EQIRLA  EKAYAE+VRE+TRREMELAQSE
Sbjct: 63  PEYVLAGQICEYGDVKQEASCVDALKWQAAEQIRLAAMEKAYAERVRELTRREMELAQSE 122

Query: 340 LVRARIMWXXXXXXXXXXXXXXXXATRQIDSTCMEITCQACWRRF 206
             RAR MW                A R+IDSTCMEITCQAC +RF
Sbjct: 123 FARARHMWERAHEEVEKAEKMKEKAMRRIDSTCMEITCQACRQRF 167


>ref|XP_002511182.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223550297|gb|EEF51784.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 179

 Score =  110 bits (274), Expect = 4e-22
 Identities = 75/174 (43%), Positives = 93/174 (53%), Gaps = 21/174 (12%)
 Frame = -1

Query: 664 EENLRELQLLP------ASSSNRLSAWKLESSESSRSKAG-------DLFDRPXXXXXXX 524
           E++ +ELQLLP      +SSS  L +++   S S R ++        + F  P       
Sbjct: 3   EDDHKELQLLPSQQSLASSSSCSLMSFRPPDSNSLRYRSSATVSADHNQFGGPSLDLQLS 62

Query: 523 XXXXXXXXXSYCV--------PAKEIDMSRVKALKWEAEEQIRLATAEKAYAEQVREMTR 368
                    S CV           ++D   V+ALKW+A EQIRLA  EKAYAE+VRE+TR
Sbjct: 63  ISLSPIQAPSNCVLTGPICDFSDGKVDTGCVEALKWQAAEQIRLAAIEKAYAERVRELTR 122

Query: 367 REMELAQSELVRARIMWXXXXXXXXXXXXXXXXATRQIDSTCMEITCQACWRRF 206
           REMELAQSE  RAR MW                ATRQIDSTCMEITCQ+C +RF
Sbjct: 123 REMELAQSEFARARHMWQRAREEAEKAERMKERATRQIDSTCMEITCQSCRQRF 176


>ref|XP_002321705.1| predicted protein [Populus trichocarpa] gi|222868701|gb|EEF05832.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  105 bits (263), Expect = 7e-21
 Identities = 54/88 (61%), Positives = 63/88 (71%)
 Frame = -1

Query: 469 DMSRVKALKWEAEEQIRLATAEKAYAEQVREMTRREMELAQSELVRARIMWXXXXXXXXX 290
           D S V+ALKW+A EQ++LA  EKAYAE+VR++TRREMELAQSE  RAR MW         
Sbjct: 86  DTSCVEALKWQAAEQVKLAAIEKAYAERVRDLTRREMELAQSEFARARHMWQRAREEVEK 145

Query: 289 XXXXXXXATRQIDSTCMEITCQACWRRF 206
                  ATRQIDSTCMEITCQ+C +RF
Sbjct: 146 AERMKEKATRQIDSTCMEITCQSCRQRF 173


>ref|XP_002318130.1| predicted protein [Populus trichocarpa] gi|222858803|gb|EEE96350.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  105 bits (262), Expect = 9e-21
 Identities = 76/175 (43%), Positives = 92/175 (52%), Gaps = 22/175 (12%)
 Frame = -1

Query: 667 MEENL-RELQLLPA--------SSSNRLSAWKLESSESSRSKAGD-----LFDRPXXXXX 530
           MEE   +ELQLLP+        SSS+ +S+  ++SS   R  A D      F  P     
Sbjct: 1   MEEGYQKELQLLPSQLSIAASSSSSSLMSSRPMDSSLRYRPVASDHHQHHQFGGPSLDLQ 60

Query: 529 XXXXXXXXXXXSYCVPAKEI--------DMSRVKALKWEAEEQIRLATAEKAYAEQVREM 374
                      S CV    I        D S V+ LKW+A EQI+LA  EKAYAE+VRE+
Sbjct: 61  LSISVGPIQGPSNCVLTGPICDFSDAKTDTSCVETLKWQAAEQIKLAAIEKAYAERVREL 120

Query: 373 TRREMELAQSELVRARIMWXXXXXXXXXXXXXXXXATRQIDSTCMEITCQACWRR 209
           TRREMELAQSE  +AR MW                ATR+IDSTCMEITCQ+C +R
Sbjct: 121 TRREMELAQSEFAKARHMWQRAREEVEKAESMKEKATRKIDSTCMEITCQSCRQR 175


>emb|CBI15670.3| unnamed protein product [Vitis vinifera]
          Length = 109

 Score =  103 bits (256), Expect = 4e-20
 Identities = 55/86 (63%), Positives = 60/86 (69%)
 Frame = -1

Query: 463 SRVKALKWEAEEQIRLATAEKAYAEQVREMTRREMELAQSELVRARIMWXXXXXXXXXXX 284
           S V ALKW+A EQIRLA  EKAYAE+VRE+TRREMELAQSE  RAR MW           
Sbjct: 22  SCVDALKWQAAEQIRLAAMEKAYAERVRELTRREMELAQSEFARARHMWERAHEEVEKAE 81

Query: 283 XXXXXATRQIDSTCMEITCQACWRRF 206
                A R+IDSTCMEITCQAC +RF
Sbjct: 82  KMKEKAMRRIDSTCMEITCQACRQRF 107


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