BLASTX nr result

ID: Cimicifuga21_contig00011307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011307
         (1509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221...    55   2e-10
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                  55   2e-10
ref|XP_002263548.1| PREDICTED: uncharacterized protein LOC100251...    47   1e-09
emb|CAN76529.1| hypothetical protein VITISV_024125 [Vitis vinifera]    48   2e-09
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]    46   4e-09

>ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221994 [Cucumis sativus]
          Length = 1544

 Score = 55.1 bits (131), Expect(2) = 2e-10
 Identities = 33/90 (36%), Positives = 48/90 (53%)
 Frame = +3

Query: 1062 DSLKRDLKADFIIPTYEMDLSYNVQDLSQGFKQVREYTHEF*VLSSRLPNSERK*TKVGR 1241
            + +K+ LKA F+ P YE  L    Q+  QG + V EY  EF  LS+R   SE +  +V R
Sbjct: 314  EKMKKLLKARFLPPNYEQTLYNQYQNCRQGVRTVAEYIEEFHRLSARTNLSENEQHQVAR 373

Query: 1242 YVQGLKKSI*AQITFSHIHTLSESFHFARS 1331
            +V GL+  I  ++       LSE+  FA +
Sbjct: 374  FVGGLRFDIKEKVRLQPFRFLSEAISFAET 403



 Score = 38.1 bits (87), Expect(2) = 2e-10
 Identities = 15/53 (28%), Positives = 32/53 (60%)
 Frame = +2

Query: 860  VKLDVSVFGGSQDPDVFIDWLERIEAIFAFKNFSDPKRVLLVETRLKGYALHW 1018
            +K+D+ ++ G ++ + F+DW++  E  F + +  + K+V LV  +L+  A  W
Sbjct: 242  MKIDLPMYDGKRNIEAFLDWIKSTENFFNYMDTPERKKVHLVALKLRAGASAW 294


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score = 55.1 bits (131), Expect(2) = 2e-10
 Identities = 25/71 (35%), Positives = 38/71 (53%)
 Frame = +2

Query: 824  LVRQLHRSRTNDVKLDVSVFGGSQDPDVFIDWLERIEAIFAFKNFSDPKRVLLVETRLKG 1003
            +    H     D+K+++  F GS +P+  +DW   IE +F FK +SD K   +   +LKG
Sbjct: 76   MAEAFHGEPNKDLKVEIPDFHGSLNPEDLLDWFRTIERVFEFKGYSDGKAFKVAILKLKG 135

Query: 1004 YALHW*KNCIN 1036
            YA  W +N  N
Sbjct: 136  YASLWYENLKN 146



 Score = 37.7 bits (86), Expect(2) = 2e-10
 Identities = 21/86 (24%), Positives = 40/86 (46%)
 Frame = +3

Query: 1068 LKRDLKADFIIPTYEMDLSYNVQDLSQGFKQVREYTHEF*VLSSRLPNSERK*TKVGRYV 1247
            LK+ L   FI   Y  D+   +  L Q  + +  Y  +F  L+ +   +E+   K+ R+V
Sbjct: 162  LKKKLNEKFIPKEYTQDIFIKLTQLKQDQQPLESYLRDFEQLTLQCELNEKPEQKIARFV 221

Query: 1248 QGLKKSI*AQITFSHIHTLSESFHFA 1325
            +GL   I  ++    + +  E+ + A
Sbjct: 222  EGLDTKIAHRVRMQQVWSFDEAVNLA 247


>ref|XP_002263548.1| PREDICTED: uncharacterized protein LOC100251357 [Vitis vinifera]
          Length = 328

 Score = 47.4 bits (111), Expect(2) = 1e-09
 Identities = 18/54 (33%), Positives = 33/54 (61%)
 Frame = +2

Query: 857  DVKLDVSVFGGSQDPDVFIDWLERIEAIFAFKNFSDPKRVLLVETRLKGYALHW 1018
            ++K+ +  F G  DP+V+++W +++E IF   N+S+ K+V L       YA+ W
Sbjct: 84   NIKMKIPSFQGKNDPEVYLEWEKKVEFIFKCHNYSNEKKVKLAVIEFTDYAIIW 137



 Score = 43.1 bits (100), Expect(2) = 1e-09
 Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 16/158 (10%)
 Frame = +3

Query: 1062 DSLKRDLKADFIIPTYEMDLSYNVQDLSQGFKQVREYTHEF*VLSSRLPNSERK*TKVGR 1241
            + +K  ++  F++  Y  DL   +Q L+QG++ V +Y  +  +   R    E +   + R
Sbjct: 157  EKMKATMRKRFVLSHYYRDLYKKLQSLTQGYRSVDDYHKKMDIAMIRANVEEDREATMAR 216

Query: 1242 YVQGLKKSI*AQITFSHIHTLSESFHFA------------RSFAFPKYIYYCFHNRCRCF 1385
            ++ GL + I   +   H   L +  H              RSF  P        N  +  
Sbjct: 217  FLNGLNQDIANVVELQHYVELEDMVHMVIKMERQLKRKGTRSFQNPGSSASWRPNGRKNE 276

Query: 1386 *PFVKSKDSGVCYNCEEP----GHKPNQCPKKKRLSLC 1487
                KSK        E P    GH  +QCP K+ +  C
Sbjct: 277  GVVFKSKTKPPKRRDEAPNVNKGHIASQCPNKRTMIAC 314


>emb|CAN76529.1| hypothetical protein VITISV_024125 [Vitis vinifera]
          Length = 511

 Score = 47.8 bits (112), Expect(2) = 2e-09
 Identities = 28/88 (31%), Positives = 42/88 (47%)
 Frame = +3

Query: 1062 DSLKRDLKADFIIPTYEMDLSYNVQDLSQGFKQVREYTHEF*VLSSRLPNSERK*TKVGR 1241
            D +K  +K  F++  YE  +   +  L QG K V EYT EF  LS R    E       R
Sbjct: 170  DEMKLKMKEHFLLTDYEQLMYTKLFSLKQGTKSVEEYTEEFHELSIRNQVQESDAQLAAR 229

Query: 1242 YVQGLKKSI*AQITFSHIHTLSESFHFA 1325
            Y  GL+  I  ++  +H +T+ + +  A
Sbjct: 230  YKAGLRMEIQLEMINAHTYTVDDVYQLA 257



 Score = 42.0 bits (97), Expect(2) = 2e-09
 Identities = 21/62 (33%), Positives = 34/62 (54%)
 Frame = +2

Query: 851  TNDVKLDVSVFGGSQDPDVFIDWLERIEAIFAFKNFSDPKRVLLVETRLKGYALHW*KNC 1030
            T  V+L+V+ F G  +P  F+DW+  +E  F +    + ++V  V+ +LKG A  W  N 
Sbjct: 95   TKKVRLEVAEFYGKLNPTTFLDWIMSMEDYFDWCAMPENRKVHFVKAKLKGAARLWWHNI 154

Query: 1031 IN 1036
             N
Sbjct: 155  EN 156


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score = 45.8 bits (107), Expect(2) = 4e-09
 Identities = 28/88 (31%), Positives = 41/88 (46%)
 Frame = +3

Query: 1062 DSLKRDLKADFIIPTYEMDLSYNVQDLSQGFKQVREYTHEF*VLSSRLPNSERK*TKVGR 1241
            D +K  +K  F+   YE  +   +  L QG K V EYT EF  LS R    E       R
Sbjct: 160  DEMKLKMKEHFLPTDYEQLMYTKLFSLKQGTKSVEEYTEEFHELSIRNQVXESDAQLAAR 219

Query: 1242 YVQGLKKSI*AQITFSHIHTLSESFHFA 1325
            Y  GL+  I  ++  +H +T+ + +  A
Sbjct: 220  YKAGLRMEIQLEMIAAHTYTVDDVYQLA 247



 Score = 42.7 bits (99), Expect(2) = 4e-09
 Identities = 21/62 (33%), Positives = 34/62 (54%)
 Frame = +2

Query: 851  TNDVKLDVSVFGGSQDPDVFIDWLERIEAIFAFKNFSDPKRVLLVETRLKGYALHW*KNC 1030
            T  V+L+V+ F G  +P  F+DW+  +E  F +    + ++V  V+ +LKG A  W  N 
Sbjct: 85   TKKVRLEVAEFYGKLNPTAFLDWIMSMEDYFDWYAMPENRKVRFVKAKLKGAARLWWHNI 144

Query: 1031 IN 1036
             N
Sbjct: 145  EN 146


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