BLASTX nr result

ID: Cimicifuga21_contig00011314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011314
         (192 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD45217.1| root hair defective 3 GTP-binding protein-like [...    68   9e-10
gb|EEE54847.1| hypothetical protein OsJ_02311 [Oryza sativa Japo...    68   9e-10
gb|EEC70935.1| hypothetical protein OsI_02526 [Oryza sativa Indi...    68   9e-10
ref|NP_001043388.1| Os01g0575000 [Oryza sativa Japonica Group] g...    68   9e-10
ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...    67   2e-09

>dbj|BAD45217.1| root hair defective 3 GTP-binding protein-like [Oryza sativa
           Japonica Group]
          Length = 524

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/61 (59%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
 Frame = -2

Query: 191 NTLSDALLDS-----TVTSATSFDPLTLSTWEEVPSIKTFITPAQCKSMWRDFKAEMERL 27
           NTLS AL+D+     T  S  SFDPL  S+WE VP  KT ITP QCKS+WR FKAE E  
Sbjct: 317 NTLSLALVDTARPGTTDRSIQSFDPLASSSWERVPEEKTLITPVQCKSLWRQFKAETEYT 376

Query: 26  V 24
           V
Sbjct: 377 V 377


>gb|EEE54847.1| hypothetical protein OsJ_02311 [Oryza sativa Japonica Group]
          Length = 806

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/61 (59%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
 Frame = -2

Query: 191 NTLSDALLDS-----TVTSATSFDPLTLSTWEEVPSIKTFITPAQCKSMWRDFKAEMERL 27
           NTLS AL+D+     T  S  SFDPL  S+WE VP  KT ITP QCKS+WR FKAE E  
Sbjct: 599 NTLSLALVDTARPGTTDRSIQSFDPLASSSWERVPEEKTLITPVQCKSLWRQFKAETEYT 658

Query: 26  V 24
           V
Sbjct: 659 V 659


>gb|EEC70935.1| hypothetical protein OsI_02526 [Oryza sativa Indica Group]
          Length = 806

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/61 (59%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
 Frame = -2

Query: 191 NTLSDALLDS-----TVTSATSFDPLTLSTWEEVPSIKTFITPAQCKSMWRDFKAEMERL 27
           NTLS AL+D+     T  S  SFDPL  S+WE VP  KT ITP QCKS+WR FKAE E  
Sbjct: 599 NTLSLALVDTARPGTTDRSIQSFDPLASSSWERVPEEKTLITPVQCKSLWRQFKAETEYT 658

Query: 26  V 24
           V
Sbjct: 659 V 659


>ref|NP_001043388.1| Os01g0575000 [Oryza sativa Japonica Group]
           gi|122228672|sp|Q0JLS6.1|RHD3_ORYSJ RecName:
           Full=Protein ROOT HAIR DEFECTIVE 3; AltName:
           Full=Protein SEY1 homolog 1 gi|113532919|dbj|BAF05302.1|
           Os01g0575000 [Oryza sativa Japonica Group]
          Length = 806

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/61 (59%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
 Frame = -2

Query: 191 NTLSDALLDS-----TVTSATSFDPLTLSTWEEVPSIKTFITPAQCKSMWRDFKAEMERL 27
           NTLS AL+D+     T  S  SFDPL  S+WE VP  KT ITP QCKS+WR FKAE E  
Sbjct: 599 NTLSLALVDTARPGTTDRSIQSFDPLASSSWERVPEEKTLITPVQCKSLWRQFKAETEYT 658

Query: 26  V 24
           V
Sbjct: 659 V 659


>ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Vitis
           vinifera]
          Length = 871

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/58 (58%), Positives = 39/58 (67%), Gaps = 5/58 (8%)
 Frame = -2

Query: 191 NTLSDALLDS-----TVTSATSFDPLTLSTWEEVPSIKTFITPAQCKSMWRDFKAEME 33
           NTLS AL+D+     T  S T+ DPL  STWEEVP  KT ITP QCK++WR FK E E
Sbjct: 661 NTLSAALVDNVKSAVTNRSITTVDPLASSTWEEVPPSKTLITPVQCKNLWRQFKMETE 718


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